BLASTX nr result

ID: Bupleurum21_contig00015120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015120
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyr...   426   e-117
ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis...   426   e-117
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   424   e-116
ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   422   e-116
ref|XP_003536037.1| PREDICTED: ABC transporter I family member 2...   421   e-115

>ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297318882|gb|EFH49304.1| non-intrinsic abc protein 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score =  426 bits (1094), Expect = e-117
 Identities = 205/258 (79%), Positives = 229/258 (88%)
 Frame = +3

Query: 105 VSTEENSTTPTVVINNLRFTYPGIDGHPPPGSKPLIQDFSLTLNPSNRCLLVGANGAGKT 284
           V+ EE     TV I+ LRFTYPGIDGHPPPGSKPLI+DFS+TLN S+RCLLVG+NGAGKT
Sbjct: 3   VTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKT 62

Query: 285 TILKILGGKHMVDPDMVRVMGRSAFHDTALTSSAQLCYLGGEWRREVAFAGFDVPIQMDI 464
           TILKILGGKHMV+P MVRV+GRSAFHDT LTSS  LCYLGGEWRR+VAFAGF+VPIQMDI
Sbjct: 63  TILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDI 122

Query: 465 SAEKMINGVSGVDPQRRDELLKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPYKVLLLDE 644
           SAEKMI GV+G+DPQRRDEL+KVLD+D+SWRLHKVSDGQRRRVQICMGLLKP+KVLLLDE
Sbjct: 123 SAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDE 182

Query: 645 ITXXXXXXXXXXXXSFLKKDCEQRGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMD 824
           IT             FL+K+CE+RGATIIYATHIFDGLE+WP++IVYVAHGKLQLA+PM+
Sbjct: 183 ITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLALPME 242

Query: 825 KVKEISKLSLMRTVESWL 878
           KVKE SK SLMRTVESWL
Sbjct: 243 KVKETSKKSLMRTVESWL 260


>ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis thaliana]
           gi|75335697|sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC
           transporter I family member 20; Short=ABC transporter
           ABCI.20; Short=AtABCI20; AltName: Full=GCN-related
           protein 3; AltName: Full=Non-intrinsic ABC protein 9
           gi|13899119|gb|AAK48981.1|AF370554_1 ABC
           transporter-like protein [Arabidopsis thaliana]
           gi|7406423|emb|CAB85532.1| ABC transporter-like protein
           [Arabidopsis thaliana] gi|21554262|gb|AAM63337.1| ABC
           transporter-like protein [Arabidopsis thaliana]
           gi|30984550|gb|AAP42738.1| At5g02270 [Arabidopsis
           thaliana] gi|332003069|gb|AED90452.1| ABC transporter I
           family member 20 [Arabidopsis thaliana]
          Length = 328

 Score =  426 bits (1094), Expect = e-117
 Identities = 205/258 (79%), Positives = 229/258 (88%)
 Frame = +3

Query: 105 VSTEENSTTPTVVINNLRFTYPGIDGHPPPGSKPLIQDFSLTLNPSNRCLLVGANGAGKT 284
           V+ EE     TV I+ LRFTYPGIDGHPPPGSKPLI+DFS+TLN S+RCLLVG+NGAGKT
Sbjct: 3   VTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKT 62

Query: 285 TILKILGGKHMVDPDMVRVMGRSAFHDTALTSSAQLCYLGGEWRREVAFAGFDVPIQMDI 464
           TILKILGGKHMV+P MVRV+GRSAFHDT LTSS  LCYLGGEWRR+VAFAGF+VPIQMDI
Sbjct: 63  TILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDI 122

Query: 465 SAEKMINGVSGVDPQRRDELLKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPYKVLLLDE 644
           SAEKMI GV+G+DPQRRDEL+KVLD+D+SWRLHKVSDGQRRRVQICMGLLKP+KVLLLDE
Sbjct: 123 SAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDE 182

Query: 645 ITXXXXXXXXXXXXSFLKKDCEQRGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMD 824
           IT             FL+K+CE+RGATIIYATHIFDGLE+WP+HIVYVA+GKLQLA+PM+
Sbjct: 183 ITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPME 242

Query: 825 KVKEISKLSLMRTVESWL 878
           KVKE SK SLMRTVESWL
Sbjct: 243 KVKETSKKSLMRTVESWL 260


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  424 bits (1091), Expect = e-116
 Identities = 205/249 (82%), Positives = 223/249 (89%)
 Frame = +3

