BLASTX nr result
ID: Bupleurum21_contig00015083
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00015083 (1131 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2... 294 2e-77 ref|XP_002316790.1| predicted protein [Populus trichocarpa] gi|2... 292 1e-76 ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy... 292 1e-76 gb|AFK42884.1| unknown [Lotus japonicus] 287 3e-75 gb|ABK22180.1| unknown [Picea sitchensis] 287 3e-75 >ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa] Length = 307 Score = 294 bits (753), Expect = 2e-77 Identities = 166/305 (54%), Positives = 202/305 (66%), Gaps = 11/305 (3%) Frame = -3 Query: 1108 VAITGEVTVETAAGNVASSSPTTQSGQDCVNVVSVTXXXXXXXXXXXXXXXEITDWLSKL 929 +A E+T E A VAS++ TT + ++ N + ++ D +KL Sbjct: 1 MAAVAEITSEAA---VASNNTTTAANKNDNN--NNLDSETKPTSESEFTVQKLVDMFTKL 55 Query: 928 NPLAKEFVPSANATDQNQD-----------QSAVXXXXXXXXXXXXXXXXRMTARAVRAQ 782 NPLAKEF PS+ + + + QSA ++ RA RAQ Sbjct: 56 NPLAKEFFPSSYSKNNPNELHFNNFAVPVKQSANDNFPKRKRNNFNQGRRKLNGRAYRAQ 115 Query: 781 REDCIRRTVYVSDIDHLVSEELLAYVFSCCGLVSDCRICGDPRSPLRFAFVEFKEEYAAR 602 +ED IRRTVYVSDID V+EE LA +FS CG V DCR+CGDP S LRFAFVEF +E AR Sbjct: 116 QEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVDCRVCGDPHSVLRFAFVEFADEQGAR 175 Query: 601 AALNLTGALLGVFPIKVLPSKTAILPVNPRYLPRSEDDIEKASRTVYCTNIDKKVTTEDV 422 AALNL G +LG +P++VLPSKTAILPVNP +LPRSED+ E +RTVYCTNIDKKV+ +V Sbjct: 176 AALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYCTNIDKKVSQVEV 235 Query: 421 KTFFESRCGQVSRLRLLGDQVHSTRIAFVEFVVAESAILSLTCCGQLLGSHPVRVSPSKT 242 K FFES CG+V+RLRLLGDQVHSTRIAFVEF +AESAI++L C G LGS PVRVSPSKT Sbjct: 236 KNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIVALNCSGMALGSQPVRVSPSKT 295 Query: 241 PVRVR 227 PVR R Sbjct: 296 PVRPR 300 >ref|XP_002316790.1| predicted protein [Populus trichocarpa] gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa] Length = 308 Score = 292 bits (747), Expect = 1e-76 Identities = 167/305 (54%), Positives = 199/305 (65%), Gaps = 11/305 (3%) Frame = -3 Query: 1108 VAITGEVTVETAAGNVASSSPTTQSGQDCVNVVSVTXXXXXXXXXXXXXXXEITDWLSKL 929 +A E+ E A ++S+ TT + N+ S ++ D +KL Sbjct: 1 MAAVVEIASEVAVAAKSNSNTTTNKNDNNNNLDS----ERNPKSESEFTVQKLVDMFTKL 56 Query: 928 NPLAKEFVPSA-NATDQNQ----------DQSAVXXXXXXXXXXXXXXXXRMTARAVRAQ 782 NPLAKEF PS+ N + Q QSA R+ RA RAQ Sbjct: 57 NPLAKEFFPSSYNKNNPKQFHINNFPVPNKQSANDNFPKRRRNDFNQGRRRLNGRAYRAQ 116 Query: 781 REDCIRRTVYVSDIDHLVSEELLAYVFSCCGLVSDCRICGDPRSPLRFAFVEFKEEYAAR 