BLASTX nr result

ID: Bupleurum21_contig00014962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014962
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   265   2e-68
ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   247   3e-63
ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [S...   241   2e-61
tpg|DAA56458.1| TPA: hypothetical protein ZEAMMB73_571187 [Zea m...   238   1e-60
ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60

>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
           gi|297734721|emb|CBI16955.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  265 bits (676), Expect = 2e-68
 Identities = 141/211 (66%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
 Frame = -1

Query: 816 PHSSISCLQIRSVPRTV-VYCYSTSSDKGVNIEIIGKELLGLSDEQLLSQCDQTTFKSSG 640
           P SS S   + +  R   + C  + S +  +     +E LGLSDEQL+ QC+ +TFKSSG
Sbjct: 14  PSSSPSLTAVATARRKFGMSCRMSFSSENSSSGSGSREFLGLSDEQLMKQCEMSTFKSSG 73

Query: 639 PGGQHRNKRETAVRLKHLPTGIVAQAAEDRSQHMNRASALTRLRTMLALKVRNTIDLDTY 460
           PGGQHRNKRE+AVRLKHLPTGI+AQA EDRSQH NRASAL RLRT+LALKVRN+IDLDTY
Sbjct: 74  PGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALARLRTLLALKVRNSIDLDTY 133

Query: 459 SPPQELLQILPARSTIRGKDCGSQIGPKNPKFVLGMQALLDLICAVEGSVADAAKKLGLS 280
           SPP ELLQILPA+STIR  DCG QIGP NPKF LGM ALLDLI AVEGS++DAAK +GLS
Sbjct: 134 SPPLELLQILPAKSTIRTSDCGPQIGPNNPKFALGMLALLDLIFAVEGSISDAAKLMGLS 193

Query: 279 TGAXXXXXXXXXXXRMAVNEFRASKGMKPLK 187
           TGA           RMAVNE R SKG+KPLK
Sbjct: 194 TGALSRLVLSDDSLRMAVNELRTSKGLKPLK 224


>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  247 bits (630), Expect = 3e-63
 Identities = 123/172 (71%), Positives = 143/172 (83%)
 Frame = -1

Query: 702 LGLSDEQLLSQCDQTTFKSSGPGGQHRNKRETAVRLKHLPTGIVAQAAEDRSQHMNRASA 523
           L LSDE+L+ QC+  TFK+SGPGGQHRNKRE+AVRLKHLPTGI+AQA+EDRSQH NRASA
Sbjct: 79  LNLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQASEDRSQHKNRASA 138

Query: 522 LTRLRTMLALKVRNTIDLDTYSPPQELLQILPARSTIRGKDCGSQIGPKNPKFVLGMQAL 343
           + RLR+++ALKVR T+DL+ YSPP+ELLQILP +S+IRG DCGSQIGP NPKF  GMQAL
Sbjct: 139 INRLRSLIALKVRKTVDLEAYSPPRELLQILPPKSSIRGSDCGSQIGPNNPKFASGMQAL 198

Query: 342 LDLICAVEGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRASKGMKPLK 187
           LDLI AVEGSV++AAK LGLSTGA           R  VN+ RA+KGMKPLK
Sbjct: 199 LDLIFAVEGSVSEAAKYLGLSTGALSRLILSDDSLRKEVNDLRATKGMKPLK 250


>ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
           gi|241930860|gb|EES04005.1| hypothetical protein
           SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score =  241 bits (615), Expect = 2e-61
 Identities = 122/174 (70%), Positives = 141/174 (81%)
 Frame = -1

Query: 708 ELLGLSDEQLLSQCDQTTFKSSGPGGQHRNKRETAVRLKHLPTGIVAQAAEDRSQHMNRA 529
           + LG+SDE+L+ QCD  TFK+SGPGGQHRNKRE+AVRLKHLPTGI+AQA EDRSQH NRA
Sbjct: 86  DYLGMSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 145

