BLASTX nr result

ID: Bupleurum21_contig00015065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015065
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   103   2e-20
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    85   2e-14
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                76   5e-12
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  103 bits (258), Expect = 2e-20
 Identities = 66/176 (37%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
 Frame = -1

Query: 627  RGLYNLLTGKTYTIDLPEAAGRLIFGLSKGWILTLGRDLQINLLHPLLKHQISLPPMLTL 448
            RG Y+ L+GK Y I LPE  G+  +G   GW++T+G DL + LL+PL + QI LP +   
Sbjct: 983  RGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLRAC 1042

Query: 447  PRQYD-YHEDFQPEEAADMFIRKAAISFKPSVSLYHHHTFSP--TVMASYGKCGFLGFTK 277
            P          Q   + D+FI KA +S  PS         SP   VM  Y   G L FTK
Sbjct: 1043 PNLNTLIDSSTQGSRSKDIFIYKAVLSSAPS---------SPDCAVMIIYSDYGRLAFTK 1093

Query: 276  LGDKVWTDVNVPAQSFHDVIYHNGNFYAVNCHGDVYVCVTDGDEEGGELKGRKIAS 109
             G + WT +   +    D+IY NG+F AVN   +V++C    D  G +LK  + A+
Sbjct: 1094 PGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWIC----DISGSQLKTIRFAA 1145


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
 Frame = -1

Query: 627 RGLYNLLTGKTYTIDLPEAAGRLIFGLSKGWILTLGRDLQINLLHPLLKHQISLPPMLTL 448
           RG YNL  GKTY ++LPE   +   G S GW++ +     I LL+PL K +I LP + T 
Sbjct: 65  RGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPLTKARIELPSLSTF 124

Query: 447 P---------RQYDYHEDFQPE---EAADMFIRKAAISFKPSVSLYHHHTFSPTVMASYG 304
           P            + +E F  +      + +IRKA +S  PS   +       T+ ++  
Sbjct: 125 PYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDPSTGNFAVMAIYKTINSTEN 184

Query: 303 KCGFLGFTKLGDKVWTDVNVPAQSFH--DVIYHNGNFYAVNCHGDVYVCVTD 154
               + F K GD  W  +   +Q  H  DV++H G FYAV+  G V +C+TD
Sbjct: 185 ----IAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSICITD 232


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
 Frame = -1

Query: 627 RGLYNLLTGKTYTIDLPEAAGRLIFGLSKGWILTLGRDLQINLLHPLLKHQISLPPMLTL 448
           RG YN   GKTY ++LPE   +   G S GW++ +     I LL+PL K +I LP + T 
Sbjct: 65  RGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLTKSRIELPSLSTF 124

Query: 447 PR---QYDYHEDFQPEE---------AADMFIRKAAISFKPSVSLYHHHTFSPTVMASYG 304
           P    +  Y       E           + +IRKA +S  PSV  +       T+  S  
Sbjct: 125 PNFPTEVIYQNSRNLNEYFIRNNKLRIRETYIRKAIVSEDPSVGSFMVMAIYKTINGSEN 184

Query: 303 KCGFLGFTKLGDKVWTDVNVPAQSFH--DVIYHNGNFYAVNCHGDVYVCVTD 154
               + F K GD         +Q  H  DV++H G FY VN  G V +C+TD
Sbjct: 185 ----IAFCKSGDAALFTTQETSQEIHYQDVMFHRGKFYMVNDKGRVSICITD 232


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
 Frame = -1

Query: 627 RGLYNLLTGKTYTIDLPEAAGRLIFGLSKGWILTLGRDLQINLLHPLLKHQISLPPMLTL 448
           R  ++L  G      +P+A+ +     S GW++T+G + +I+LLHP    QI LP   T 
Sbjct: 65  RKFFSLYNGMILNKRIPKASRKRCLE-SMGWLITVGEEGEISLLHPFSDVQIELPHQNTT 123

Query: 447 PRQYDYHEDFQPEEAADMFIRKAAISFKPSVSLYHHHTFSPTVMASYGKCGFLGFTKLGD 268
             +Y+ H+      A   FI KA +S  PS      HT    +M   G   FL F + GD
Sbjct: 124 V-EYNKHQ----TGALTCFIGKAVLSASPS------HTSDYLLMVIDGGSRFLSFWRPGD 172

Query: 267 KVWTDV---NVPAQSFHDVIYHNGNFYAVNCHGDVYVC 163
             WT V    +   SF D+IY NG  YAV+  G++ VC
Sbjct: 173 IRWTRVTWEGINYSSFADLIYFNGQIYAVDYSGNLLVC 210


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
 Frame = -1

Query: 633 SSRGLYNLLTGKTYTIDLPEAAGRLIF-GLSKGWILTLGRDLQINLLHPLLKHQISLPPM 457
           S R  +NL T K ++++LPEA+ R    G S GW++ L     I +++PL + +I LP +
Sbjct: 65  SYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAI 124

Query: 456 LTLPR--QYDY---------------HEDFQPEEAADMFIRKAAISFKPSVSLYHHHTFS 328
            + P    +DY                      +  D FI+K  +S  P   L     F 
Sbjct: 125 SSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSP---LEKKGDFF 181

Query: 327 PTVMASYGKCGFLGFTKLGDKVWTDVNVPAQSFHDVIYHNGNFYAVNCHGDVYVCVTDGD 148
              MA     G L + K GD+ W  V        DVIY NG FYAVN  G + VC  +G+
Sbjct: 182 -VAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGN 240


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