602 RED IRRTVYVSDID V+EE LA +FS CG V DCRICGDPRS LRFAFVEF E AR Sbjct: 117 REDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVDCRICGDPRSVLRFAFVEFAVEQGAR 176 Query: 601 AALNLTGALLGVFPIKVLPSKTAILPVNPRYLPRSEDDIEKASRTVYCTNIDKKVTTEDV 422 AALNL G +LG +P++VLPSKTAILPVNP +LP+SED+ E +RTVYCTNI+KKV+ +V Sbjct: 177 AALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQSEDEREMCTRTVYCTNIEKKVSQAEV 236 Query: 421 KTFFESRCGQVSRLRLLGDQVHSTRIAFVEFVVAESAILSLTCCGQLLGSHPVRVSPSKT 242 K FFES CG+V+RLRLLGD VHSTRIAFVEF +AESAI++L C G +LGS PVRVSPSKT Sbjct: 237 KNFFESICGEVTRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGMVLGSQPVRVSPSKT 296 Query: 241 PVRVR 227 PVR R Sbjct: 297 PVRPR 301 >ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera] Length = 292 Score = 292 bits (747), Expect = 1e-76 Identities = 157/251 (62%), Positives = 185/251 (73%), Gaps = 9/251 (3%) Frame = -3 Query: 952 ITDWLS--KLNPLAKEFVPSANA------TDQNQDQ-SAVXXXXXXXXXXXXXXXXRMTA 800 I D LS KLNPLAKEF PS+ + TD ++D + R++ Sbjct: 35 IVDMLSNLKLNPLAKEFFPSSYSHDHLIPTDFSKDSPNDAYPNNRRRRNNYNQGRRRLSG 94 Query: 799 RAVRAQREDCIRRTVYVSDIDHLVSEELLAYVFSCCGLVSDCRICGDPRSPLRFAFVEFK 620 RA RAQRED IRRTVYVSDID V+EE LA +FS CG V DCR+CGDP S LRFAFVEF Sbjct: 95 RAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRFAFVEFA 154 Query: 619 EEYAARAALNLTGALLGVFPIKVLPSKTAILPVNPRYLPRSEDDIEKASRTVYCTNIDKK 440 +E+ ARAALNL G +LG +P++VLPSKTAILPVNP +LPRSED+ E +RTVYCTNIDKK Sbjct: 155 DEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKK 214 Query: 439 VTTEDVKTFFESRCGQVSRLRLLGDQVHSTRIAFVEFVVAESAILSLTCCGQLLGSHPVR 260 V+ +VK FFE CG+VSRLRLLGD VHSTRIAFVEF +AESAI++L C G +LG+ P+R Sbjct: 215 VSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGLVLGTQPIR 274 Query: 259 VSPSKTPVRVR 227 VSPSKTPVR R Sbjct: 275 VSPSKTPVRPR 285 Score = 66.6 bits (161), Expect = 1e-08 Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 1/92 (1%) Frame = -3 Query: 784 QREDCIRRTVYVSDIDHLVSE-ELLAYVFSCCGLVSDCRICGDPRSPLRFAFVEFKEEYA 608 +RE C R TVY ++ID VS+ E+ + CG VS R+ GD R AFVEF + Sbjct: 198 EREMCAR-TVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAES 256 Query: 607 ARAALNLTGALLGVFPIKVLPSKTAILPVNPR 512 A ALN +G +LG PI+V PSKT + P PR Sbjct: 257 AIVALNCSGLVLGTQPIRVSPSKTPVRPRVPR 288 >gb|AFK42884.1| unknown [Lotus japonicus] Length = 313 Score = 287 bits (735), Expect = 3e-75 Identities = 151/268 (56%), Positives = 183/268 (68%), Gaps = 26/268 (9%) Frame = -3 Query: 952 