BLASTX nr result

ID: Bupleurum21_contig00014909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014909
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   426   e-117
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela...   358   1e-96
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela...   358   1e-96
gb|ELR20582.1| zinc knuckle domain containing protein [Acanthamo...   281   3e-73

>ref|XP_002303396.1| predicted protein [Populus trichocarpa] gi|222840828|gb|EEE78375.1|
            predicted protein [Populus trichocarpa]
          Length = 493

 Score =  450 bits (1158), Expect = e-124
 Identities = 237/408 (58%), Positives = 291/408 (71%), Gaps = 4/408 (0%)
 Frame = -3

Query: 1348 ISGSAGTGKTVLLEQIIKQLKKIHGRSHVFVTGSTGVAACAIRGQTLHSFAGVGLGEGDC 1169
            I+GSAGTGKTVLL+ II  LK +HG+S VFVT STG+AACA++GQTLHSFA +G+   D 
Sbjct: 74   ITGSAGTGKTVLLKHIIDILKDVHGKSKVFVTASTGIAACALQGQTLHSFASIGIQNADS 133

Query: 1168 ESVVNNVLDNRDAYRRWDKVRALVIDEISMIDAKFFDMLEYVARRFGDMVKTWGRIQLVV 989
             ++++ V  N+ A +RW K +ALVIDEISMI A  F+ LEY+AR        WG IQL+V
Sbjct: 134  GTLLDKVKMNKHACKRWKKAKALVIDEISMISADLFESLEYIARDIRGSEVVWGGIQLIV 193

Query: 988  SGDFFQLPPVSSMCLDIEGGYAFEAECWDRSFDVQFELTTVFRQSDAQLVKLLQGIRRGE 809
             GDFFQLPPV          +AFEA+CW+ SFD+Q ELT VFRQSD +L+K+LQGIR+GE
Sbjct: 194  CGDFFQLPPVIKQQKLSGKEFAFEADCWNASFDLQVELTQVFRQSDPRLIKMLQGIRKGE 253

Query: 808  IDSDDLQLLEKCSVGTEPDSSVARFYPRKDDVCKVNNSRLESLSEQIYVFRALDEGVDKW 629
             D++DLQLLE+     + DS V   YPR +DV KVN  R++SL E    + A D G++  
Sbjct: 254  TDAEDLQLLEESCSMNKQDSLVVWLYPRINDVEKVNEERMKSLGESTVTYAAADSGLEHR 313

Query: 628  KKQLKHVIAPDELEICVGARVMLNKNIDPRRKLVNGATGTVVGF----KKNVPSSQCICK 461
            KKQL   I PD+L +CVGARVML  N++  R L NGATGTV GF     KN   S     
Sbjct: 314  KKQLNQGIVPDQLVLCVGARVMLIMNLNIERNLCNGATGTVTGFVPVEDKNARKSDI--- 370

Query: 460  CHILPIVKFDSVPDEWIIEPEEWVVMNGEVIVARRKQIPLMLAWALSIHKCQGMTLDRIY 281
              + P VKFD  P E +IEP+++ +  G+++VA R QIPL+LAWA+SIHKCQGMTLD   
Sbjct: 371  --LFPQVKFDRGP-EILIEPQKFEIFEGDIVVAWRYQIPLILAWAISIHKCQGMTLDHAQ 427

Query: 280  TDLSRAFGYGMVYVALSRVRSLNGLHISGFIPSKIKAHPKVLQYYKRF 137
            TDLSRAFGYGMVYVALSRVRSL GLH+SGF PSKIKAHPKVL +YK F
Sbjct: 428  TDLSRAFGYGMVYVALSRVRSLEGLHLSGFTPSKIKAHPKVLLFYKSF 475


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
            gi|223540444|gb|EEF42013.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 512

 Score =  426 bits (1096), Expect = e-117
 Identities = 223/408 (54%), Positives = 287/408 (70%)
 Frame = -3

Query: 1348 ISGSAGTGKTVLLEQIIKQLKKIHGRSHVFVTGSTGVAACAIRGQTLHSFAGVGLGEGDC 1169
            I+GSAGTGKTVLL  II  LK+ HG S V VT STG AACAI+GQTLHSFAG G+G+GD 
Sbjct: 59   ITGSAGTGKTVLLGHIISILKRAHGSSGVVVTASTGSAACAIKGQTLHSFAGFGIGDGDP 118

