BLASTX nr result

ID: Bupleurum21_contig00015058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015058
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...   345   1e-92
emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]   343   3e-92
ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc...   317   3e-84
ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Gly...   292   1e-76

>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  345 bits (885), Expect = 1e-92
 Identities = 182/281 (64%), Positives = 217/281 (77%), Gaps = 7/281 (2%)
 Frame = -3

Query: 894 MVKVSPQNRDSKTSKHKPRLRSSSNKYLKPGALAQIRYSKAKASP--CTENGKKKLRGLD 721
           M KVSP+ RDS+T K K RLRSSS++YLKPGALAQ+RY+KA  +   CT+ GKK++  L 
Sbjct: 1   MGKVSPKERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKASTATKSCTDLGKKRVAVLT 60

Query: 720 DVVKIEESDVQVEG---VDESPLFLSPVRFGFSSAVEPLDVRTNYLQRTPKTPSPVEDCD 550
           +  K E  D+ +E    +D+SPL LSPV            ++ +YL RTPKTP   EDC+
Sbjct: 61  NK-KAEGDDIMIENNSVIDKSPLMLSPVDL----------LKHSYLVRTPKTPR-TEDCE 108

Query: 549 FDSRLEALPMDLLVKIMCHLHHDQLRAVFHVSQRIRKAVVIARQFYFNYTTPDRSRQEML 370
            DSRLE+LPMDLLVKI+CHLHHDQLRAVFHVS+RIR+AVV+ARQF+FNYTTPDRSRQE+L
Sbjct: 109 SDSRLESLPMDLLVKILCHLHHDQLRAVFHVSRRIRRAVVLARQFHFNYTTPDRSRQEIL 168

Query: 369 RTMTPLPTEHWPF--RGDGKGNLLPSPKTPKAPRQGPRPPSRMKLSEGQHISTVLFQEPA 196
           R MTP PTEHWPF  +GDGKG  +PSP TPKAPR GPRPPSR+K++E + I+ VLFQ+ A
Sbjct: 169 RVMTPRPTEHWPFVSKGDGKGAFMPSPHTPKAPRHGPRPPSRVKVTEMKQIAAVLFQDSA 228

Query: 195 FSARCMGPSALQKTLFKSFASNRVLFYEDELCHAVAQNKLR 73
           F +R M PSAL K L KS ASNR LFYEDELC AVAQNKLR
Sbjct: 229 FPSRYMVPSALSKPLCKSLASNRALFYEDELCQAVAQNKLR 269


>emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]
          Length = 463

 Score =  343 bits (881), Expect = 3e-92
 Identities = 181/277 (65%), Positives = 214/277 (77%), Gaps = 4/277 (1%)
 Frame = -3

Query: 894  MVKVSPQNRDSKTSKHKPRLRSSSNKYLKPGALAQIRYSKAKASPCTENGKKKLRGLDDV 715
            M KVSP+ R  KT K K R R+SSNKYL+PGALAQ+RYSKA    CT+  KK++  LD  
Sbjct: 191  MGKVSPKERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKAATKSCTDLVKKQVAVLDS- 249

Query: 714  VKIEESDVQV--EGVDESPLFLSPVRFGFSSAVEPLDVRTNYLQRTPKTPSPVEDCDFDS 541
             K  +SD+ +  E +DES    SP +FGFS  +  L  + + L  TP+TP  V++C+ +S
Sbjct: 250  -KKADSDIALGGEAIDESLPIASPEKFGFSPVIGQL--KQSSLMGTPRTPR-VDECESES 305

Query: 540  RLEALPMDLLVKIMCHLHHDQLRAVFHVSQRIRKAVVIARQFYFNYTTPDRSRQEMLRTM 361
            +LE+LPMDLLVKI+CHLHHDQLRAVFHVSQRIRKAV++ARQF+FNYTTPDRSRQEMLRTM
Sbjct: 306  KLESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTM 365

Query: 360  TPLPTEHWPF--RGDGKGNLLPSPKTPKAPRQGPRPPSRMKLSEGQHISTVLFQEPAFSA 187
            TPLPTEHWPF  +GDGKG  L SP TPKAPR GPRPPSR+K++E + I+ VLFQE A  +
Sbjct: 366  TPLPTEHWPFVSKGDGKGVFLASPHTPKAPRHGPRPPSRLKVTEMRQIAAVLFQESALPS 425

Query: 186  RCMGPSALQKTLFKSFASNRVLFYEDELCHAVAQNKL 76
            RCM PS L K L KS ASNRVLFYEDELC AVAQNKL
Sbjct: 426  RCMVPSILPKPLCKSLASNRVLFYEDELCQAVAQNKL 462


>ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  332 bits (850), Expect = 1e-88
 Identities = 178/289 (61%), Positives = 218/289 (75%), Gaps = 15/289 (5%)
 Frame = -3

Query: 894 MVKVSPQNRDSKTSKHKPRLRSSSNKYLKPGALAQIRYSKAKASP-CTENGKKKLR--GL 724
           M KVSP++ + KT K K RLRSSS++YLKPGALAQ++YSKA A+  CT+ GKK++   G 
Sbjct: 1   MGKVSPKDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKSCTDLGKKRVAVFGN 60

Query: 723 DDVVKIEESDVQVEGVDESPLFLSPVRFGFSS---------AVEPLDV-RTNYLQRTPKT 574
             V   +E  V+   +D+SPL LSPV                + P+D+ + N+L RTPKT
Sbjct: 61  KKVGDDDELVVEDRAMDKSPLLLSPVGLCKQHHPTIDKSPLMLSPVDLLKQNHLARTPKT 120