Query: 528 SALTRLRTMLALKVRNTIDLDTYSPPQELLQILPARSTIRGKDCGSQIGPKNPKFVLGMQ 349
           SAL+RLRT++ALKVR  I+LD Y+PP ELLQILP +ST+RGKD G QIGP N KF  GMQ
Sbjct: 146 SALSRLRTLIALKVRRPINLDDYTPPVELLQILPLKSTVRGKDVGPQIGPNNSKFSPGMQ 205

Query: 348 ALLDLICAVEGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRASKGMKPLK 187
           ALLDL+ AVEGS++DAAK LGLSTGA           R A NE RASKG+KPL+
Sbjct: 206 ALLDLLFAVEGSISDAAKILGLSTGALSRLILSDDSLRTAANELRASKGLKPLR 259


>tpg|DAA56458.1| TPA: hypothetical protein ZEAMMB73_571187 [Zea mays]
          Length = 253

 Score =  238 bits (608), Expect = 1e-60
 Identities = 121/174 (69%), Positives = 141/174 (81%)
 Frame = -1

Query: 708 ELLGLSDEQLLSQCDQTTFKSSGPGGQHRNKRETAVRLKHLPTGIVAQAAEDRSQHMNRA 529
           + LG+SDE+L+ QCD  TFK+SGPGGQHRNKRE+AVRLKHLPTGI+AQA EDRSQH NRA
Sbjct: 80  DYLGMSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRA 139

Query: 528 SALTRLRTMLALKVRNTIDLDTYSPPQELLQILPARSTIRGKDCGSQIGPKNPKFVLGMQ 349
           SAL+RLRT++ALKVR  I+L+ Y+PP ELLQILP +S++RGKD G QIGP N KF  GMQ
Sbjct: 140 SALSRLRTLIALKVRRPINLEDYTPPVELLQILPLKSSVRGKDVGPQIGPNNSKFSPGMQ 199

Query: 348 ALLDLICAVEGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRASKGMKPLK 187
           ALLDL+ AVEGSV+DAAK LGLSTGA           R A NE RASKG+KPL+
Sbjct: 200 ALLDLLFAVEGSVSDAAKILGLSTGALSRLILSDDSLRTAANELRASKGLKPLR 253


>ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|222870969|gb|EEF08100.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  238 bits (608), Expect = 1e-60
 Identities = 121/190 (63%), Positives = 148/190 (77%)
 Frame = -1

Query: 774 RTVVYCYSTSSDKGVNIEIIGKELLGLSDEQLLSQCDQTTFKSSGPGGQHRNKRETAVRL 595
           R + + Y+TS+  G      G   L L+D++L+ QC+  TFK+SGPGGQHRNKRE+AVRL
Sbjct: 72  RLICFNYNTSASHGN-----GTNYLELTDDELMRQCEMDTFKASGPGGQHRNKRESAVRL 126

Query: 594 KHLPTGIVAQAAEDRSQHMNRASALTRLRTMLALKVRNTIDLDTYSPPQELLQILPARST 415
           KHLPTGI+AQA EDRSQHMNRASAL RLR +LA++VRN++D+D+Y+P  ELLQILP +ST
Sbjct: 127 KHLPTGIIAQAVEDRSQHMNRASALKRLRALLAIRVRNSLDIDSYTPRLELLQILPLKST 186

Query: 414 IRGKDCGSQIGPKNPKFVLGMQALLDLICAVEGSVADAAKKLGLSTGAXXXXXXXXXXXR 235
           IRG DCG QIGPKNPKF+LGMQALLDLI AV+GS+++A K LGLSTGA           R
Sbjct: 187 IRGSDCGPQIGPKNPKFILGMQALLDLIFAVDGSISEAGKLLGLSTGALSRLILSDDSLR 246

Query: 234 MAVNEFRASK 205
           MAVN+ R SK
Sbjct: 247 MAVNDLRNSK 256


Top