Query: 1168 ESVVNNVLDNRDAYRRWDKVRALVIDEISMIDAKFFDMLEYVARRFGDMVKTWGRIQLVV 989
            ++++  V+ N  A +RW++V+ LV+DEISMI    FD LE++AR+       WG IQL+V
Sbjct: 119  KALLERVVRNSRACKRWNQVKVLVVDEISMIGGNTFDTLEFIARQIRGSNNVWGGIQLIV 178

Query: 988  SGDFFQLPPVSSMCLDIEGGYAFEAECWDRSFDVQFELTTVFRQSDAQLVKLLQGIRRGE 809
            SGDFFQLP V          +AFEA+CW+RSF  Q E+T VFRQ+D QL+ LLQGIR+G 
Sbjct: 179  SGDFFQLPLVLKKSNPSGKEFAFEADCWNRSFHAQVEITKVFRQTDPQLINLLQGIRKGV 238

Query: 808  IDSDDLQLLEKCSVGTEPDSSVARFYPRKDDVCKVNNSRLESLSEQIYVFRALDEGVDKW 629
            ID++DL+LLE+C    EPD S  R YPR +DV KVN  RL+SL E+I  ++A+D G    
Sbjct: 239  IDTEDLKLLEQCCSNNEPDPSAVRLYPRIEDVNKVNEKRLKSLGEKIVAYKAVDGGTR-- 296

Query: 628  KKQLKHVIAPDELEICVGARVMLNKNIDPRRKLVNGATGTVVGFKKNVPSSQCICKCHIL 449
            K+ LK  +A D+LEIC GARVML KN+    KL NGATGTV+GF +       +   ++L
Sbjct: 297  KELLKQGMAQDQLEICKGARVMLIKNLHVWSKLCNGATGTVIGFVEPYDDVIDLFPDNLL 356

Query: 448  PIVKFDSVPDEWIIEPEEWVVMNGEVIVARRKQIPLMLAWALSIHKCQGMTLDRIYTDLS 269
            P++KFDS     +I+P++W    G+  VA R Q+PL LA+ALSIHKCQGMT+D +YTDLS
Sbjct: 357  PVIKFDS-GKVTVIKPQKWECYEGDDFVAWRSQLPLRLAYALSIHKCQGMTIDCLYTDLS 415

Query: 268  RAFGYGMVYVALSRVRSLNGLHISGFIPSKIKAHPKVLQYYKRFRKDQ 125
            R+F YGMVY  LSR R++ G+ +SGF PS IKA+PKVL +Y +    Q
Sbjct: 416  RSFIYGMVYAVLSRGRTMKGIQLSGFEPSMIKANPKVLHFYDQLSSKQ 463


>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
            gi|300156832|gb|EFJ23459.1| hypothetical protein
            SELMODRAFT_451567 [Selaginella moellendorffii]
          Length = 580

 Score =  358 bits (920), Expect = 1e-96
 Identities = 200/409 (48%), Positives = 263/409 (64%), Gaps = 4/409 (0%)
 Frame = -3

Query: 1348 ISGSAGTGKTVLLEQIIKQLKKIHGRSHVFVTGSTGVAACAIRGQTLHSFAGVGLGEGDC 1169
            ++GSAGTGK+ +LE+ I+ L+ ++  S V+VT STG+AACAI G T H+FAGVG+G    
Sbjct: 175  VTGSAGTGKSYILERAIQVLRTVYHPSAVYVTASTGIAACAIGGTTFHAFAGVGIGLSKK 234

Query: 1168 ESVVNNVLDNRDAYRRWDKVRALVIDEISMIDAKFFDMLEYVARRFGDMVKTWGRIQLVV 989
            E +V+ V+ +++  +RW    ALVIDEISMIDA+ FD +++V R      + +G +QL+V
Sbjct: 235  EQLVDMVMRSKEKKQRWLNAAALVIDEISMIDAELFDKVDFVGRAVRRSKERFGGLQLIV 294

Query: 988  SGDFFQLPPVSSMCLDIEGGYAFEAECWDRSFDVQFELTTVFRQSDAQLVKLLQGIRRGE 809
            +GDFFQLPPV          + F A+CW   FD+Q ELT VFRQSD + V +L  IRRGE
Sbjct: 295  TGDFFQLPPVQKP--GETKSFVFSAKCWKECFDLQMELTQVFRQSDREFVGMLNEIRRGE 352

