BLASTX nr result
ID: Bupleurum21_contig00015069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00015069
(620 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16259.3| unnamed protein product [Vitis vinifera] 132 5e-29
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni... 132 5e-29
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p... 124 2e-26
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2... 123 3e-26
ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subuni... 121 9e-26
>emb|CBI16259.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 132 bits (332), Expect = 5e-29
Identities = 56/78 (71%), Positives = 70/78 (89%)
Frame = +1
Query: 4 EQTKLLNHACFGRPIITADKDKQWFQLSLEEAFYMCYSLNCLKVVGENNHVKDNNQLWDY 183
EQT+LLN +CFGRP+ITA+KDKQWFQLS+EEAFY+C+SL CLK+VGE+NH+K++ +LW Y
Sbjct: 51 EQTELLNRSCFGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQY 110
Query: 184 MVSLRESFPAFYKAYSHL 237
M S RE+FP FY AYSHL
Sbjct: 111 MKSRRETFPDFYMAYSHL 128
Score = 100 bits (248), Expect = 3e-19
Identities = 46/83 (55%), Positives = 59/83 (71%)
Frame = +3
Query: 372 YRHHPSLVHSEYAVLVSAEEGNASGRLKVWSDIHCTLRLCGGVAKTLLVLHVSINSKLAT 551
Y + L + V ++ GNA+GRL+VWSD CT+RLCG VAKTLLV+H++ N AT
Sbjct: 122 YMAYSHLRIKNWVVRSGSQYGNANGRLRVWSDFDCTIRLCGSVAKTLLVIHINKNGHGAT 181
Query: 552 SPACLESYVVEERTITRWNPEQC 620
+P CL+ Y VEERTITRW+ EQC
Sbjct: 182 TPLCLKKYSVEERTITRWSAEQC 204
>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
vinifera]
Length = 242
Score = 132 bits (332), Expect = 5e-29
Identities = 56/78 (71%), Positives = 70/78 (89%)
Frame = +1
Query: 4 EQTKLLNHACFGRPIITADKDKQWFQLSLEEAFYMCYSLNCLKVVGENNHVKDNNQLWDY 183
EQT+LLN +CFGRP+ITA+KDKQWFQLS+EEAFY+C+SL CLK+VGE+NH+K++ +LW Y
Sbjct: 51 EQTELLNRSCFGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQY 110
Query: 184 MVSLRESFPAFYKAYSHL 237
M S RE+FP FY AYSHL
Sbjct: 111 MKSRRETFPDFYMAYSHL 128
Score = 127 bits (318), Expect = 2e-27
Identities = 59/84 (70%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Frame = +3
Query: 372 YRHHPSLVHSEYAVLVSAEEG-NASGRLKVWSDIHCTLRLCGGVAKTLLVLHVSINSKLA 548
YRHHP+LVHSEYAVLV +EE NA+GRL+VWSD CT+RLCG VAKTLLV+H++ N A
Sbjct: 148 YRHHPALVHSEYAVLVLSEENENANGRLRVWSDFDCTIRLCGSVAKTLLVIHINKNGHGA 207
Query: 549 TSPACLESYVVEERTITRWNPEQC 620
T+P CL+ Y VEERTITRW+ EQC
Sbjct: 208 TTPLCLKKYSVEERTITRWSAEQC 231
>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
endonuclease subunit Sen2-2, putative [Ricinus communis]
Length = 237
Score = 124 bits (310), Expect = 2e-26
Identities = 59/83 (71%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
