BLASTX nr result

ID: Bupleurum21_contig00015094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015094
         (1320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|2...   328   8e-98
ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ...   320   2e-97
ref|XP_003535279.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ...   307   1e-92
ref|XP_003590389.1| 3-deoxy-D-manno-octulosonic-acid transferase...   301   1e-89
ref|XP_002871057.1| hypothetical protein ARALYDRAFT_325028 [Arab...   296   3e-87

>ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|222867530|gb|EEF04661.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  328 bits (841), Expect(2) = 8e-98
 Identities = 158/270 (58%), Positives = 213/270 (78%), Gaps = 1/270 (0%)
 Frame = -1

Query: 1218 WSTPVVLQMMKLMLSKFSLIVPLSNMQAVHFQLLQAPPFCINFAGDLKFALADFVSSNRD 1039
            WS+PV+  ++ L+LSKFSLI+PLS+MQA+HFQLLQAPPF INFAGDLK+ + ++ +S  +
Sbjct: 173  WSSPVLFPLISLLLSKFSLIIPLSSMQAIHFQLLQAPPFIINFAGDLKYVV-EYDASKEE 231

Query: 1038 TKVLDDLKIQVS-RPVWLASSIHKGEEEVIIGVHKMLKKIHSDIITIVVPRHPQFGREIT 862
             + +DDLK+Q+  R VW+ASSIH+GEEEV++GVHK+LK+++ D++TI+VPR+PQ G++I 
Sbjct: 232  FRSIDDLKVQLGHRKVWMASSIHRGEEEVMLGVHKVLKQVYPDLVTIIVPRYPQHGKDIA 291

Query: 861  HEWRKEGLSVAVRSNYDKLMPQTDIYMVDTLGELRSFYRITPIAVVGGSFMPGSSGHNIS 682
             + +KEG  VA+RS + +++P  +IY+VDTLGELR  YR+TPIAV+GGSF PG +GHNIS
Sbjct: 292  QKLQKEGQHVALRSQHQRIVPGRNIYVVDTLGELRHLYRLTPIAVIGGSFFPGLAGHNIS 351

Query: 681  EAAAAGCAVLTGLHVGHFLNMVTEMQRINHLSVHQVSGKAELCEVLTKLFSXXXXXXXXX 502
            EAAAAGCAVLTG HVGHF +M+ EMQR+N LSV QV+GK EL E + K FS         
Sbjct: 352  EAAAAGCAVLTGYHVGHFSHMLREMQRLNPLSVLQVAGKLELEEAILKFFSDGKVLEARQ 411

Query: 501  XXAKQAYHTLSNGVGENVWNLLDCHVFRKA 412
              +KQA+H LSNG+  N WN+L  HV ++A
Sbjct: 412  TASKQAFHALSNGIIANAWNVLYFHVLKQA 441



 Score = 57.0 bits (136), Expect(2) = 8e-98
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = -3

Query: 1318 MDSFLGYWKPNAVVLMESELWPNLVMSAARNGELV 1214
            MD+FL YW PNA++L+ESELWPNL+M+++R G L+
Sbjct: 124  MDAFLDYWNPNAIMLLESELWPNLIMASSRKGILL 158


>ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis
            vinifera]
          Length = 441

 Score =  320 bits (820), Expect(2) = 2e-97
 Identities = 164/270 (60%), Positives = 211/270 (78%), Gaps = 1/270 (0%)
 Frame = -1

Query: 1218 WSTPVVLQMMKLMLSKFSLIVPLSNMQAVHFQLLQAPPFCINFAGDLKFALADFVSSNRD 1039
            WS PV+L ++ LMLSKFSLIVPLS MQ + FQLLQAPP+ INF+GDLK+ + +F  S R 
Sbjct: 171  WSRPVLLPLISLMLSKFSLIVPLSTMQGIRFQLLQAPPYVINFSGDLKYTVEEFDISKRG 230

Query: 1038 TKVLDDLKIQVS-RPVWLASSIHKGEEEVIIGVHKMLKKIHSDIITIVVPRHPQFGREIT 862
             + +++LK+Q++ R VW+ SSIH+GEEEV++GVHK+L ++H D++TI+VPR+PQ GREI 
Sbjct: 231  VQSIEELKVQLAHRRVWMVSSIHRGEEEVMLGVHKVLMRMHPDMVTIIVPRYPQHGREIA 290

Query: 861  HEWRKEGLSVAVRSNYDKLMPQTDIYMVDTLGELRSFYRITPIAVVGGSFMPGSSGHNIS 682
             E +KEGLSVA+RS  +KL+  T IY+VDTLGELR FY +TPIAV+GGSF+PG +GHNIS
Sbjct: 291  IELQKEGLSVALRSRDEKLVSGTSIYVVDTLGELRHFYTLTPIAVIGGSFLPGLTGHNIS 350

