BLASTX nr result

ID: Bupleurum21_contig00014956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014956
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304084.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002336508.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002332430.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002332429.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_004167246.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-rela...   157   8e-37

>ref|XP_002304084.1| predicted protein [Populus trichocarpa] gi|222841516|gb|EEE79063.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/94 (81%), Positives = 87/94 (92%)
 Frame = +2

Query: 2   HAPIVSSYNDKIRPLLDAIDKLRNLKVMQEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 181
           H PIVSS+N++IRPLLDA+DKLR+L+VM+EGIQLPTIVVVGDQSSGKSSVLESLAGISLP
Sbjct: 27  HVPIVSSFNERIRPLLDAVDKLRHLQVMKEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 86

Query: 182 RGQGICTRVPLIMRLHHHSKPHSELHLEYSGKVV 283
           RGQGICTRVPLIMRL HH+ P  EL LE++GK V
Sbjct: 87  RGQGICTRVPLIMRLQHHTAPEPELSLEFNGKTV 120


>ref|XP_002336508.1| predicted protein [Populus trichocarpa] gi|222835797|gb|EEE74232.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/94 (81%), Positives = 87/94 (92%)
 Frame = +2

Query: 2   HAPIVSSYNDKIRPLLDAIDKLRNLKVMQEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 181
           H PIVSS+N++IRPLLDA+DKLR+L+VM+EGIQLPTIVVVGDQSSGKSSVLESLAGISLP
Sbjct: 41  HVPIVSSFNERIRPLLDAVDKLRHLQVMKEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 100

Query: 182 RGQGICTRVPLIMRLHHHSKPHSELHLEYSGKVV 283
           RGQGICTRVPLIMRL HH+ P  EL LE++GK V
Sbjct: 101 RGQGICTRVPLIMRLQHHTAPEPELSLEFNGKTV 134


>ref|XP_002332430.1| predicted protein [Populus trichocarpa] gi|222832399|gb|EEE70876.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/94 (81%), Positives = 87/94 (92%)
 Frame = +2

Query: 2   HAPIVSSYNDKIRPLLDAIDKLRNLKVMQEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 181
           H PIVSS+N++IRPLLDA+DKLR+L+VM+EGIQLPTIVVVGDQSSGKSSVLESLAGISLP
Sbjct: 28  HVPIVSSFNERIRPLLDAVDKLRHLQVMKEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 87

Query: 182 RGQGICTRVPLIMRLHHHSKPHSELHLEYSGKVV 283
           RGQGICTRVPLIMRL HH+ P  EL LE++GK V
Sbjct: 88  RGQGICTRVPLIMRLQHHTAPEPELSLEFNGKTV 121


>ref|XP_002332429.1| predicted protein [Populus trichocarpa] gi|222832398|gb|EEE70875.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/94 (81%), Positives = 87/94 (92%)
 Frame = +2

Query: 2   HAPIVSSYNDKIRPLLDAIDKLRNLKVMQEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 181
           H PIVSS+N++IRPLLDA+DKLR+L+VM+EGIQLPTIVVVGDQSSGKSSVLESLAGISLP
Sbjct: 28  HVPIVSSFNERIRPLLDAVDKLRHLQVMKEGIQLPTIVVVGDQSSGKSSVLESLAGISLP 87

Query: 182 RGQGICTRVPLIMRLHHHSKPHSELHLEYSGKVV 283
           RGQGICTRVPLIMRL HH+ P  EL LE++GK V
Sbjct: 88  RGQGICTRVPLIMRLQHHTAPEPELSLEFNGKTV 121


>ref|XP_004167246.1| PREDICTED: LOW QUALITY PROTEIN: dynamin-related protein 4C-like
           [Cucumis sativus]
          Length = 685

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/93 (81%), Positives = 86/93 (92%)
 Frame = +2

Query: 5   APIVSSYNDKIRPLLDAIDKLRNLKVMQEGIQLPTIVVVGDQSSGKSSVLESLAGISLPR 184
           APIVS YND+IRPL+DA+DKLR+L +M+EGIQLPTIVVVGDQSSGKSSVLESLAGISLPR
Sbjct: 47  APIVSCYNDRIRPLIDAVDKLRHLNIMKEGIQLPTIVVVGDQSSGKSSVLESLAGISLPR 106

Query: 185 GQGICTRVPLIMRLHHHSKPHSELHLEYSGKVV 283
           GQGICTRVPLIMRLH HS P +EL LE++GK +
Sbjct: 107 GQGICTRVPLIMRLHQHSAPQTELRLEFNGKSI 139


Top