BLASTX nr result

ID: Bupleurum21_contig00014963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014963
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II tra...   253   2e-65
ref|XP_002531587.1| Cofactor required for Sp1 transcriptional ac...   251   5e-65
ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|2...   250   1e-64
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...   248   3e-64
dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]                       245   4e-63

>ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7
           [Vitis vinifera] gi|297739781|emb|CBI29963.3| unnamed
           protein product [Vitis vinifera]
          Length = 168

 Score =  253 bits (645), Expect = 2e-65
 Identities = 129/155 (83%), Positives = 132/155 (85%)
 Frame = +3

Query: 81  MATAAYXXXXXFYRLYKDYNQNXXXXXXXXXXXXGTYVLFGANYTTDDALPSLEEQGVRQ 260
           MATA Y     +YRLYKDY QN            GTY LFGA YTTDD LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYIQNPKSAPEPPPPIEGTYALFGATYTTDDVLPSLEEQGVRQ 60

Query: 261 LYPKGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSL 440
           LYPKG NVDFKKELRSLNRELQLH+LELAD+LVERPSQYARRVEDISLIFKNLHHLLNSL
Sbjct: 61  LYPKGSNVDFKKELRSLNRELQLHLLELADVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 441 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 545
           RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 155


>ref|XP_002531587.1| Cofactor required for Sp1 transcriptional activation subunit,
           putative [Ricinus communis] gi|223528783|gb|EEF30790.1|
           Cofactor required for Sp1 transcriptional activation
           subunit, putative [Ricinus communis]
          Length = 168

 Score =  251 bits (641), Expect = 5e-65
 Identities = 128/155 (82%), Positives = 133/155 (85%)
 Frame = +3

Query: 81  MATAAYXXXXXFYRLYKDYNQNXXXXXXXXXXXXGTYVLFGANYTTDDALPSLEEQGVRQ 260
           MATAAY     +YRLYKDY +N            GTY  FGANYTT+  LPSLEEQGVRQ
Sbjct: 1   MATAAYPPPPPYYRLYKDYIENPKSAPEPPPPIDGTYTCFGANYTTEYVLPSLEEQGVRQ 60

Query: 261 LYPKGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSL 440
           LYPKGPNVDFKKELRSLNRELQLHILEL+D+LVERPSQYARRVEDISLIFKNLHHLLNSL
Sbjct: 61  LYPKGPNVDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 441 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 545
           RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 155


>ref|XP_002323352.1| predicted protein [Populus trichocarpa] gi|222867982|gb|EEF05113.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  250 bits (638), Expect = 1e-64
 Identities = 127/155 (81%), Positives = 133/155 (85%)
 Frame = +3

Query: 81  MATAAYXXXXXFYRLYKDYNQNXXXXXXXXXXXXGTYVLFGANYTTDDALPSLEEQGVRQ 260
           MATA +     FYRLYKDY +N            GTYV F ++YTTDD LPSLEEQGVRQ
Sbjct: 1   MATATFPPPPPFYRLYKDYIENPKSAPEPPPPIEGTYVCFASSYTTDDVLPSLEEQGVRQ 60

Query: 261 LYPKGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSL 440
           LYPKGPNVDFKKELRSLNRELQLHILELAD+LVERPSQYARRVEDISLIFKNLHHLLNSL
Sbjct: 61  LYPKGPNVDFKKELRSLNRELQLHILELADVLVERPSQYARRVEDISLIFKNLHHLLNSL 120

Query: 441 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 545
           RPHQARATLIHILELQIQRRKQAVEDIKR+REEAQ
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRQREEAQ 155


>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score =  248 bits (634), Expect = 3e-64
 Identities = 125/155 (80%), Positives = 134/155 (86%)
 Frame = +3

Query: 81  MATAAYXXXXXFYRLYKDYNQNXXXXXXXXXXXXGTYVLFGANYTTDDALPSLEEQGVRQ 260
           MATA Y     FY+LYKDY Q+            GTY+ FG+NYTTDD LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPFYKLYKDYLQDPKSAPEPPPPIEGTYMCFGSNYTTDDVLPSLEEQGVRQ 60

Query: 261 LYPKGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSL 440
           LYP+GPNVD+KKELRSLNRELQLHILELADILVERPSQYARRVE+ISLIFKNLHHLLNSL
Sbjct: 61  LYPRGPNVDYKKELRSLNRELQLHILELADILVERPSQYARRVEEISLIFKNLHHLLNSL 120

Query: 441 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 545
           RPHQARATLIHILELQI+RR+QAVEDIKRRREEAQ
Sbjct: 121 RPHQARATLIHILELQIERRRQAVEDIKRRREEAQ 155


>dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]
          Length = 168

 Score =  245 bits (625), Expect = 4e-63
 Identities = 124/155 (80%), Positives = 130/155 (83%)
 Frame = +3

Query: 81  MATAAYXXXXXFYRLYKDYNQNXXXXXXXXXXXXGTYVLFGANYTTDDALPSLEEQGVRQ 260
           MATA Y     +YRLYKDY QN            GTYV FGANYTT D LPSLEEQGVRQ
Sbjct: 1   MATATYPPPPPYYRLYKDYLQNPDSAPEPPPPIEGTYVCFGANYTTSDVLPSLEEQGVRQ 60

Query: 261 LYPKGPNVDFKKELRSLNRELQLHILELADILVERPSQYARRVEDISLIFKNLHHLLNSL 440
           LY KGPN+DFKKELRSLN ELQLHILELADIL+ERPSQYARRVE+IS +FKNLHHLLNSL
Sbjct: 61  LYSKGPNIDFKKELRSLNAELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSL 120

Query: 441 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAQ 545
           RPHQARATLIHILELQIQRRKQAVEDIKRRREEA+
Sbjct: 121 RPHQARATLIHILELQIQRRKQAVEDIKRRREEAR 155


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