Query: 808  IDSDDLQLLEKC-SVGTEPDSSVARFYPRKDDVCKVNNSRLESL--SEQIYVFRALDEGV 638
                    L+ C S+ T P     R YPR+ DV + N  +L SL  S +   F A D G 
Sbjct: 353  CSFATETRLKSCTSISTAPGIEPTRLYPRRADVDRENEQKLRSLNPSSKSVTFSAKDSGR 412

Query: 637  DKWKKQLKHVIAPDELEICVGARVMLNKNIDPRRKLVNGATGTVVGFKKNVPSSQCICKC 458
             +    L    A  E+ + +GA+VML KN+   + LVNGA G VVGF     S   I   
Sbjct: 413  TQ---MLNGSRAEAEITLAIGAQVMLIKNLGTEQGLVNGARGIVVGFTAPEKSELRISPG 469

Query: 457  HILPIVKFD-SVPDEWIIEPEEWVVMNGEVIVARRKQIPLMLAWALSIHKCQGMTLDRIY 281
              LP+V+F+ S   EWII PE W VM GEV VA+R Q+PL+LAWALS+HKCQGMTLD + 
Sbjct: 470  GGLPVVRFNHSGSSEWIIRPEAWSVMEGEVEVAKRLQLPLILAWALSVHKCQGMTLDCVE 529

Query: 280  TDLSRAFGYGMVYVALSRVRSLNGLHISGFIPSKIKAHPKVLQYYKRFR 134
            TDLSR F YGMVYVALSRVRSL+GL + GF P KI+ HP+V+ +Y + +
Sbjct: 530  TDLSRTFEYGMVYVALSRVRSLHGLRLLGFDPLKIRVHPEVVTFYDQLK 578


>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
            gi|300144841|gb|EFJ11522.1| hypothetical protein
            SELMODRAFT_451566 [Selaginella moellendorffii]
          Length = 580

 Score =  358 bits (920), Expect = 1e-96
 Identities = 200/409 (48%), Positives = 263/409 (64%), Gaps = 4/409 (0%)
 Frame = -3

Query: 1348 ISGSAGTGKTVLLEQIIKQLKKIHGRSHVFVTGSTGVAACAIRGQTLHSFAGVGLGEGDC 1169
            ++GSAGTGK+ +LE+ I+ L+ ++  S V+VT STG+AACAI G T H+FAGVG+G    
Sbjct: 175  VTGSAGTGKSYILERAIQVLRTVYHPSAVYVTASTGIAACAIGGTTFHAFAGVGIGLSKK 234

Query: 1168 ESVVNNVLDNRDAYRRWDKVRALVIDEISMIDAKFFDMLEYVARRFGDMVKTWGRIQLVV 989
            E +V+ V+ +++  +RW    ALVIDEISMIDA+ FD +++V R      + +G +QL+V
Sbjct: 235  EQLVDMVMRSKEKKQRWLNAAALVIDEISMIDAELFDKVDFVGRAVRRSKERFGGLQLIV 294

Query: 988  SGDFFQLPPVSSMCLDIEGGYAFEAECWDRSFDVQFELTTVFRQSDAQLVKLLQGIRRGE 809
            +GDFFQLPPV          + F A+CW   FD+Q ELT VFRQSD + V +L  IRRGE
Sbjct: 295  TGDFFQLPPVQKP--GETKSFVFNAKCWKECFDLQMELTQVFRQSDREFVGMLNEIRRGE 352

Query: 808  IDSDDLQLLEKC-SVGTEPDSSVARFYPRKDDVCKVNNSRLESL--SEQIYVFRALDEGV 638
                    L+ C S+ T P     R YPR+ DV + N  +L SL  S +   F A D G 
Sbjct: 353  CSFATETRLKSCTSISTAPGIEPTRLYPRRADVDRENEQKLRSLNPSSKSVTFSAKDSGR 412

Query: 637  DKWKKQLKHVIAPDELEICVGARVMLNKNIDPRRKLVNGATGTVVGFKKNVPSSQCICKC 458
             +    L    A  E+ + +GA+VML KN+   + LVNGA G VVGF     S   I   
Sbjct: 413  TQ---MLNGSRAEAEITLAIGAQVMLIKNLGTEQGLVNGARGIVVGFTAPEKSELRISPG 469