ITDWLSKLNPLAKEFVPSANATDQNQDQ--------------------------SAVXXX 851 + D +KLNPLA+EF+PS+ A ++D Sbjct: 38 LVDIFTKLNPLAEEFIPSSYAAAAHRDHLHQGFNQWSPNPFLVNNNNNKPLADDQYPNAN 97 Query: 850 XXXXXXXXXXXXXRMTARAVRAQREDCIRRTVYVSDIDHLVSEELLAYVFSCCGLVSDCR 671 R T R ++AQRED +RRTVYVSDID V+EE LA +F+ CG V DCR Sbjct: 98 NRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALFTTCGSVIDCR 157 Query: 670 ICGDPRSPLRFAFVEFKEEYAARAALNLTGALLGVFPIKVLPSKTAILPVNPRYLPRSED 491 ICGDP S LRFAFVEF +EY ARAALNL+G +LG +P++VLPSKTAILPVNP +LPRS+D Sbjct: 158 ICGDPHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPVNPTFLPRSDD 217 Query: 490 DIEKASRTVYCTNIDKKVTTEDVKTFFESRCGQVSRLRLLGDQVHSTRIAFVEFVVAESA 311 + E SRTVYCTNIDKKV+ +VK FFE CG+V+R+RLLGD VHSTRIAFVEF +AESA Sbjct: 218 EREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAESA 277 Query: 310 ILSLTCCGQLLGSHPVRVSPSKTPVRVR 227 I++L+C G LLG+ PVRVSPSKTPVR R Sbjct: 278 IIALSCSGMLLGTQPVRVSPSKTPVRPR 305 Score = 62.8 bits (151), Expect = 2e-07 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Frame = -3 Query: 784 QREDCIRRTVYVSDIDHLVSEELLAYVFSC-CGLVSDCRICGDPRSPLRFAFVEFKEEYA 608 +RE C RTVY ++ID VS+ + F CG V+ R+ GD R AFVEF + Sbjct: 218 EREMC-SRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAES 276 Query: 607 ARAALNLTGALLGVFPIKVLPSKTAILPVNPR 512 A AL+ +G LLG P++V PSKT + P PR Sbjct: 277 AIIALSCSGMLLGTQPVRVSPSKTPVRPRVPR 308 >gb|ABK22180.1| unknown [Picea sitchensis] Length = 288 Score = 287 bits (735), Expect = 3e-75 Identities = 147/244 (60%), Positives = 179/244 (73%), Gaps = 2/244 (0%) Frame = -3 Query: 952 ITDWLSKLNPLAKEFVPSANATDQN--QDQSAVXXXXXXXXXXXXXXXXRMTARAVRAQR 779 + D LSKLNPLA+EF+P + + + R+ R +RAQ+ Sbjct: 38 LVDLLSKLNPLAEEFIPQPHRSPSFIINGNGSFANNSRRKKNNFNQGKRRLNGRNIRAQQ 97 Query: 778 EDCIRRTVYVSDIDHLVSEELLAYVFSCCGLVSDCRICGDPRSPLRFAFVEFKEEYAARA 599 ED +RRTVYV DIDH V+EE LA +F CG V DCRICGDP S LRFAF+EF +E ARA Sbjct: 98 EDSVRRTVYVCDIDHQVTEEQLAALFINCGQVIDCRICGDPNSVLRFAFIEFADEQGARA 157 Query: 598 ALNLTGALLGVFPIKVLPSKTAILPVNPRYLPRSEDDIEKASRTVYCTNIDKKVTTEDVK 419 AL+L G +LG +P++VLPSKTAILPVNP +LPRSED+ E +RT+YCTNIDKKV+ +V+ Sbjct: 158 ALSLAGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVR 217 Query: 418 TFFESRCGQVSRLRLLGDQVHSTRIAFVEFVVAESAILSLTCCGQLLGSHPVRVSPSKTP 239 FFES CG+VSRLRLLGD VHSTRIAFVEFV+AESAIL+L C G ++GS P+RVSPSKTP Sbjct: 218 MFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALNCSGAIVGSLPIRVSPSKTP 277 Query: 238 VRVR 227 VR R Sbjct: 278 VRPR 281