BLASTX nr result

ID: Bupleurum21_contig00014911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014911
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   476   e-132
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...   469   e-130
emb|CBI20214.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   456   e-126
ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   446   e-123

>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  476 bits (1225), Expect = e-132
 Identities = 240/331 (72%), Positives = 280/331 (84%), Gaps = 7/331 (2%)
 Frame = +1

Query: 10  CCGRRQFSAAT------PNKKQKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYR 171
           C   RQF+  T      PNKK+K+IVISGPTG+GK+RLALELAKRLNGEIVSADSVQVYR
Sbjct: 24  CRHGRQFATTTTCSIPVPNKKEKLIVISGPTGSGKTRLALELAKRLNGEIVSADSVQVYR 83

Query: 172 GLDIGSAKPSLSDRKEVTHHLIDILHPSEDYSVGQFYEEARQATKDILKSGRVPIVTGGT 351
           GLD+GSAKP+ S+RKEV HHL+DILHPSEDYSVGQFYE+ARQAT+DILK+GRVPIVTGGT
Sbjct: 84  GLDVGSAKPTESERKEVRHHLLDILHPSEDYSVGQFYEDARQATQDILKNGRVPIVTGGT 143

Query: 352 GMYLRWFIYGKPDVPKASPEIVAEVQAEISELERDGDWDAAVQLVVKAGDPSARSLAAND 531
           G+YLRWFIYGKPDVPKASPEI +EV +E++ELER+ DWDAAVQLVVKAGD  A+ LAAND
Sbjct: 144 GLYLRWFIYGKPDVPKASPEIASEVYSELAELERNKDWDAAVQLVVKAGDSQAQFLAAND 203

Query: 532 WYRIRRRLEIIKSSGLPPSAFQVPYDSFREQPKXXXXXXXXXXXXXXXXXXXXXXLDLDY 711
           WYR+RR LEIIK+SG PPSAFQVPY SF++Q                         DLDY
Sbjct: 204 WYRLRRSLEIIKTSGSPPSAFQVPYKSFKDQ---------FDTRLTDSSLDVNSSGDLDY 254

Query: 712 DFSCFFLSTPRMDLYRSIDWRCENMISGSDGILSEAKWLLNMGLMPNSNSATRAIGYRQA 891
           +F CFFLS+PR+DLY+SID+RCE+M++GS+GIL+EAKWLL+ GL+PNSNSATRAIGYRQA
Sbjct: 255 EFICFFLSSPRLDLYKSIDYRCEDMVAGSNGILTEAKWLLDEGLLPNSNSATRAIGYRQA 314

Query: 892 MEYLLQCKENGGSST-GDFFAFLSGFQKASR 981
           MEYLL+C+E+GGSS+ GDF+AFLS FQKASR
Sbjct: 315 MEYLLRCREDGGSSSAGDFYAFLSEFQKASR 345


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  469 bits (1206), Expect = e-130
 Identities = 231/324 (71%), Positives = 272/324 (83%), Gaps = 3/324 (0%)
 Frame = +1

Query: 19  RRQFSAAT--PNKKQKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYRGLDIGSA 192
           RR F+  T    K++KV+VISGPTGAGKSRLALELAKRLNGEI+SADSVQVYRGLD+GSA
Sbjct: 27  RRLFATTTCSATKREKVLVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSA 86

Query: 193 KPSLSDRKEVTHHLIDILHPSEDYSVGQFYEEARQATKDILKSGRVPIVTGGTGMYLRWF 372
           KPS ++RKEV HHLID+ HPSEDYSVG+F+E+ARQAT+DIL +GRVPIV GGTG+YLRWF
Sbjct: 87  KPSPTERKEVRHHLIDVSHPSEDYSVGKFFEDARQATRDILDNGRVPIVAGGTGLYLRWF 146

Query: 373 IYGKPDVPKASPEIVAEVQAEISELERDGDWDAAVQLVVKAGDPSARSLAANDWYRIRRR 552
           +YGKPDVPKASPEI ++V +E++EL+ + DWDAAVQLVV AGDP A+SL ANDWYR+RR 
Sbjct: 147 VYGKPDVPKASPEIASQVYSELAELQENQDWDAAVQLVVNAGDPRAQSLPANDWYRLRRS 206

