BLASTX nr result

ID: Bupleurum21_contig00014904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014904
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457883.1| hypothetical protein SORBIDRAFT_03g018290 [S...   141   5e-32
ref|NP_001132752.1| uncharacterized protein LOC100194239 [Zea ma...   140   8e-32
ref|NP_001060420.1| Os07g0640100 [Oryza sativa Japonica Group] g...   140   1e-31
ref|XP_004142382.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   136   2e-30
gb|ACJ85983.1| unknown [Medicago truncatula]                          133   1e-29

>ref|XP_002457883.1| hypothetical protein SORBIDRAFT_03g018290 [Sorghum bicolor]
           gi|241929858|gb|EES03003.1| hypothetical protein
           SORBIDRAFT_03g018290 [Sorghum bicolor]
          Length = 132

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/87 (80%), Positives = 76/87 (87%)
 Frame = -2

Query: 261 MAFTMRAVKVPPNSVSLEEARTRTFEFFKSACRSIPTVMEIYNLYDVVTPSQLRSNIAAQ 82
           MAFTMRAVKVPPNS SLEEAR R F+FFK ACRSIPTVMEIYNL DVVTPSQLRS IA +
Sbjct: 1   MAFTMRAVKVPPNSASLEEARHRVFDFFKQACRSIPTVMEIYNLDDVVTPSQLRSTIAKE 60

Query: 81  IRKNSHITNPKVVDMLLFKAMEELGDI 1
           IRKN ++TNPKV+DMLLF  MEEL +I
Sbjct: 61  IRKNQNVTNPKVIDMLLFNGMEELNNI 87


>ref|NP_001132752.1| uncharacterized protein LOC100194239 [Zea mays]
           gi|194695306|gb|ACF81737.1| unknown [Zea mays]
           gi|195620218|gb|ACG31939.1| NADH ubiquinone
           oxidoreductase B14 subunit [Zea mays]
           gi|195620906|gb|ACG32283.1| NADH ubiquinone
           oxidoreductase B14 subunit [Zea mays]
           gi|414864417|tpg|DAA42974.1| TPA: NADH ubiquinone
           oxidoreductase B14 subunit [Zea mays]
          Length = 132

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/87 (80%), Positives = 76/87 (87%)
 Frame = -2

Query: 261 MAFTMRAVKVPPNSVSLEEARTRTFEFFKSACRSIPTVMEIYNLYDVVTPSQLRSNIAAQ 82
           MAFTMRAVKVPPNS SLEEAR R F+FFK ACRSIPTVMEIYNL DVVTPSQLRS IA +
Sbjct: 1   MAFTMRAVKVPPNSASLEEARHRVFDFFKQACRSIPTVMEIYNLDDVVTPSQLRSTIAKE 60

Query: 81  IRKNSHITNPKVVDMLLFKAMEELGDI 1
           IRKN ++TNPKV+DMLLF A EEL +I
Sbjct: 61  IRKNQNVTNPKVIDMLLFNATEELNNI 87


>ref|NP_001060420.1| Os07g0640100 [Oryza sativa Japonica Group]
           gi|23237891|dbj|BAC16465.1| unknown protein [Oryza
           sativa Japonica Group] gi|50510168|dbj|BAD31263.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113611956|dbj|BAF22334.1| Os07g0640100 [Oryza sativa
           Japonica Group] gi|125559332|gb|EAZ04868.1| hypothetical
           protein OsI_27047 [Oryza sativa Indica Group]
           gi|125601253|gb|EAZ40829.1| hypothetical protein
           OsJ_25305 [Oryza sativa Japonica Group]
           gi|215678543|dbj|BAG92198.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765241|dbj|BAG86938.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 131

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/87 (78%), Positives = 77/87 (88%)
 Frame = -2

Query: 261 MAFTMRAVKVPPNSVSLEEARTRTFEFFKSACRSIPTVMEIYNLYDVVTPSQLRSNIAAQ 82
           MAFTMRAVKVPPNS SLEEAR R F+FF+ ACR+IP++MEIYNL DVVTPSQLRS IA +
Sbjct: 1   MAFTMRAVKVPPNSASLEEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPSQLRSTIAKE 60

Query: 81  IRKNSHITNPKVVDMLLFKAMEELGDI 1
           IRKN  +TNPKV+DMLLFK MEELG+I
Sbjct: 61  IRKNQGVTNPKVIDMLLFKGMEELGNI 87


>ref|XP_004142382.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 6-like isoform 1 [Cucumis sativus]
          Length = 132

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/87 (73%), Positives = 78/87 (89%)
 Frame = -2

Query: 261 MAFTMRAVKVPPNSVSLEEARTRTFEFFKSACRSIPTVMEIYNLYDVVTPSQLRSNIAAQ 82
           MAFT+R +KVPPNS SLEEAR+R F+FF+SACRS+P +M+IYNL DV T SQLRS IA++
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 81  IRKNSHITNPKVVDMLLFKAMEELGDI 1
           IRKNSH+T+PKV+DMLLFK MEELG+I
Sbjct: 61  IRKNSHVTDPKVIDMLLFKGMEELGNI 87


>gb|ACJ85983.1| unknown [Medicago truncatula]
          Length = 133

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/87 (73%), Positives = 74/87 (85%)
 Frame = -2

Query: 261 MAFTMRAVKVPPNSVSLEEARTRTFEFFKSACRSIPTVMEIYNLYDVVTPSQLRSNIAAQ 82
           MA  +R  KVPPNSV+L EAR R FEFF+SACRS+PTVME+YNLYDV T SQLRS IAA+
Sbjct: 1   MAQAIRNAKVPPNSVNLSEARQRVFEFFRSACRSLPTVMEVYNLYDVATVSQLRSTIAAE 60

Query: 81  IRKNSHITNPKVVDMLLFKAMEELGDI 1
           IRKN HITNPKV+DMLLFK +EEL ++
Sbjct: 61  IRKNDHITNPKVIDMLLFKGLEELKNV 87


Top