Query: 132 PTVVINNLRFTYPGIDGHPPPGSKPLIQDFSLTLNPSNRCLLVGANGAGKTTILKILGGK 311
           PTV INNLRFTYPGIDG PPPGS PLI  FSLTLN  +RCLLVG+NGAGKTTILKILGGK
Sbjct: 9   PTVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGK 68

Query: 312 HMVDPDMVRVMGRSAFHDTALTSSAQLCYLGGEWRREVAFAGFDVPIQMDISAEKMINGV 491
           HMV+P MVRV+GRSAFHDTALTSS  LCYLGGEWRR+VAFAGF+VPIQMD+SAEKMI GV
Sbjct: 69  HMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGV 128

Query: 492 SGVDPQRRDELLKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPYKVLLLDEITXXXXXXX 671
           SG+DPQRR EL+KVLD+DLSWRLHKVSDGQRRRVQICMGLLKP+KVLLLDEIT       
Sbjct: 129 SGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLA 188

Query: 672 XXXXXSFLKKDCEQRGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISKLS 851
                 FL+K+CE+RGATIIYATHIFDGLENWPSH+VYVAHGKLQLAMPM+KV+E+S LS
Sbjct: 189 RADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSNLS 248

Query: 852 LMRTVESWL 878
           LMRTVESWL
Sbjct: 249 LMRTVESWL 257


>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
           vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
           product [Vitis vinifera]
          Length = 329

 Score =  422 bits (1084), Expect = e-116
 Identities = 204/248 (82%), Positives = 222/248 (89%)
 Frame = +3

Query: 135 TVVINNLRFTYPGIDGHPPPGSKPLIQDFSLTLNPSNRCLLVGANGAGKTTILKILGGKH 314
           TV INNLRFTYPGIDG PPPGS PLI  FSLTLN  +RCLLVG+NGAGKTTILKILGGKH
Sbjct: 10  TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 315 MVDPDMVRVMGRSAFHDTALTSSAQLCYLGGEWRREVAFAGFDVPIQMDISAEKMINGVS 494
           MV+P MVRV+GRSAFHDTALTSS  LCYLGGEWRR+VAFAGF+VPIQMD+SAEKMI GVS
Sbjct: 70  MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVS 129

Query: 495 GVDPQRRDELLKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPYKVLLLDEITXXXXXXXX 674
           G+DPQRR EL+KVLD+DLSWRLHKVSDGQRRRVQICMGLLKP+KVLLLDEIT        
Sbjct: 130 GIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 189

Query: 675 XXXXSFLKKDCEQRGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISKLSL 854
                FL+K+CE+RGATIIYATHIFDGLENWPSH+VYVAHGKLQLAMPM+KV+E+S LSL
Sbjct: 190 ADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSNLSL 249

Query: 855 MRTVESWL 878
           MRTVESWL
Sbjct: 250 MRTVESWL 257


>ref|XP_003536037.1| PREDICTED: ABC transporter I family member 20-like [Glycine max]
          Length = 333

 Score =  421 bits (1081), Expect = e-115
 Identities = 202/256 (78%), Positives = 227/256 (88%)
 Frame = +3

Query: 111 TEENSTTPTVVINNLRFTYPGIDGHPPPGSKPLIQDFSLTLNPSNRCLLVGANGAGKTTI 290
           T  +S   T+VI +LRFTYPGIDGHPPPGS PLIQDF+LTL+  +RCLLVG+NGAGKTT+
Sbjct: 6   THSDSKAATIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCLLVGSNGAGKTTL 65

Query: 291 LKILGGKHMVDPDMVRVMGRSAFHDTALTSSAQLCYLGGEWRREVAFAGFDVPIQMDISA 470
           LKILGGKH+V+PDMVRV+GRSAFHDT L SS  LCYLGGEWRR+VAFAGF+VPIQMDISA
Sbjct: 66  LKILGGKHLVEPDMVRVLGRSAFHDTTLISSGDLCYLGGEWRRDVAFAGFEVPIQMDISA 125

Query: 471 EKMINGVSGVDPQRRDELLKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPYKVLLLDEIT 650
           +KMI GV G+DPQRR EL+KVLD+DLSWRLHKVSDGQRRRVQICMGLLKP+KVLLLDEIT
Sbjct: 126 QKMIFGVPGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEIT 185

Query: 651 XXXXXXXXXXXXSFLKKDCEQRGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKV 830
                        FL+K+C++RGATIIYATHIFDGLE+WP++IVYVAHGKLQLAMPMDKV
Sbjct: 186 VDLDVLARADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKV 245

Query: 831 KEISKLSLMRTVESWL 878
           KEISKLSLMRTVESWL
Sbjct: 246 KEISKLSLMRTVESWL 261


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