BLASTX nr result

ID: Bupleurum21_contig00014932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014932
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532558.1| RING-H2 finger protein ATL2B, putative [Rici...   109   2e-22
ref|XP_002300476.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
emb|CBI26636.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|NP_001237925.1| uncharacterized protein LOC100305612 [Glycin...    78   6e-13
ref|XP_003617545.1| RING finger family protein [Medicago truncat...    73   2e-11

>ref|XP_002532558.1| RING-H2 finger protein ATL2B, putative [Ricinus communis]
           gi|223527713|gb|EEF29819.1| RING-H2 finger protein
           ATL2B, putative [Ricinus communis]
          Length = 223

 Score =  109 bits (273), Expect = 2e-22
 Identities = 67/153 (43%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
 Frame = +3

Query: 39  MKKWVLFSLVQNVRLMFNKAIQFLWVRFLH-IRVGV-VSTLMKKALCALTTCILXXXXXX 212
           M KW LFS +  V L   +A+  L +  +     G  +  ++KKA+ A  TCIL      
Sbjct: 1   MTKW-LFSGIIKVFLRCQEAVSMLVLGAMEGFGTGFFIIRMIKKAVFAAFTCILALGGAM 59

Query: 213 XXXXXXXLKGQTTETXXXXXXXXXXXXXXXXXXQLMDSFVNGEPFSKAALLYSLLNGKVF 392
                  +KGQTTET                  QL++S  +GEPFSK AL YSL+NGKVF
Sbjct: 60  VGTVIGAMKGQTTETGFIRGSGIGAVAGAVTAVQLLESVADGEPFSKVALFYSLMNGKVF 119

Query: 393 VEWVSPAVLKAYQWQVSSLDTGSIEISDLFEVS 491
           +EWVSPAVLKAYQWQ+S+L+T   EISD+ + S
Sbjct: 120 MEWVSPAVLKAYQWQMSALETTYREISDILDTS 152


>ref|XP_002300476.1| predicted protein [Populus trichocarpa] gi|222847734|gb|EEE85281.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/116 (45%), Positives = 71/116 (61%)
 Frame = +3

Query: 144 VSTLMKKALCALTTCILXXXXXXXXXXXXXLKGQTTETXXXXXXXXXXXXXXXXXXQLMD 323
           + +++K ++ A +TCI              +KGQTTET                  QL++
Sbjct: 37  IRSVLKNSVLAASTCIFALGGALVGSIIGAMKGQTTETGFLRGSGVGAVAGAITAVQLLE 96

Query: 324 SFVNGEPFSKAALLYSLLNGKVFVEWVSPAVLKAYQWQVSSLDTGSIEISDLFEVS 491
           S  NGEP SK ALL+SLLNGKVF+EWV PAVLKAYQWQV++L+T   EISD+++ S
Sbjct: 97  SITNGEPLSKVALLHSLLNGKVFMEWVGPAVLKAYQWQVNALETTYREISDIYDTS 152


>emb|CBI26636.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/118 (45%), Positives = 67/118 (56%)
 Frame = +3

Query: 138 GVVSTLMKKALCALTTCILXXXXXXXXXXXXXLKGQTTETXXXXXXXXXXXXXXXXXXQL 317
           G+V  +MK A+ A  TCI              +KGQTTET                  QL
Sbjct: 67  GLVFRVMKSAVLAAFTCIFALGGAVVGTITGAIKGQTTETGFFRGSGIGAVTGAITALQL 126

Query: 318 MDSFVNGEPFSKAALLYSLLNGKVFVEWVSPAVLKAYQWQVSSLDTGSIEISDLFEVS 491
           ++S   GE  SKAALL SL+NGKVF+EWVSPAVLKAYQWQ+S+L+T   E  D + +S
Sbjct: 127 LESVAAGESLSKAALLCSLVNGKVFMEWVSPAVLKAYQWQISTLETNYGETEDFYNIS 184


>ref|NP_001237925.1| uncharacterized protein LOC100305612 [Glycine max]
           gi|255626083|gb|ACU13386.1| unknown [Glycine max]
          Length = 236

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +3

Query: 135 VGVVSTLMKKALCALTTCILXXXXXXXXXXXXXLKGQTTETXXXXXXXXXXXXXXXXXXQ 314
           +G+ + ++KK L AL TCIL             +KGQTTE                   +
Sbjct: 36  LGLFTKIIKKVLFALFTCILALGGPIVGTIAGGIKGQTTEAGFLDGAGKGAITGAIAALE 95

Query: 315 LMDSFVNGEPFSKAALLYSLLNGKVFVEWVSPAVLKAYQWQ--VSSLDTGSIEISDLFEV 488
           L++     EP SK ALL SLLNGK+F+EW+ PAV K YQ    V++L+T   E+SD++++
Sbjct: 96  LINFDAFDEPISKVALLSSLLNGKIFMEWICPAVAKLYQLHVTVNTLETICQEVSDIYDI 155


>ref|XP_003617545.1| RING finger family protein [Medicago truncatula]
           gi|355518880|gb|AET00504.1| RING finger family protein
           [Medicago truncatula]
          Length = 236

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = +3

Query: 156 MKKALCALTTCILXXXXXXXXXXXXXLKGQTTETXXXXXXXXXXXXXXXXXXQLMDSFVN 335
           M++ L A  TCIL             +KGQTTET                  +LM     
Sbjct: 41  MERFLFAAFTCILALGGSIIGTIAGAIKGQTTETGFLDGAGKGAIAGAIAAIELMSFASV 100

Query: 336 GEPFSKAALLYSLLNGKVFVEWVSPAVLKAYQWQVSSLDTG-SIEISDLFE 485
            EPFSK ALL SLLNGKVF+EW+ P V +AY + ++SL+T     +SD+++
Sbjct: 101 AEPFSKVALLRSLLNGKVFMEWICPTVAQAYLFYINSLETAYGAVLSDIYD 151


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