Query: 553 LEIIKSSGLPPSAFQVPYDSFREQPKXXXXXXXXXXXXXXXXXXXXXXLDLDYDFSCFFL 732
           LEIIK++G PPS+FQVPYD F+EQ                         DLDYDF CFFL
Sbjct: 207 LEIIKATGSPPSSFQVPYDFFKEQLGTRLTESSLNANLAGDVSAKVKPKDLDYDFICFFL 266

Query: 733 STPRMDLYRSIDWRCENMISGSDGILSEAKWLLNMGLMPNSNSATRAIGYRQAMEYLLQC 912
           S+PR+DLYRSID+RCE+M+SG+DGILSEAKWLL+MGL+PNSNSATRAIGYRQAMEYLLQC
Sbjct: 267 SSPRLDLYRSIDYRCEDMLSGTDGILSEAKWLLDMGLLPNSNSATRAIGYRQAMEYLLQC 326

Query: 913 KENGG-SSTGDFFAFLSGFQKASR 981
           ++ GG SS G+F+AFLS FQKASR
Sbjct: 327 RQQGGRSSAGEFYAFLSEFQKASR 350


>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  456 bits (1174), Expect = e-126
 Identities = 230/318 (72%), Positives = 262/318 (82%), Gaps = 1/318 (0%)
 Frame = +1

Query: 31  SAATPNKKQKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYRGLDIGSAKPSLSD 210
           S      K+KVIVISGPTGAGKSRLALELAKRLNGEI+SADSVQVYRGLD+GSAKPSL D
Sbjct: 25  SGTKKKNKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLMD 84

Query: 211 RKEVTHHLIDILHPSEDYSVGQFYEEARQATKDILKSGRVPIVTGGTGMYLRWFIYGKPD 390
           RKEV HHL+DILHPSEDYSVGQF+E+AR+ T+DIL S RVPIV GGTG+YLRWFIYGKPD
Sbjct: 85  RKEVPHHLVDILHPSEDYSVGQFFEDAREKTRDILNSERVPIVAGGTGLYLRWFIYGKPD 144

Query: 391 VPKASPEIVAEVQAEISELERDGDWDAAVQLVVKAGDPSARSLAANDWYRIRRRLEIIKS 570
           VPKAS EI +EV +E+ +L+R+GDWDAAVQLVVKAGD  A+SLAANDWYR+RR LEIIKS
Sbjct: 145 VPKASREIASEVYSELMDLQRNGDWDAAVQLVVKAGDSKAQSLAANDWYRLRRSLEIIKS 204

Query: 571 SGLPPSAFQVPYDSFREQPKXXXXXXXXXXXXXXXXXXXXXXLDLDYDFSCFFLSTPRMD 750
           SG PPSAF VPYDSFREQP                        +LD++F CFFLS+ R++
Sbjct: 205 SGSPPSAFHVPYDSFREQPSSVDHSHDVNSSSDGSKENKSK--ELDFEFICFFLSSQRLE 262

Query: 751 LYRSIDWRCENMISGSDGILSEAKWLLNMGLMPNSNSATRAIGYRQAMEYLLQCKENGG- 927
           LYRSID RCE+M+ GSDGILSEA+WLL+ GL+PNSNSATRAIGYRQAMEYL+ C+E GG 
Sbjct: 263 LYRSIDLRCEDMLLGSDGILSEARWLLDNGLLPNSNSATRAIGYRQAMEYLVTCREQGGR 322

Query: 928 SSTGDFFAFLSGFQKASR 981
           SS  +F+AFLS FQKASR
Sbjct: 323 SSPQEFYAFLSEFQKASR 340


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  456 bits (1174), Expect = e-126
 Identities = 230/318 (72%), Positives = 262/318 (82%), Gaps = 1/318 (0%)
 Frame = +1

Query: 31  SAATPNKKQKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYRGLDIGSAKPSLSD 210
           S      K+KVIVISGPTGAGKSRLALELAKRLNGEI+SADSVQVYRGLD+GSAKPSL D
Sbjct: 40  SGTKKKNKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLMD 99

Query: 211 RKEVTHHLIDILHPSEDYSVGQFYEEARQATKDILKSGRVPIVTGGTGMYLRWFIYGKPD 390
           RKEV HHL+DILHPSEDYSVGQF+E+AR+ T+DIL S RVPIV GGTG+YLRWFIYGKPD
Sbjct: 100 RKEVPHHLVDILHPSEDYSVGQFFEDAREKTRDILNSERVPIVAGGTGLYLRWFIYGKPD 159

