BLASTX nr result

ID: Bupleurum21_contig00014925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014925
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   157   1e-36
ref|XP_002330570.1| high mobility group family [Populus trichoca...   153   1e-35
ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   149   3e-34
gb|AFK33347.1| unknown [Medicago truncatula]                          142   2e-32
gb|AFK40606.1| unknown [Medicago truncatula]                          142   4e-32

>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/98 (73%), Positives = 84/98 (85%)
 Frame = +3

Query: 207 DILQDSALFLEKLNNFHTYFGSKFKIPTIGGSALDLHHLFVEVTSRGGIDKVIKDRKWKE 386
           D++Q S LF EKL +FH  FG+KF +PT+GG ALDLHHLFVEVTSRGG++KV++DRKWKE
Sbjct: 39  DVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGKALDLHHLFVEVTSRGGLEKVVRDRKWKE 98

Query: 387 VIMVFKYPSTITSASFVLRKYYQSLLYHFEQVYYFRKK 500
           VI  F +PSTITSASFVLRKYY SLLYHFEQVY F K+
Sbjct: 99  VIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQFHKQ 136


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/98 (74%), Positives = 82/98 (83%)
 Frame = +3

Query: 207 DILQDSALFLEKLNNFHTYFGSKFKIPTIGGSALDLHHLFVEVTSRGGIDKVIKDRKWKE 386
           DI Q S LF EKL  FH  FG+KF +PT+GG ALDLHHLFVEVTSRGGI+KVI DRKWKE
Sbjct: 40  DIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRKWKE 99

Query: 387 VIMVFKYPSTITSASFVLRKYYQSLLYHFEQVYYFRKK 500
           VI  F +P+TITSASFVLRK+Y SLLYHFEQVY+F K+
Sbjct: 100 VITAFNFPTTITSASFVLRKHYLSLLYHFEQVYHFNKQ 137


>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/98 (69%), Positives = 84/98 (85%)
 Frame = +3

Query: 207 DILQDSALFLEKLNNFHTYFGSKFKIPTIGGSALDLHHLFVEVTSRGGIDKVIKDRKWKE 386
           +++Q + LF + L +FH  FG+KF +PT GG ALDLH LFVEVTSRGG++KVI+DRKWKE
Sbjct: 49  EVVQSADLFWQTLKDFHRSFGTKFMVPTTGGKALDLHRLFVEVTSRGGLEKVIRDRKWKE 108

Query: 387 VIMVFKYPSTITSASFVLRKYYQSLLYHFEQVYYFRKK 500
           V  VFK+P+TITSASFVLRKYY SLL+H+EQVYYFRK+
Sbjct: 109 VTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYYFRKQ 146


>gb|AFK33347.1| unknown [Medicago truncatula]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/98 (69%), Positives = 80/98 (81%)
 Frame = +3

Query: 207 DILQDSALFLEKLNNFHTYFGSKFKIPTIGGSALDLHHLFVEVTSRGGIDKVIKDRKWKE 386
           D+++DS LF +KL +FH   G+K KIPTIGG +LDLHHLFVEVTSRGGI+KVI DRKWKE
Sbjct: 38  DLVRDSNLFQQKLQSFHDSLGTKLKIPTIGGKSLDLHHLFVEVTSRGGIEKVIVDRKWKE 97

Query: 387 VIMVFKYPSTITSASFVLRKYYQSLLYHFEQVYYFRKK 500
           VIM F +  TITS SF++RK Y SLLYHFEQ YYF K+
Sbjct: 98  VIMSFNFRDTITSGSFMVRKTYLSLLYHFEQAYYFCKQ 135


>gb|AFK40606.1| unknown [Medicago truncatula]
          Length = 234

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/98 (69%), Positives = 79/98 (80%)
 Frame = +3

Query: 207 DILQDSALFLEKLNNFHTYFGSKFKIPTIGGSALDLHHLFVEVTSRGGIDKVIKDRKWKE 386
           D+++DS LF +KL +FH   G+K KIPTIGG  LDLHHLFVEVTSRGGI+KVI DRKWKE
Sbjct: 38  DLVRDSNLFQQKLQSFHDSLGTKLKIPTIGGKPLDLHHLFVEVTSRGGIEKVIVDRKWKE 97

Query: 387 VIMVFKYPSTITSASFVLRKYYQSLLYHFEQVYYFRKK 500
           VIM F +  TITS SF++RK Y SLLYHFEQ YYF K+
Sbjct: 98  VIMSFNFRDTITSGSFMVRKTYLSLLYHFEQAYYFCKQ 135


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