Query: 681  EAAAAGCAVLTGLHVGHFLNMVTEMQRINHLSVHQVSGKAELCEVLTKLFSXXXXXXXXX 502
            EAAAAGCAVLTG HVGHF +MV +MQR N LSV QVS + EL E L++LFS         
Sbjct: 351  EAAAAGCAVLTGHHVGHFSDMVLKMQRSNPLSVLQVSAE-ELEEALSQLFSNSEILEARC 409

Query: 501  XXAKQAYHTLSNGVGENVWNLLDCHVFRKA 412
              AKQA+ TLS+G+  NVWN L+ +V R+A
Sbjct: 410  LAAKQAFQTLSSGIVANVWNQLNFNVLRQA 439



 Score = 63.5 bits (153), Expect(2) = 2e-97
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 1318 MDSFLGYWKPNAVVLMESELWPNLVMSAARNG 1223
            MD+FLGYWKPNAV+LME ELWPNL++ AARNG
Sbjct: 122  MDAFLGYWKPNAVMLMECELWPNLILGAARNG 153


>ref|XP_003535279.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase-like [Glycine
            max]
          Length = 449

 Score =  307 bits (787), Expect(2) = 1e-92
 Identities = 155/271 (57%), Positives = 200/271 (73%), Gaps = 1/271 (0%)
 Frame = -1

Query: 1218 WSTPVVLQMMKLMLSKFSLIVPLSNMQAVHFQLLQAPPFCINFAGDLKFALADFVSSNRD 1039
            WS PV+L ++ LMLSKFSLIVPLS  Q + FQLLQAPP+ INF+GDLK+ + DF  + R 
Sbjct: 170  WSRPVLLPLISLMLSKFSLIVPLSTEQGIRFQLLQAPPYIINFSGDLKYVIEDFGVNERG 229

Query: 1038 TKVLDDLKIQVS-RPVWLASSIHKGEEEVIIGVHKMLKKIHSDIITIVVPRHPQFGREIT 862
               +D+L+++++ + VW+ASSIH GEEE+I+GVH  L +   + +TI+VPRHPQ GREI 
Sbjct: 230  RIDIDNLRLELTQKKVWMASSIHSGEEEIILGVHNALMQQQPNTMTIIVPRHPQEGREIA 289

Query: 861  HEWRKEGLSVAVRSNYDKLMPQTDIYMVDTLGELRSFYRITPIAVVGGSFMPGSSGHNIS 682
             +  KEG +V +RS  +K  P TDIY+VDTLGELR  Y +TPIAV+GGS +PG SGHNIS
Sbjct: 290  KKLEKEGQNVVLRSQNEKFKPGTDIYVVDTLGELRLLYTLTPIAVIGGSLLPGLSGHNIS 349

Query: 681  EAAAAGCAVLTGLHVGHFLNMVTEMQRINHLSVHQVSGKAELCEVLTKLFSXXXXXXXXX 502
            EAAAAGCAVLTG H+GHF +MV EMQR N LSVHQVSGK EL + L +LF+         
Sbjct: 350  EAAAAGCAVLTGCHIGHFSHMVLEMQRSNPLSVHQVSGKLELEKALIELFTNATLLEARR 409

Query: 501  XXAKQAYHTLSNGVGENVWNLLDCHVFRKAS 409
              AK+A+  LS G+ EN+W+LL+ H+F + S
Sbjct: 410  RAAKEAFCQLSCGIVENIWSLLNFHIFCRLS 440



 Score = 60.5 bits (145), Expect(2) = 1e-92
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -3

Query: 1312 SFLGYWKPNAVVLMESELWPNLVMSAARNG 1223
            SFL YWKPNA+VLMESELWPNL+M A+RNG
Sbjct: 123  SFLDYWKPNAIVLMESELWPNLIMDASRNG 152


>ref|XP_003590389.1| 3-deoxy-D-manno-octulosonic-acid transferase [Medicago truncatula]
            gi|355479437|gb|AES60640.1|
            3-deoxy-D-manno-octulosonic-acid transferase [Medicago
            truncatula]
          Length = 510

 Score =  301 bits (771), Expect(2) = 1e-89
 Identities = 150/269 (55%), Positives = 202/269 (75%), Gaps = 1/269 (0%)
 Frame = -1

Query: 1218 WSTPVVLQMMKLMLSKFSLIVPLSNMQAVHFQLLQAPPFCINFAGDLKFALADFVSSNRD 1039
            WS PV+L ++ LMLSKFSLIVPLS  Q + FQLLQAPP+ INF+GDLK+ + DF  +   
Sbjct: 169  WSGPVLLPLISLMLSKFSLIVPLSTEQGIRFQLLQAPPYIINFSGDLKYVIEDFGVNECG 228

