BLASTX nr result

ID: Bupleurum21_contig00015025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015025
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003570098.1| PREDICTED: zinc finger CCCH domain-containin...   152   5e-35
ref|XP_002867609.1| hypothetical protein ARALYDRAFT_329122 [Arab...   152   8e-35
dbj|BAJ90661.1| predicted protein [Hordeum vulgare subsp. vulgare]    151   1e-34
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin...   150   2e-34
ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34

>ref|XP_003570098.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
           [Brachypodium distachyon]
          Length = 432

 Score =  152 bits (385), Expect = 5e-35
 Identities = 76/210 (36%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
 Frame = +1

Query: 70  VITGLEVI--ADRLYTASKDGLFKIWCCNTREILHTMNIGSEIGAMISSGSWIIFGLCDS 243
           V+TG+ +   +D+LY+ SKDG  ++W C T +    +NIG+EIG MI  G W+  GL D+
Sbjct: 150 VVTGIALPTGSDKLYSGSKDGTVRLWDCQTGQCASVINIGAEIGCMIIEGPWLFVGLPDA 209

Query: 244 IKCLHCENNIEVNLNANGGKILSLLAGIEYLYAGAKDGTLLSFKFSNDT--FVPAITTKA 417
           +K  + +   E+NL    G++ +L  G E L+A  +DG +L+++FS  T  F PA +   
Sbjct: 210 VKVWNMQTQAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNCFEPAASLVG 269

Query: 418 HSLGVVALAGQGSWLISSSLDSYVKVSDAFSLECVQTIQPHRSFVTAVLSWENYVVTSAL 597
           H L VV+L      L S S+D  ++V D  +L+C+QT+  H S V +VL W+ ++++ +L
Sbjct: 270 HQLAVVSLVVGAMRLYSGSMDKTIRVWDLATLQCIQTLSDHTSVVMSVLCWDQFLLSCSL 329

Query: 598 DKSFKIWLMLPNGNLQHAKSVSMDKGVLSL 687
           D++ K+W    +GNL+   +   + G L+L
Sbjct: 330 DQTIKVWAATESGNLEVTYTHKEENGALAL 359


>ref|XP_002867609.1| hypothetical protein ARALYDRAFT_329122 [Arabidopsis lyrata subsp.
           lyrata] gi|297313445|gb|EFH43868.1| hypothetical protein
           ARALYDRAFT_329122 [Arabidopsis lyrata subsp. lyrata]
          Length = 667

 Score =  152 bits (383), Expect = 8e-35
 Identities = 74/210 (35%), Positives = 133/210 (63%), Gaps = 4/210 (1%)
 Frame = +1

Query: 70  VITGLEVIA--DRLYTASKDGLFKIWCCNTREILHTMNIGSEIGAMISSGSWIIFGLCDS 243
           VITG+ + +  D+LYTASKD   +IW C + +    +N+G E+G MIS G W++ G+ + 
Sbjct: 144 VITGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCMISEGPWLLVGMPNL 203

Query: 244 IKCLHCENNIEVNLNANGGKILSLLAGIEYLYAGAKDGTLLSFKFSNDT--FVPAITTKA 417
           +K  + +NN++++L    G++ SL+ G + L+AG +DG++L +K+++ T  F PA +   
Sbjct: 204 VKAWNIQNNVDLSLTGPVGQVYSLVVGTDLLFAGTQDGSILVWKYNSTTSCFDPAASLMG 263

Query: 418 HSLGVVALAGQGSWLISSSLDSYVKVSDAFSLECVQTIQPHRSFVTAVLSWENYVVTSAL 597
           H+L VV+L    + L S ++D+ +KV    +L+C+QT+  H S V +++ W+ ++++ +L
Sbjct: 264 HTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSL 323

Query: 598 DKSFKIWLMLPNGNLQHAKSVSMDKGVLSL 687
           D + KIW     GNL+   +   + GVL+L
Sbjct: 324 DNTVKIWAATEGGNLEVTYTHKEEYGVLAL 353


>dbj|BAJ90661.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 433

 Score =  151 bits (381), Expect = 1e-34
 Identities = 72/210 (34%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
 Frame = +1

Query: 70  VITGLEVIA--DRLYTASKDGLFKIWCCNTREILHTMNIGSEIGAMISSGSWIIFGLCDS 243
           V+TG+ + A  D+LY+ SKDG  ++W C T +    + +G E+G MIS G W+  G+ D+
Sbjct: 151 VVTGIALPAGSDKLYSGSKDGTVRLWDCQTGQCAGVLPVGGEVGCMISEGPWVFVGIPDA 210

