BLASTX nr result

ID: Bupleurum21_contig00015019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015019
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568951.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
gb|EEC78508.1| hypothetical protein OsI_18438 [Oryza sativa Indi...   142   4e-32
ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group] g...   142   4e-32
ref|XP_002440585.1| hypothetical protein SORBIDRAFT_09g003510 [S...   137   7e-31
ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31

>ref|XP_003568951.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Brachypodium distachyon]
          Length = 452

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/109 (64%), Positives = 84/109 (77%)
 Frame = -3

Query: 399 VGYTPGGMQLAEEKLKEMASRNFFLSPKMGNDLLIAASGEKTGGFTVANLVWDMMQARNY 220
           +GYTP GMQLA+E L++M  RN FL+PKMG DLL+AASGEKTGG+T AN +WD++QAR  
Sbjct: 346 IGYTPRGMQLAQETLEKMTKRNLFLNPKMGTDLLLAASGEKTGGYTTANYIWDLLQARKI 405

Query: 219 NPSFEAVEAYHKGLKEREIPQDDPRLLLVSKRLDDWHKKLGPSPISRRN 73
            P+  AVEAYHKGLKEREIP DDPRLL V+  LD+   + GP    RRN
Sbjct: 406 IPALPAVEAYHKGLKEREIPSDDPRLLNVAHTLDNLQLRFGP----RRN 450


>gb|EEC78508.1| hypothetical protein OsI_18438 [Oryza sativa Indica Group]
          Length = 454

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/109 (63%), Positives = 86/109 (78%)
 Frame = -3

Query: 399 VGYTPGGMQLAEEKLKEMASRNFFLSPKMGNDLLIAASGEKTGGFTVANLVWDMMQARNY 220
           +G+TP GMQLA+E +++M SRNFFL+ +MG DLL+AASGEKTGG+T+AN VWD+MQ R  
Sbjct: 345 IGHTPRGMQLAQETIEKMTSRNFFLNARMGTDLLLAASGEKTGGYTIANYVWDLMQNRRI 404

Query: 219 NPSFEAVEAYHKGLKEREIPQDDPRLLLVSKRLDDWHKKLGPSPISRRN 73
            PS  AVEAY+KGLKEREIP DDPRL+ VS+ LD+   + GP    RRN
Sbjct: 405 TPSLPAVEAYYKGLKEREIPSDDPRLMNVSRVLDNLSIRFGP----RRN 449


>ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group]
           gi|51038158|gb|AAT93961.1| unknow protein [Oryza sativa
           Japonica Group] gi|51038198|gb|AAT94001.1| unkonw
           protein [Oryza sativa Japonica Group]
           gi|113578184|dbj|BAF16547.1| Os05g0145600 [Oryza sativa
           Japonica Group] gi|215686674|dbj|BAG88927.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222630177|gb|EEE62309.1| hypothetical protein
           OsJ_17098 [Oryza sativa Japonica Group]
          Length = 454

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/109 (63%), Positives = 86/109 (78%)
 Frame = -3

Query: 399 VGYTPGGMQLAEEKLKEMASRNFFLSPKMGNDLLIAASGEKTGGFTVANLVWDMMQARNY 220
           +G+TP GMQLA+E +++M SRNFFL+ +MG DLL+AASGEKTGG+T+AN VWD+MQ R  
Sbjct: 345 IGHTPRGMQLAQETIEKMTSRNFFLNARMGTDLLLAASGEKTGGYTIANYVWDLMQNRRI 404

Query: 219 NPSFEAVEAYHKGLKEREIPQDDPRLLLVSKRLDDWHKKLGPSPISRRN 73
            PS  AVEAY+KGLKEREIP DDPRL+ VS+ LD+   + GP    RRN
Sbjct: 405 TPSLPAVEAYYKGLKEREIPSDDPRLMNVSRVLDNLSIRFGP----RRN 449


>ref|XP_002440585.1| hypothetical protein SORBIDRAFT_09g003510 [Sorghum bicolor]
           gi|241945870|gb|EES19015.1| hypothetical protein
           SORBIDRAFT_09g003510 [Sorghum bicolor]
          Length = 452

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/109 (60%), Positives = 84/109 (77%)
 Frame = -3

Query: 399 VGYTPGGMQLAEEKLKEMASRNFFLSPKMGNDLLIAASGEKTGGFTVANLVWDMMQARNY 220
           +GYTP GMQLA+E +++M SRNFFL+ ++G+DLL+AA+GE TGG+T AN VWD++Q+RN 
Sbjct: 346 IGYTPRGMQLAQETIEKMVSRNFFLNARLGSDLLLAAAGETTGGYTTANYVWDLLQSRNV 405

Query: 219 NPSFEAVEAYHKGLKEREIPQDDPRLLLVSKRLDDWHKKLGPSPISRRN 73
            P   AVEAYHKGL  REIP DDPRLL VS+ LD+   + GP    RRN
Sbjct: 406 TPYLTAVEAYHKGLMAREIPSDDPRLLNVSRVLDNLQLRFGP----RRN 450


>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial [Vitis vinifera]
           gi|296087577|emb|CBI34833.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/104 (60%), Positives = 82/104 (78%)
 Frame = -3

Query: 399 VGYTPGGMQLAEEKLKEMASRNFFLSPKMGNDLLIAASGEKTGGFTVANLVWDMMQARNY 220
           VGYTP GM+LA++ L +M +R FFLSP+MG++LL+ ASGEKTGG+T AN +WD+MQAR  
Sbjct: 339 VGYTPKGMELAQDTLVKMNARGFFLSPRMGSELLLVASGEKTGGYTTANYIWDLMQARKI 398

Query: 219 NPSFEAVEAYHKGLKEREIPQDDPRLLLVSKRLDDWHKKLGPSP 88
            PSF AVEAY+ GL+EREIP+DD RL+LVS+  D+   + G  P
Sbjct: 399 TPSFPAVEAYYNGLREREIPEDDARLVLVSRAYDNQRLRFGTGP 442


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