Query: 1038 TKVLDDLKIQVS-RPVWLASSIHKGEEEVIIGVHKMLKKIHSDIITIVVPRHPQFGREIT 862
               +D+L+ Q+S + VW+ASSIH+GEEE+I GVH +L ++  +I+TI+VPRHPQ GREI 
Sbjct: 229  RMNIDNLRQQLSHKQVWMASSIHRGEEEIISGVHNVLMQLRPNIMTIIVPRHPQQGREIA 288

Query: 861  HEWRKEGLSVAVRSNYDKLMPQTDIYMVDTLGELRSFYRITPIAVVGGSFMPGSSGHNIS 682
             +  ++G  V +RS +++  P+T+IY+VDTLGELR  Y +TPIAV+GGSF+PG SGHNIS
Sbjct: 289  KKLERQGHYVVLRSQHERFKPETNIYVVDTLGELRQMYTLTPIAVIGGSFLPGLSGHNIS 348

Query: 681  EAAAAGCAVLTGLHVGHFLNMVTEMQRINHLSVHQVSGKAELCEVLTKLFSXXXXXXXXX 502
            EAAAAGCA+LTG HVGHF +MV EMQ++N LSV QVSGK EL + LT+LF+         
Sbjct: 349  EAAAAGCAILTGRHVGHFSHMVLEMQQLNPLSVLQVSGKLELEKSLTELFTNTTLLEARR 408

Query: 501  XXAKQAYHTLSNGVGENVWNLLDCHVFRK 415
              AK+A+  LS+ +  N+W+LL+ H+F +
Sbjct: 409  RAAKEAFCMLSSDIVANIWSLLNFHIFTR 437



 Score = 57.0 bits (136), Expect(2) = 1e-89
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -3

Query: 1312 SFLGYWKPNAVVLMESELWPNLVMSAARNG 1223
            SFL YWKP+A+VLMESELWPNL+M A++NG
Sbjct: 122  SFLHYWKPSAIVLMESELWPNLIMDASKNG 151


>ref|XP_002871057.1| hypothetical protein ARALYDRAFT_325028 [Arabidopsis lyrata subsp.
            lyrata] gi|297316894|gb|EFH47316.1| hypothetical protein
            ARALYDRAFT_325028 [Arabidopsis lyrata subsp. lyrata]
          Length = 439

 Score =  296 bits (759), Expect(2) = 3e-87
 Identities = 146/269 (54%), Positives = 199/269 (73%), Gaps = 2/269 (0%)
 Frame = -1

Query: 1218 WSTPVVLQMMKLMLSKFSLIVPLSNMQAVHFQLLQAPPFCINFAGDLKFALADFVSSNRD 1039
            WS+P++L ++ L+LSKFSLI PLS +Q +HFQLL APPF IN++GDLK+ +  F +S+  
Sbjct: 169  WSSPLLLPLVSLLLSKFSLIAPLSTLQGIHFQLLHAPPFVINYSGDLKYVVNKFNASSGT 228

Query: 1038 TKVLDDLKIQVSR-PVWLASSIHKGEEEVIIGVHKMLKKIHSDIITIVVPRHPQFGREIT 862
            ++ + DLK+++S   VW+ASS+H+GEEEVI+GVH ML + H D + I+VPRHP  G++I 
Sbjct: 229  SESIRDLKVELSEMKVWIASSLHRGEEEVILGVHNMLLESHPDSVVIIVPRHPHHGQQIA 288

Query: 861  HEWRKEGLSVAVRSNYDKLMPQ-TDIYMVDTLGELRSFYRITPIAVVGGSFMPGSSGHNI 685
            H+ RK+G SVA+RS  +KL  + T+IY+VDTLGELR  Y + PIAV+GGSF+PG +GHN+
Sbjct: 289  HKLRKDGQSVALRSQNEKLTSRKTNIYVVDTLGELRELYSVAPIAVIGGSFIPGLTGHNL 348

Query: 684  SEAAAAGCAVLTGLHVGHFLNMVTEMQRINHLSVHQVSGKAELCEVLTKLFSXXXXXXXX 505
            SEAAAAGCAV+TG HVGHF +MV  MQ+ N LSV QVS K EL E +  L S        
Sbjct: 349  SEAAAAGCAVITGCHVGHFSHMVKAMQQSNPLSVTQVSTKLELKEAVDLLLSNPEILETQ 408

Query: 504  XXXAKQAYHTLSNGVGENVWNLLDCHVFR 418
               +K+ Y +LS+ +  N+WNLL+ H+FR
Sbjct: 409  QRASKEVYESLSSCIITNIWNLLNLHIFR 437



 Score = 53.5 bits (127), Expect(2) = 3e-87
 Identities = 19/29 (65%), Positives = 28/29 (96%)
 Frame = -3

Query: 1318 MDSFLGYWKPNAVVLMESELWPNLVMSAA 1232
            +D FLG+WKPNA+++ME+ELWPNL+M+A+
Sbjct: 120  IDRFLGHWKPNAIIIMENELWPNLIMAAS 148


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