BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00015009
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   101   7e-20
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]    86   2e-15
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    59   3e-07
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      59   3e-07
gb|ABA94768.1| transposon protein, putative, unclassified [Oryza...    59   5e-07

>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  101 bits (251), Expect = 7e-20
 Identities = 59/142 (41%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
 Frame = +2

Query: 5   FRLNYNMNKRAYSLPELLTELQAAEGLFQQS---VKVNVAEXXXXXXXXXXXXXXXXXXX 175
           FRLNYNMNK  ++L +LL EL AA+ + +Q    V +N+                     
Sbjct: 492 FRLNYNMNKMDFTLSKLLNELVAAQTIIKQGAAPVVLNIERVFSSVQKKGKKKKNVKPNN 551

Query: 176 XXXXXXXXXXXXXXXXXCFRCKQSGHWKADCP--LLKKANNTGMSLSLVTETYSAVLSTD 349
                            CF CKQ  HWK  CP  L KK   T     LV ET  AVL+T 
Sbjct: 552 NGAANGVNGVVKKPKGKCFHCKQPSHWKLQCPTWLAKKKQGTSPFHLLVVETCLAVLTTH 611

Query: 350 TWCVDTGATDHVCNSLQGFQRT 415
            WCVD GAT+HVCNSLQGFQ T
Sbjct: 612 QWCVDLGATNHVCNSLQGFQET 633


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/65 (63%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
 Frame = +2

Query: 227 CFRCKQSGHWKADCP--LLKKANNTGMSLSLVTETYSAVLSTDTWCVDTGATDHVCNSLQ 400
           CF CKQ GHWK  CP  L KK   T     LV ET  AVL+T  WCVD+GAT+HVCNSLQ
Sbjct: 217 CFHCKQPGHWKLQCPTWLAKKKQGTSPFHLLVVETCLAVLTTHQWCVDSGATNHVCNSLQ 276

Query: 401 GFQRT 415
           GFQ T
Sbjct: 277 GFQET 281


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
 Frame = +2

Query: 227 CFRCKQSGHWKADCPL----LKKANNTGMSLSL---VTETYSAVLSTDTWCVDTGATDHV 385
           CF CK++GHWK +C      LK+    G S +    V E   A  STD+W  DTG+  H+
Sbjct: 229 CFFCKEAGHWKRNCKKYLEQLKQKQQDGKSSTSGINVIEINLATSSTDSWVFDTGSVAHI 288

Query: 386 CNSLQGFQRT 415
           C SLQG +R+
Sbjct: 289 CKSLQGLKRS 298


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
 Frame = +2

Query: 227 CFRCKQSGHWKADCP-----LLKKANNTGMSLSLVTETYSAVLSTDTWCVDTGATDHVCN 391
           CF CK++GHWK +C      L KK + T  S   V +   A   TD+W  DTG+  H C 
Sbjct: 255 CFYCKETGHWKRNCKKYMEDLKKKQSTTSASGINVIDINLATSPTDSWVFDTGSVAHSCK 314

Query: 392 SLQGFQRT 415
           SLQG +R+
Sbjct: 315 SLQGMRRS 322


>gb|ABA94768.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 1144

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
 Frame = +2

Query: 227 CFRCKQSGHWKADCP------LLKKANNTGMSLSLVTETYSAVLSTDTWCVDTGATDHVC 388
           C  CK++GH+K DCP      + +K  N    ++ V E+Y    S  TW +D+GAT H C
Sbjct: 149 CLHCKKTGHYKKDCPDFLKMIMARKGENI---ITFVNESYYVGYSRSTWWIDSGATIHAC 205

Query: 389 NSLQGFQRT 415
           N L+ F+ T
Sbjct: 206 NCLKAFRST 214