Query: 457  HILPIVKFD-SVPDEWIIEPEEWVVMNGEVIVARRKQIPLMLAWALSIHKCQGMTLDRIY 281
              LP+V+F+ S   EWII PE W VM GEV VA+R Q+PL+LAWALS+HKCQGMTLD + 
Sbjct: 470  GGLPVVRFNHSGSSEWIIRPEAWSVMEGEVEVAKRLQLPLILAWALSVHKCQGMTLDCVE 529

Query: 280  TDLSRAFGYGMVYVALSRVRSLNGLHISGFIPSKIKAHPKVLQYYKRFR 134
            TDLSR F YGMVYVALSRVRSL+GL + GF P KI+ HP+V+ +Y + +
Sbjct: 530  TDLSRTFEYGMVYVALSRVRSLHGLRLLGFDPLKIRVHPEVVTFYDQLK 578


>gb|ELR20582.1| zinc knuckle domain containing protein [Acanthamoeba castellanii str.
            Neff]
          Length = 668

 Score =  281 bits (719), Expect = 3e-73
 Identities = 173/423 (40%), Positives = 238/423 (56%), Gaps = 14/423 (3%)
 Frame = -3

Query: 1345 SGSAGTGKTVLLEQIIKQLKKIHGRSHVFVTGSTGVAACAIRGQTLHSFAGVGLGEGDCE 1166
            +GSAGTGK++LL ++++ L++IHG   V VT STG+AAC I G TLHS+AGVGLGE   E
Sbjct: 250  TGSAGTGKSLLLREMVRLLREIHGDDAVHVTASTGLAACNIGGCTLHSYAGVGLGEQSQE 309

Query: 1165 SVVNNVLDNRDAYRRWDKVRALVIDEISMIDAKFFDMLEYVARRFGDMVKTWGRIQLVVS 986
             +V  VL  + +  RW   + L+IDE+SM++   FD LEYVAR+  +    +G IQL++S
Sbjct: 310  VLVTKVLSTKRSRDRWVSTKVLIIDEVSMLEGTLFDKLEYVARKVRNYDAPFGGIQLILS 369

Query: 985  GDFFQLPPVSSMCLDIEGGYAFEAECWDRSFDVQFELTTVFRQSDAQLVKLLQGIRRGEI 806
            GDF Q              + FE+  W +       LT VFRQSD   V LL  +R G++
Sbjct: 370  GDFLQTK-----------FFCFESAAWKKVVREVIVLTHVFRQSDNAFVALLNDLRVGKV 418

Query: 805  DSDDLQLLEKCSVGTEPDS-SVAR---------FYPRKDDVCKVNNSRLESLSEQIYVFR 656
              +   +L +C +     + S+ R          YP + DV   N  RL  L+    V+R
Sbjct: 419  TEEGRSMLARCMIPYHDRARSIHRGDDRIQATLLYPHRRDVDGENTKRLAELAGTSRVYR 478

Query: 655  ALDEGVDKWKKQL-KHVIAPDELEICVGARVMLNKNIDPRRKLVNGATGTVVGFKKNVP- 482
            A+D GV+ ++  L ++  APD LE+ + A+V+L KN+D   +LVNGA G VV FKK V  
Sbjct: 479  AVDSGVEPYRSMLARNCSAPDVLELKLNAQVILLKNLDSALELVNGARGVVVDFKKPVKQ 538

Query: 481  --SSQCICKCHILPIVKFDSVPDEWIIEPEEWVVMNGEVIVARRKQIPLMLAWALSIHKC 308
                +   +    P V F S     +I PEEW +       A R Q PL LAWALSIHK 
Sbjct: 539  DNKEESYDESKEYPEVLFTSGVRR-LITPEEWNIGVAGEPQAWRVQCPLALAWALSIHKA 597

Query: 307  QGMTLDRIYTDLSRAFGYGMVYVALSRVRSLNGLHISGFIPSKIKAHPKVLQYYKRFRKD 128
            QGM++ ++  DL + + YG  YVALSR  SL+GL+I       I AHPKVLQ+Y      
Sbjct: 598  QGMSISKVQMDLGKVWEYGQGYVALSRATSLDGLYIMDLNEKGITAHPKVLQFYADMEAQ 657

Query: 127  QDE 119
            Q +
Sbjct: 658  QQQ 660


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