BLASTX nr result

ID: Bupleurum21_contig00014958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014958
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK25850.1|AF360140_1 putative pectate lyase [Arabidopsis tha...   136   2e-30
ref|NP_567707.1| putative pectate lyase 18 [Arabidopsis thaliana...   136   2e-30
emb|CAA22985.1| putative pectate lyase [Arabidopsis thaliana] gi...   136   2e-30
ref|XP_002867644.1| pectate lyase family protein [Arabidopsis ly...   136   2e-30
gb|AAM65103.1| putative pectate lyase [Arabidopsis thaliana]          133   2e-29

>gb|AAK25850.1|AF360140_1 putative pectate lyase [Arabidopsis thaliana]
          Length = 408

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -1

Query: 365 INSQGNRFLAPNIQFSKEVTKHEDAPQSQWKHWNWRSEGDLLLNGAYFTPXXXXXXXXXX 186
           INSQGNRFLAPNI+FSKEVTKHEDAP+S+WK WNWRS GDLLLNGA+FTP          
Sbjct: 318 INSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYA 377

Query: 185 XXXXXXARPSTLVGPLTSNSGVLNCRKGSHC 93
                 A+PS+LVGPLTS SG LNCRKGS C
Sbjct: 378 KASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408


>ref|NP_567707.1| putative pectate lyase 18 [Arabidopsis thaliana]
           gi|334186896|ref|NP_001190827.1| putative pectate lyase
           18 [Arabidopsis thaliana]
           gi|32129908|sp|Q9C5M8.2|PEL18_ARATH RecName:
           Full=Probable pectate lyase 18; AltName: Full=Pectate
           lyase A10; Flags: Precursor gi|57222166|gb|AAW38990.1|
           At4g24780 [Arabidopsis thaliana]
           gi|332659555|gb|AEE84955.1| putative pectate lyase 18
           [Arabidopsis thaliana] gi|332659556|gb|AEE84956.1|
           putative pectate lyase 18 [Arabidopsis thaliana]
          Length = 408

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -1

Query: 365 INSQGNRFLAPNIQFSKEVTKHEDAPQSQWKHWNWRSEGDLLLNGAYFTPXXXXXXXXXX 186
           INSQGNRFLAPNI+FSKEVTKHEDAP+S+WK WNWRS GDLLLNGA+FTP          
Sbjct: 318 INSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYA 377

Query: 185 XXXXXXARPSTLVGPLTSNSGVLNCRKGSHC 93
                 A+PS+LVGPLTS SG LNCRKGS C
Sbjct: 378 KASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408


>emb|CAA22985.1| putative pectate lyase [Arabidopsis thaliana]
           gi|7269329|emb|CAB79388.1| putative pectate lyase
           [Arabidopsis thaliana]
          Length = 404

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -1

Query: 365 INSQGNRFLAPNIQFSKEVTKHEDAPQSQWKHWNWRSEGDLLLNGAYFTPXXXXXXXXXX 186
           INSQGNRFLAPNI+FSKEVTKHEDAP+S+WK WNWRS GDLLLNGA+FTP          
Sbjct: 314 INSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYA 373

Query: 185 XXXXXXARPSTLVGPLTSNSGVLNCRKGSHC 93
                 A+PS+LVGPLTS SG LNCRKGS C
Sbjct: 374 KASSLGAKPSSLVGPLTSTSGALNCRKGSRC 404


>ref|XP_002867644.1| pectate lyase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313480|gb|EFH43903.1| pectate lyase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/91 (70%), Positives = 70/91 (76%)
 Frame = -1

Query: 365 INSQGNRFLAPNIQFSKEVTKHEDAPQSQWKHWNWRSEGDLLLNGAYFTPXXXXXXXXXX 186
           INSQGNRFLAPNI+FSKEVTKHEDAP+S+WK WNWRS GDLLLNGA+FTP          
Sbjct: 316 INSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYA 375

Query: 185 XXXXXXARPSTLVGPLTSNSGVLNCRKGSHC 93
                 A+PS+LVGPLTS SG LNCRKGS C
Sbjct: 376 KASSLGAKPSSLVGPLTSTSGALNCRKGSRC 406


>gb|AAM65103.1| putative pectate lyase [Arabidopsis thaliana]
          Length = 406

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/91 (69%), Positives = 69/91 (75%)
 Frame = -1

Query: 365 INSQGNRFLAPNIQFSKEVTKHEDAPQSQWKHWNWRSEGDLLLNGAYFTPXXXXXXXXXX 186
           INSQGNRFLAPNI+FSKEVTK EDAP+S+WK WNWRS GDLLLNGA+FTP          
Sbjct: 316 INSQGNRFLAPNIRFSKEVTKDEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYA 375

Query: 185 XXXXXXARPSTLVGPLTSNSGVLNCRKGSHC 93
                 A+PS+LVGPLTS SG LNCRKGS C
Sbjct: 376 KASSLGAKPSSLVGPLTSTSGALNCRKGSRC 406


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