Query: 391 VPKASPEIVAEVQAEISELERDGDWDAAVQLVVKAGDPSARSLAANDWYRIRRRLEIIKS 570
           VPKAS EI +EV +E+ +L+R+GDWDAAVQLVVKAGD  A+SLAANDWYR+RR LEIIKS
Sbjct: 160 VPKASREIASEVYSELMDLQRNGDWDAAVQLVVKAGDSKAQSLAANDWYRLRRSLEIIKS 219

Query: 571 SGLPPSAFQVPYDSFREQPKXXXXXXXXXXXXXXXXXXXXXXLDLDYDFSCFFLSTPRMD 750
           SG PPSAF VPYDSFREQP                        +LD++F CFFLS+ R++
Sbjct: 220 SGSPPSAFHVPYDSFREQPSSVDHSHDVNSSSDGSKENKSK--ELDFEFICFFLSSQRLE 277

Query: 751 LYRSIDWRCENMISGSDGILSEAKWLLNMGLMPNSNSATRAIGYRQAMEYLLQCKENGG- 927
           LYRSID RCE+M+ GSDGILSEA+WLL+ GL+PNSNSATRAIGYRQAMEYL+ C+E GG 
Sbjct: 278 LYRSIDLRCEDMLLGSDGILSEARWLLDNGLLPNSNSATRAIGYRQAMEYLVTCREQGGR 337

Query: 928 SSTGDFFAFLSGFQKASR 981
           SS  +F+AFLS FQKASR
Sbjct: 338 SSPQEFYAFLSEFQKASR 355


>ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max]
          Length = 448

 Score =  446 bits (1147), Expect = e-123
 Identities = 227/327 (69%), Positives = 263/327 (80%), Gaps = 3/327 (0%)
 Frame = +1

Query: 10   CCGRRQFSAATPNKKQKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYRGLDIGS 189
            C  R   +A+   KK+KVIVISGPTG+GKSRLALELAKRLNGEIVSADSVQVYRGLD+GS
Sbjct: 30   CRQRFLVTASETKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGS 89

Query: 190  AKPSLSDRKEVTHHLIDILHPSEDYSVGQFYEEARQATKDILKSGRVPIVTGGTGMYLRW 369
            AKPS ++RKEV HHL+DILHPSEDYSVGQF+E+ARQAT  IL +GRVPIV GGTG+YLRW
Sbjct: 90   AKPSPNERKEVPHHLVDILHPSEDYSVGQFFEDARQATGCILDNGRVPIVVGGTGLYLRW 149

Query: 370  FIYGKPDVPKASPEIVAEVQAEISELERDGDWDAAVQLVVKAGDPSARSLAANDWYRIRR 549
            FIYGKPDVPKASPEIV+E   E++EL+R+ DWD AVQLVVKAGDP A+ LA NDWYR+RR
Sbjct: 150  FIYGKPDVPKASPEIVSEAYQELAELQRNDDWDTAVQLVVKAGDPKAQFLAVNDWYRLRR 209

Query: 550  RLEIIKSSGLPPSAFQVPYDSFREQPK--XXXXXXXXXXXXXXXXXXXXXXLDLDYDFSC 723
             LEIIKSSG PPSAF+VPYDSFREQ +                         +LDY+F C
Sbjct: 210  SLEIIKSSGSPPSAFRVPYDSFREQGEYGVADGSELSDMNTYGDAMEKTNSSELDYEFMC 269

Query: 724  FFLSTPRMDLYRSIDWRCENMISGSDGILSEAKWLLNMGLMPNSNSATRAIGYRQAMEYL 903
            FFLS+ R+DLY+SID+RCE+M+ G DGILSEA+WLL+ GL PNSNSAT+AIGYRQAMEYL
Sbjct: 270  FFLSSHRLDLYKSIDYRCEDMLLGRDGILSEAQWLLDTGLHPNSNSATKAIGYRQAMEYL 329

Query: 904  LQCKENGG-SSTGDFFAFLSGFQKASR 981
             +C+E GG SS  +F+ FL  FQKASR
Sbjct: 330  QRCREQGGHSSVEEFYKFLFEFQKASR 356


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