BLASTX nr result

ID: Bupleurum21_contig00014979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014979
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyra...    64   1e-08
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha...    62   4e-08
ref|XP_002893234.1| hypothetical protein ARALYDRAFT_889762 [Arab...    62   4e-08
gb|AAM63145.1| unknown [Arabidopsis thaliana]                          62   4e-08
gb|AFK34661.1| unknown [Lotus japonicus]                               61   8e-08

>ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333261|gb|EFH63679.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -2

Query: 285 FNVPCQANCSHWFCGNCILQVWNHGST 205
           F  PCQANCSHWFCGNCI+QVW HGST
Sbjct: 17  FTAPCQANCSHWFCGNCIMQVWRHGST 43


>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|110740529|dbj|BAE98370.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
           C3HC4-type RING finger protein [Arabidopsis thaliana]
          Length = 185

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -2

Query: 285 FNVPCQANCSHWFCGNCILQVWNHGST 205
           FN PCQ+NCSHWFCGNCI+ VW HGST
Sbjct: 17  FNAPCQSNCSHWFCGNCIMLVWRHGST 43


>ref|XP_002893234.1| hypothetical protein ARALYDRAFT_889762 [Arabidopsis lyrata subsp.
           lyrata] gi|297339076|gb|EFH69493.1| hypothetical protein
           ARALYDRAFT_889762 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -2

Query: 285 FNVPCQANCSHWFCGNCILQVWNHGST 205
           FN PCQ+NCSHWFCGNCI+ VW HGST
Sbjct: 17  FNTPCQSNCSHWFCGNCIMLVWRHGST 43


>gb|AAM63145.1| unknown [Arabidopsis thaliana]
          Length = 185

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = -2

Query: 285 FNVPCQANCSHWFCGNCILQVWNHGST 205
           FN PCQ+NCSHWFCGNCI+ VW HGST
Sbjct: 17  FNAPCQSNCSHWFCGNCIMLVWRHGST 43


>gb|AFK34661.1| unknown [Lotus japonicus]
          Length = 188

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -2

Query: 288 DFNVPCQANCSHWFCGNCILQVWNHGS 208
           +F++PCQANCSHWFC NCI+ VWNHGS
Sbjct: 18  NFHIPCQANCSHWFCANCIMLVWNHGS 44


Top