BLASTX nr result

ID: Bupleurum21_contig00015076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015076
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   229   2e-58
emb|CBI32615.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   225   3e-57
ref|XP_002326167.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   223   1e-56

>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/138 (78%), Positives = 125/138 (90%)
 Frame = +3

Query: 3    KHLQILTEEEVERLLCGEREVWNIHELLDHIKFDHGYTASSPPVVDLLDIIREFDRERQK 182
            KHLQI TEEE+E+LLCGER+ W  + LLDHIKFDHGYTASSPP+++LL+I++EFD E+++
Sbjct: 1438 KHLQIFTEEELEKLLCGERDSWACNGLLDHIKFDHGYTASSPPIINLLEIVQEFDHEQRR 1497

Query: 183  AFLRFVTGAPRLPHGGLASLNPKLTIVRKHCSGIEDNDLPSAMTCANFLKLPPYSSKEKM 362
            AFL+FVTGAPRLP GGLASLNPKLTIVRKHCS   D DLPS MTCAN+LKLPPYSSKE+M
Sbjct: 1498 AFLQFVTGAPRLPPGGLASLNPKLTIVRKHCSKWADADLPSVMTCANYLKLPPYSSKERM 1557

Query: 363  REKLLYAITEGQGSFDLS 416
            +EKLLYAITEGQGSF LS
Sbjct: 1558 KEKLLYAITEGQGSFHLS 1575


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/138 (78%), Positives = 125/138 (90%)
 Frame = +3

Query: 3    KHLQILTEEEVERLLCGEREVWNIHELLDHIKFDHGYTASSPPVVDLLDIIREFDRERQK 182
            KHLQI TEEE+E+LLCGER+ W  + LLDHIKFDHGYTASSPP+++LL+I++EFD E+++
Sbjct: 1350 KHLQIFTEEELEKLLCGERDSWACNGLLDHIKFDHGYTASSPPIINLLEIVQEFDHEQRR 1409

Query: 183  AFLRFVTGAPRLPHGGLASLNPKLTIVRKHCSGIEDNDLPSAMTCANFLKLPPYSSKEKM 362
            AFL+FVTGAPRLP GGLASLNPKLTIVRKHCS   D DLPS MTCAN+LKLPPYSSKE+M
Sbjct: 1410 AFLQFVTGAPRLPPGGLASLNPKLTIVRKHCSKWADADLPSVMTCANYLKLPPYSSKERM 1469

Query: 363  REKLLYAITEGQGSFDLS 416
            +EKLLYAITEGQGSF LS
Sbjct: 1470 KEKLLYAITEGQGSFHLS 1487


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  225 bits (574), Expect = 3e-57
 Identities = 105/137 (76%), Positives = 123/137 (89%)
 Frame = +3

Query: 6    HLQILTEEEVERLLCGEREVWNIHELLDHIKFDHGYTASSPPVVDLLDIIREFDRERQKA 185
            HL+I  EEE+ER+LCGE + W ++EL DHIKFDHGYTASSPP+++LL+I+REFD E+++A
Sbjct: 1422 HLRIFNEEELERMLCGECDSWAVNELGDHIKFDHGYTASSPPIINLLEIVREFDNEQRRA 1481

Query: 186  FLRFVTGAPRLPHGGLASLNPKLTIVRKHCSGIEDNDLPSAMTCANFLKLPPYSSKEKMR 365
            FL+FVTGAPRLP GGLASLNPKLTIVRKHCS   D DLPS MTCAN+LKLPPYSSKE+M+
Sbjct: 1482 FLQFVTGAPRLPPGGLASLNPKLTIVRKHCSNRADTDLPSVMTCANYLKLPPYSSKERMK 1541

Query: 366  EKLLYAITEGQGSFDLS 416
            EKLLYAITEGQGSF LS
Sbjct: 1542 EKLLYAITEGQGSFHLS 1558


>ref|XP_002326167.1| predicted protein [Populus trichocarpa] gi|222833360|gb|EEE71837.1|
           predicted protein [Populus trichocarpa]
          Length = 659

 Score =  225 bits (574), Expect = 3e-57
 Identities = 112/151 (74%), Positives = 126/151 (83%), Gaps = 13/151 (8%)
 Frame = +3

Query: 3   KHLQILTEEEVERLLCGEREVWNIHELLDHIKFDHGYTASSPPVVDLLDIIREFDRERQK 182
           KHL I TEEE+ERLLCGERE W  +ELLDHIKFDHGYTASSPPVV+LL+II+EF+ E+++
Sbjct: 509 KHLMIFTEEELERLLCGEREFWAFNELLDHIKFDHGYTASSPPVVNLLEIIKEFEYEQRR 568

Query: 183 AFLRFVTGAPRLPHGGLASLNPKLTIVRK-------------HCSGIEDNDLPSAMTCAN 323
           +FL+FVTGAPRLP GGLASLNPKLTIVRK             HCS  ED DLPS MTCAN
Sbjct: 569 SFLQFVTGAPRLPTGGLASLNPKLTIVRKSLFNHLSSWCSLQHCSNCEDVDLPSVMTCAN 628

Query: 324 FLKLPPYSSKEKMREKLLYAITEGQGSFDLS 416
           +LKLPPYSSK+KM+EKLLYAITEGQGSF LS
Sbjct: 629 YLKLPPYSSKDKMKEKLLYAITEGQGSFHLS 659


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
            gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
            putative [Ricinus communis]
          Length = 1561

 Score =  223 bits (568), Expect = 1e-56
 Identities = 106/138 (76%), Positives = 121/138 (87%)
 Frame = +3

Query: 3    KHLQILTEEEVERLLCGEREVWNIHELLDHIKFDHGYTASSPPVVDLLDIIREFDRERQK 182
            KHLQ+ T EE+ERLLCGE + W  +EL DHIKFDHGYTASSPP+ +LL+I++ F++E Q+
Sbjct: 1424 KHLQVFTVEELERLLCGEHDFWVYNELFDHIKFDHGYTASSPPITNLLEIMQGFNQEEQR 1483

Query: 183  AFLRFVTGAPRLPHGGLASLNPKLTIVRKHCSGIEDNDLPSAMTCANFLKLPPYSSKEKM 362
            AFL+FVTGAPRLP GGLASLNPKLTIVRKHCS   D DLPS MTCAN+LKLPPYSSKEKM
Sbjct: 1484 AFLQFVTGAPRLPPGGLASLNPKLTIVRKHCSNRVDADLPSVMTCANYLKLPPYSSKEKM 1543

Query: 363  REKLLYAITEGQGSFDLS 416
            +EKLLYAITEGQGSF LS
Sbjct: 1544 KEKLLYAITEGQGSFHLS 1561


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