Query: 573 PSPVEDCDFDSRLEALPMDLLVKIMCHLHHDQLRAVFHVSQRIRKAVVIARQFYFNYTTP 394
           P  +EDCD +SRLE+LPM+LLVKI+CHLHHDQLRAVFHVSQR+RKAV++ARQF+FNYTTP
Sbjct: 121 PR-IEDCDTESRLESLPMELLVKILCHLHHDQLRAVFHVSQRVRKAVLLARQFHFNYTTP 179

Query: 393 DRSRQEMLRTMTPLPTEHWPF--RGDGKGNLLPSPKTPKAPRQGPRPPSRMKLSEGQHIS 220
           DRSRQEML TMTP PTEHWPF  +G GKG  + +P TPKAPR GPRPPSR+K++E + I+
Sbjct: 180 DRSRQEMLLTMTPRPTEHWPFMSKGSGKGIFMSTPHTPKAPRHGPRPPSRIKITEMKSIA 239

Query: 219 TVLFQEPAFSARCMGPSALQKTLFKSFASNRVLFYEDELCHAVAQNKLR 73
            VLFQ+   S+RCM PS L K L KS ASNRVLFYE+ELC AVAQNKLR
Sbjct: 240 AVLFQDSTLSSRCMVPSTLPKPLCKSVASNRVLFYEEELCQAVAQNKLR 288


>ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus]
           gi|449524671|ref|XP_004169345.1| PREDICTED: F-box
           protein At4g35930-like [Cucumis sativus]
          Length = 266

 Score =  317 bits (812), Expect = 3e-84
 Identities = 171/277 (61%), Positives = 202/277 (72%), Gaps = 3/277 (1%)
 Frame = -3

Query: 894 MVKVSPQNRDSKTSKHKPRLRSSSNKYLKPGALAQIRYSKAK-ASPCTENGKKKLRGLDD 718
           M KV   +R+ K  K + R + S  KYLKPGALA++R SK   A  CT+ G+K++  LD 
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 717 VVKIEESDVQVEGVDESPLFLSPVRFGFSSAVEPLDVRTNYLQRTPKTPSPVEDCDFDSR 538
                   ++ +  D SPL LSPV+         L +  N++  TPKTP  VEDC+ +SR
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVK---------LVMHINHIG-TPKTPR-VEDCESESR 109

Query: 537 LEALPMDLLVKIMCHLHHDQLRAVFHVSQRIRKAVVIARQFYFNYTTPDRSRQEMLRTMT 358
           LE+LPMDLLVKI+CHLHHDQLRAVFHVSQRIRKAV++ARQF+FNYTTPDRSRQEMLR  T
Sbjct: 110 LESLPMDLLVKILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITT 169

Query: 357 PLPTEHWPF--RGDGKGNLLPSPKTPKAPRQGPRPPSRMKLSEGQHISTVLFQEPAFSAR 184
           P PTEHWPF  +GDGKG  LPSP TPKAPR GPRPPSR+K+SE + ++ VLFQE AF  R
Sbjct: 170 PRPTEHWPFVNKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPR 229

Query: 183 CMGPSALQKTLFKSFASNRVLFYEDELCHAVAQNKLR 73
           CM PS + K L KS ASNRVLFYEDELC AVAQNKLR
Sbjct: 230 CMVPSVISKPLCKSLASNRVLFYEDELCQAVAQNKLR 266


>ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Glycine max]
          Length = 284

 Score =  292 bits (747), Expect = 1e-76
 Identities = 165/297 (55%), Positives = 203/297 (68%), Gaps = 23/297 (7%)
 Frame = -3

Query: 894 MVKVSPQNRDSKTSKHKPRLRSSSNKYLKPGALAQIRYSKAKASP------CTENGKKKL 733
           M KVS + +  +  K + ++RSS NKYL+PGALAQ+R SK   S       CT+ GKK++
Sbjct: 1   MGKVSLKEKGWRV-KGRRQVRSSGNKYLRPGALAQLRCSKPSGSGGGGKCCCTDLGKKRV 59

Query: 732 RGLDD---------------VVKIEESDVQVEGVDESPLFLSPVRFGFSSAVEPLDVRTN 598
             L                   +  E++++V   D+SP+ LSPV          L    +
Sbjct: 60  AVLHSRKSGGGCGGGGGGSVQQRYVENNIRV--FDKSPVMLSPVN---------LVKHNS 108

Query: 597 YLQRTPKTPSPVEDCDFDSRLEALPMDLLVKIMCHLHHDQLRAVFHVSQRIRKAVVIARQ 418
               TPKTP  ++D   +S+LE+LPMDLLVKI+CHLHHDQLRAVFHVSQ+IRKAV+IARQ
Sbjct: 109 GFVGTPKTPR-LDDSLSESKLESLPMDLLVKILCHLHHDQLRAVFHVSQKIRKAVIIARQ 167

Query: 417 FYFNYTTPDRSRQEMLRTMTPLPTEHWPF--RGDGKGNLLPSPKTPKAPRQGPRPPSRMK 244
           F+FNYTTPDRSRQEML TMTP PTEHWPF  +GDGKG  +PSP TPKAPR GPRPPSR+K
Sbjct: 168 FHFNYTTPDRSRQEMLSTMTPRPTEHWPFLCKGDGKGVRIPSPHTPKAPRHGPRPPSRLK 227

Query: 243 LSEGQHISTVLFQEPAFSARCMGPSALQKTLFKSFASNRVLFYEDELCHAVAQNKLR 73
           +SE + ++ VLF E AF + C+ PS + K L KS ASNRVLFYEDELC AVAQNKLR
Sbjct: 228 ISEMRQVTAVLFPESAFPSHCLVPSVISKPLCKSLASNRVLFYEDELCQAVAQNKLR 284


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