Query: 244 IKCLHCENNIEVNLNANGGKILSLLAGIEYLYAGAKDGTLLSFKFS--NDTFVPAITTKA 417
           +K  + +   E+NL    G++ +L  G E L+A  +DG +L+++FS   + F PA +   
Sbjct: 211 VKVWNMQTQAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAVTNCFEPAASLTG 270

Query: 418 HSLGVVALAGQGSWLISSSLDSYVKVSDAFSLECVQTIQPHRSFVTAVLSWENYVVTSAL 597
           H L VV+L   G  L S S+D  ++V D  +L+C+QT+  H + V ++L W+ ++++ +L
Sbjct: 271 HQLAVVSLIVGGMRLYSGSMDKTIRVWDLATLQCIQTLSDHTNVVMSLLCWDQFLLSCSL 330

Query: 598 DKSFKIWLMLPNGNLQHAKSVSMDKGVLSL 687
           D++ K+W    +GNL+   +   + G L+L
Sbjct: 331 DQTIKVWAATESGNLEVTYTHKEENGALAL 360


>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
           [Glycine max]
          Length = 426

 Score =  150 bits (380), Expect = 2e-34
 Identities = 73/200 (36%), Positives = 127/200 (63%), Gaps = 2/200 (1%)
 Frame = +1

Query: 94  ADRLYTASKDGLFKIWCCNTREILHTMNIGSEIGAMISSGSWIIFGLCDSIKCLHCENNI 273
           +D+LYT S D   +IW C   + +  +N+G E+G MIS G W+  G+ + +K  + +N  
Sbjct: 152 SDKLYTGSTDETARIWDCQCGKCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLS 211

Query: 274 EVNLNANGGKILSLLAGIEYLYAGAKDGTLLSFKFSNDT--FVPAITTKAHSLGVVALAG 447
           E++LN   G++ +L+   + L+AG +DG++L++KF+  T  F PA + K HS GVV+L  
Sbjct: 212 ELSLNGPVGQVYALVVNNDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVV 271

Query: 448 QGSWLISSSLDSYVKVSDAFSLECVQTIQPHRSFVTAVLSWENYVVTSALDKSFKIWLML 627
             + L S S+D+ +KV +  +L+C+QT+  H S V +VL W+ ++++ +LDK+ K+W   
Sbjct: 272 GANRLYSGSMDNTIKVWNLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYAT 331

Query: 628 PNGNLQHAKSVSMDKGVLSL 687
            +GNL+   S + + G+L+L
Sbjct: 332 ESGNLEVTYSHNEENGILTL 351


>ref|XP_002318843.1| predicted protein [Populus trichocarpa] gi|222859516|gb|EEE97063.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  150 bits (380), Expect = 2e-34
 Identities = 74/210 (35%), Positives = 132/210 (62%), Gaps = 4/210 (1%)
 Frame = +1

Query: 70  VITGLEVIA--DRLYTASKDGLFKIWCCNTREILHTMNIGSEIGAMISSGSWIIFGLCDS 243
           VI+G+ + +  D+LYT SKD   ++W C + +    +N+G E+G MIS G WI  GL + 
Sbjct: 169 VISGIALPSGSDKLYTGSKDETVRVWDCQSGQCTGVVNLGGEVGCMISEGPWIFVGLPNV 228

Query: 244 IKCLHCENNIEVNLNANGGKILSLLAGIEYLYAGAKDGTLLSFKFSNDT--FVPAITTKA 417
           +K  + + N +++LN   G++ +L+ G + L+AG +DG++L +KF+  T  F PA++ K 
Sbjct: 229 VKAWNTQTNADLSLNGPIGQVYALVVGNDLLFAGTQDGSILVWKFNAATYNFEPAVSLKD 288

Query: 418 HSLGVVALAGQGSWLISSSLDSYVKVSDAFSLECVQTIQPHRSFVTAVLSWENYVVTSAL 597
           H + VV+L    + L S S+D  +KV    +L+C+QT+  H S V ++L WE ++++ +L
Sbjct: 289 HKMAVVSLVVGANRLYSGSMDHSIKVWSLETLQCIQTLTDHTSVVMSLLCWEQFLLSCSL 348

Query: 598 DKSFKIWLMLPNGNLQHAKSVSMDKGVLSL 687
           D++ K+W    +GNL+   + + + G+L+L
Sbjct: 349 DQTIKVWAATESGNLEVTFTHNEEHGLLTL 378


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