BLASTX nr result

ID: Bupleurum21_contig00014968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014968
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|1...   221   7e-56
ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|2...   218   6e-55
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   216   2e-54
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   212   4e-53
ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   207   1e-51

>ref|XP_002315361.1| predicted protein [Populus trichocarpa] gi|118489920|gb|ABK96757.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864401|gb|EEF01532.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score =  221 bits (563), Expect = 7e-56
 Identities = 100/112 (89%), Positives = 107/112 (95%)
 Frame = +2

Query: 53  AAQIPTSFGHELRACLRCKLVKTYDQFRESGCENCPFFKMDEDNERVVECTTPNFTGLIS 232
           AAQIPTSFGHELRACLRC+LVKTYDQFRESGCENCPFFKMDED+ERVV+CTTPNFTG+IS
Sbjct: 5   AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIIS 64

Query: 233 VMDPNRSWAARWLRIGRFRPGCYTLAVSEALSADLQNLCEDEHVPYVPPKGI 388
           VMDP+RSWAARWLRIGRF PGCYTLAVSEAL  DLQNLCEDE VPY+PPK +
Sbjct: 65  VMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116


>ref|XP_002310913.1| predicted protein [Populus trichocarpa] gi|222850733|gb|EEE88280.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  218 bits (555), Expect = 6e-55
 Identities = 99/112 (88%), Positives = 106/112 (94%)
 Frame = +2

Query: 53  AAQIPTSFGHELRACLRCKLVKTYDQFRESGCENCPFFKMDEDNERVVECTTPNFTGLIS 232
           AAQIPTSFGHELRACLRC+LVKTYDQFRESGCENC FFKMDED+ERVV+CTTPNFTG+IS
Sbjct: 5   AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPNFTGIIS 64

Query: 233 VMDPNRSWAARWLRIGRFRPGCYTLAVSEALSADLQNLCEDEHVPYVPPKGI 388
           VMDP+RSWAARWLRIGRF PGCYTLAVSEAL  DLQNLCEDE VPY+PPK +
Sbjct: 65  VMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  216 bits (550), Expect = 2e-54
 Identities = 98/113 (86%), Positives = 107/113 (94%)
 Frame = +2

Query: 44  MAHAAQIPTSFGHELRACLRCKLVKTYDQFRESGCENCPFFKMDEDNERVVECTTPNFTG 223
           M++AAQIPTSFGHELRACLRC+LVKTYDQFRESGCENCPFFKMDED+ERVV+CTTPNF G
Sbjct: 1   MSNAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNG 60

Query: 224 LISVMDPNRSWAARWLRIGRFRPGCYTLAVSEALSADLQNLCEDEHVPYVPPK 382
           +IS+MDP+RSWAARWLRIGRF PGCYTLAVSEAL  DLQNLCE+E V YVPPK
Sbjct: 61  IISMMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYVPPK 113


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  212 bits (539), Expect = 4e-53
 Identities = 97/111 (87%), Positives = 102/111 (91%)
 Frame = +2

Query: 56  AQIPTSFGHELRACLRCKLVKTYDQFRESGCENCPFFKMDEDNERVVECTTPNFTGLISV 235
           AQIPTSFGHELRACLRC+LVKTYDQFRESGCENCPFFKMDED+ERVVECTTPNF G+ISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFNGIISV 65

Query: 236 MDPNRSWAARWLRIGRFRPGCYTLAVSEALSADLQNLCEDEHVPYVPPKGI 388
           MDP RSWAARWLRIGRF PGCYTLAVSEAL  DLQNLCE+E V Y PPK +
Sbjct: 66  MDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPKRV 116


>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  207 bits (527), Expect = 1e-51
 Identities = 95/111 (85%), Positives = 101/111 (90%)
 Frame = +2

Query: 56  AQIPTSFGHELRACLRCKLVKTYDQFRESGCENCPFFKMDEDNERVVECTTPNFTGLISV 235
           AQIPTSFGHELRACLRC+LVKTYDQFRESGCENCPFFKMDED+ERVV+CTTPNF G+ISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65

Query: 236 MDPNRSWAARWLRIGRFRPGCYTLAVSEALSADLQNLCEDEHVPYVPPKGI 388
           MDP RSWAARWLRIGRF PGCYTLAVSEAL  DLQ LCE+E V Y PPK +
Sbjct: 66  MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPKRV 116


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