Frame = +3
Query: 372 YRHHPSLVHSEYAVLV-SAEEGNASGRLKVWSDIHCTLRLCGGVAKTLLVLHVSINSKLA 548
YRHHPSLVHSEYAVLV S E+ NA+GRL+VWSD HCTLRLCG VAKTLLVL ++ N
Sbjct: 148 YRHHPSLVHSEYAVLVLSEEDANANGRLRVWSDFHCTLRLCGSVAKTLLVLGINKNCHGT 207
Query: 549 TSPACLESYVVEERTITRWNPEQ 617
T P+CLE Y VEERT RW+P+Q
Sbjct: 208 TLPSCLEKYSVEERTFARWSPQQ 230
Score = 110 bits (276), Expect = 2e-22
Identities = 48/79 (60%), Positives = 63/79 (79%)
Frame = +1
Query: 1 TEQTKLLNHACFGRPIITADKDKQWFQLSLEEAFYMCYSLNCLKVVGENNHVKDNNQLWD 180
+EQT+LL ACFGRP+IT++KDKQWFQL +EEAFY+ YSL C+K+V E+N + +LW
Sbjct: 50 SEQTELLTRACFGRPMITSEKDKQWFQLGIEEAFYLSYSLKCIKIVSEDNCCISDLELWQ 109
Query: 181 YMVSLRESFPAFYKAYSHL 237
+M S + +FP FYKAYSHL
Sbjct: 110 FMKSQKPTFPDFYKAYSHL 128
>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
predicted protein [Populus trichocarpa]
Length = 235
Score = 123 bits (308), Expect = 3e-26
Identities = 55/79 (69%), Positives = 65/79 (82%)
Frame = +1
Query: 1 TEQTKLLNHACFGRPIITADKDKQWFQLSLEEAFYMCYSLNCLKVVGENNHVKDNNQLWD 180
TEQT+LL ACFG+PIITA+K+KQWFQL LEEAFY+CYSL CLK+ GE+N VK++ LW
Sbjct: 50 TEQTELLTRACFGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWL 109
Query: 181 YMVSLRESFPAFYKAYSHL 237
YM +E FP FYKAYSHL
Sbjct: 110 YMKLKKEKFPDFYKAYSHL 128
Score = 117 bits (293), Expect = 2e-24
Identities = 56/82 (68%), Positives = 66/82 (80%)
Frame = +3
Query: 372 YRHHPSLVHSEYAVLVSAEEGNASGRLKVWSDIHCTLRLCGGVAKTLLVLHVSINSKLAT 551
Y+HHPSLVHSEYAV+V +E +GRL+VWSD HCT+RLCG VAKTLL+L+V N A
Sbjct: 148 YQHHPSLVHSEYAVIVLSE--GDTGRLRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAI 205
Query: 552 SPACLESYVVEERTITRWNPEQ 617
SP+CLE Y VEE TITRW+PEQ
Sbjct: 206 SPSCLERYSVEECTITRWSPEQ 227
>ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
sativus]
Length = 281
Score = 121 bits (304), Expect = 9e-26
Identities = 57/85 (67%), Positives = 68/85 (80%), Gaps = 2/85 (2%)
Frame = +3
Query: 372 YRHHPSLVHSEYAVLVSAE--EGNASGRLKVWSDIHCTLRLCGGVAKTLLVLHVSINSKL 545
YRHHPSLVHSE+AVLV E + N +GRL+VWSD CT+RLCG VAKTLLVL V+ N
Sbjct: 190 YRHHPSLVHSEFAVLVLCEATDSNGNGRLRVWSDFLCTVRLCGSVAKTLLVLTVNDNGSG 249
Query: 546 ATSPACLESYVVEERTITRWNPEQC 620
SP+CL+SY +EERT+TRW+PEQC
Sbjct: 250 FVSPSCLDSYSIEERTVTRWSPEQC 274
Score = 103 bits (258), Expect = 2e-20
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +1
Query: 4 EQTKLLNHACFGRPIITADKDKQWFQLSLEEAFYMCYSLNCLKVVGENNHVKDNNQLWDY 183
EQT LLN CFGRPI+TA+KDKQWFQ +EEAFY+ Y LNCLK+V + K+ +LW Y
Sbjct: 93 EQTDLLNRTCFGRPILTAEKDKQWFQFGMEEAFYLSYHLNCLKIVDGQDCEKNFQELWRY 152
Query: 184 MVSLRESFPAFYKAYSHL 237
M + + +FP FY AY HL
Sbjct: 153 MKTQKATFPEFYIAYRHL 170