BLASTX nr result

ID: Bupleurum21_contig00015020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015020
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869056.1| hypothetical protein ARALYDRAFT_912780 [Arab...    84   9e-15
emb|CAA21471.1| putative protein [Arabidopsis thaliana] gi|72705...    83   2e-14
gb|AAM65849.1| unknown [Arabidopsis thaliana]                          83   2e-14
ref|NP_567990.1| pentatricopeptide repeat-containing protein [Ar...    83   2e-14
ref|XP_003568951.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14

>ref|XP_002869056.1| hypothetical protein ARALYDRAFT_912780 [Arabidopsis lyrata subsp.
           lyrata] gi|297314892|gb|EFH45315.1| hypothetical protein
           ARALYDRAFT_912780 [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/64 (59%), Positives = 50/64 (78%)
 Frame = -3

Query: 276 GFTVANLVWDMMQARNFIPSFEAVEAYHKGLKEREIPQDDPRLFLVSKMLDDWHKKWGPL 97
           G+TVAN++WD+M ARN +P+  AVEAY+KGLKEREIP+DDPRL LV++  ++   K G L
Sbjct: 381 GYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDDPRLMLVTRTYNNLRLKEGTL 440

Query: 96  PISR 85
           P  R
Sbjct: 441 PNRR 444


>emb|CAA21471.1| putative protein [Arabidopsis thaliana] gi|7270537|emb|CAB81494.1|
           putative protein [Arabidopsis thaliana]
          Length = 477

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/64 (57%), Positives = 50/64 (78%)
 Frame = -3

Query: 276 GFTVANLVWDMMQARNFIPSFEAVEAYHKGLKEREIPQDDPRLFLVSKMLDDWHKKWGPL 97
           G+TVAN++WD+M ARN +P+  AVEAY+KGLKEREIP+DDPRL LV++  ++   + G L
Sbjct: 414 GYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDDPRLMLVTRTYNNLRLREGTL 473

Query: 96  PISR 85
           P  R
Sbjct: 474 PNRR 477


>gb|AAM65849.1| unknown [Arabidopsis thaliana]
          Length = 444

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/64 (57%), Positives = 50/64 (78%)
 Frame = -3

Query: 276 GFTVANLVWDMMQARNFIPSFEAVEAYHKGLKEREIPQDDPRLFLVSKMLDDWHKKWGPL 97
           G+TVAN++WD+M ARN +P+  AVEAY+KGLKEREIP+DDPRL LV++  ++   + G L
Sbjct: 381 GYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDDPRLMLVTRTYNNLRLREGTL 440

Query: 96  PISR 85
           P  R
Sbjct: 441 PNRR 444


>ref|NP_567990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75248494|sp|Q8VYR5.1|PP351_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g35850, mitochondrial; Flags: Precursor
           gi|17979139|gb|AAL49827.1| unknown protein [Arabidopsis
           thaliana] gi|20259115|gb|AAM14273.1| unknown protein
           [Arabidopsis thaliana] gi|332661180|gb|AEE86580.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 444

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/64 (57%), Positives = 50/64 (78%)
 Frame = -3

Query: 276 GFTVANLVWDMMQARNFIPSFEAVEAYHKGLKEREIPQDDPRLFLVSKMLDDWHKKWGPL 97
           G+TVAN++WD+M ARN +P+  AVEAY+KGLKEREIP+DDPRL LV++  ++   + G L
Sbjct: 381 GYTVANMIWDLMLARNILPTLAAVEAYYKGLKEREIPEDDPRLMLVTRTYNNLRLREGTL 440

Query: 96  PISR 85
           P  R
Sbjct: 441 PNRR 444


>ref|XP_003568951.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Brachypodium distachyon]
          Length = 452

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = -3

Query: 276 GFTVANLVWDMMQARNFIPSFEAVEAYHKGLKEREIPQDDPRLFLVSKMLDDWHKKWGPL 97
           G+T AN +WD++QAR  IP+  AVEAYHKGLKEREIP DDPRL  V+  LD+   ++GP 
Sbjct: 389 GYTTANYIWDLLQARKIIPALPAVEAYHKGLKEREIPSDDPRLLNVAHTLDNLQLRFGP- 447

Query: 96  PISRRN 79
              RRN
Sbjct: 448 ---RRN 450


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