BLASTX nr result

ID: Bupleurum21_contig00015034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015034
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261...    70   2e-10
ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818...    67   2e-09
ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
gb|ABK92928.1| unknown [Populus trichocarpa]                           67   2e-09
ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776...    65   6e-09

>ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261891 [Vitis vinifera]
           gi|296083344|emb|CBI22980.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 52/124 (41%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
 Frame = +3

Query: 18  MVGLSVVLEAQXXXXXXXXXXXXPQVINKLTMXXXXXXXXXXXXXXXX------AAFRXX 179
           MVGLS+VLEAQ            PQVINK+TM                      AA    
Sbjct: 1   MVGLSIVLEAQKGINKKT-----PQVINKITMMTKPTPFPSPPARWNSHSPLLPAATTFL 55

Query: 180 XXXXXX-----PDKDIYMYKGDGAFCSVECRCRQIFMDEEKQ------TAAIMYSSNKNS 326
                      P KDIYMYKGD AFCSVECRCRQIFMDEE+       + A M  ++ +S
Sbjct: 56  DECFLCKQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETVRRDNCSLAAMKPTSASS 115

Query: 327 TPPS 338
            P S
Sbjct: 116 CPSS 119


>ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818870 [Glycine max]
          Length = 133

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 49/119 (41%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
 Frame = +3

Query: 18  MVGLSVVLEAQXXXXXXXXXXXXPQVINKLTMXXXXXXXXXXXXXXXXAAFRXXXXXXXX 197
           MVGLSVVLEAQ            PQVINK TM                + F+        
Sbjct: 1   MVGLSVVLEAQKSCINKKT----PQVINKTTMLMLSSIHNKPSPQPS-SLFQPPTFLDQC 55

Query: 198 --------PDKDIYMYKGDGAFCSVECRCRQIFMDEEK-------QTAAIMYSSNKNST 329
                   P KDIYMYKGD AFCSV+CRC+QIF DEE+         AA+  +S+ +ST
Sbjct: 56  FLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFSDEEEAIQKEKCSLAAMRPTSSSSST 114


>ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|222838582|gb|EEE76947.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/110 (40%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
 Frame = +3

Query: 18  MVGLSVVLEAQXXXXXXXXXXXXPQVINKLTMXXXXXXXXXXXXXXXXAAFRXXXXXXXX 197
           MVGLS+VLEAQ            PQVINK TM                ++          
Sbjct: 1   MVGLSIVLEAQKSGSVNSKT---PQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRN 57

Query: 198 --------------------PDKDIYMYKGDGAFCSVECRCRQIFMDEEK 287
                               P KDIYMYKGD AFCSVECRCRQIFMDEE+
Sbjct: 58  CSFPVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEE 107


>gb|ABK92928.1| unknown [Populus trichocarpa]
          Length = 157

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/110 (40%), Positives = 49/110 (44%), Gaps = 20/110 (18%)
 Frame = +3

Query: 18  MVGLSVVLEAQXXXXXXXXXXXXPQVINKLTMXXXXXXXXXXXXXXXXAAFRXXXXXXXX 197
           MVGLS+VLEAQ            PQVINK TM                ++          
Sbjct: 1   MVGLSIVLEAQKSGSVNSKT---PQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRN 57

Query: 198 --------------------PDKDIYMYKGDGAFCSVECRCRQIFMDEEK 287
                               P KDIYMYKGD AFCSVECRCRQIFMDEE+
Sbjct: 58  CSFPVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEE 107


>ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776779 [Glycine max]
          Length = 135

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/99 (42%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
 Frame = +3

Query: 18  MVGLSVVLEAQXXXXXXXXXXXXPQVINKLTMXXXXXXXXXXXXXXXXAAFRXXXXXXXX 197
           MVGLSVVLEAQ            PQVINK +M                ++          
Sbjct: 1   MVGLSVVLEAQKSCINKKT----PQVINKTSMMLSSIHNKPSPPLPQPSSLFQPPTFLDQ 56

Query: 198 ---------PDKDIYMYKGDGAFCSVECRCRQIFMDEEK 287
                    P KDIYMYKGD AFCSV+CRC+QIF DEE+
Sbjct: 57  CFLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFTDEEE 95


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