BLASTX nr result

ID: Bupleurum21_contig00014901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014901
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15119.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256...    84   2e-14
emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]    83   2e-14
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]       79   4e-13
ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [...    79   5e-13

>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  MTFFNKAASILRQTLNTKHASIQGSVCNPSIFQMIR-FASTRVFVGGLSYDTDDISLREA 207
           M FF K  +ILRQT++ K  + Q SV NPSI+Q IR  +S+++F+GGLSY TDD SLREA
Sbjct: 1   MAFFGKVGNILRQTVS-KQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREA 59

Query: 208 FQNYGQVIDAKIIKD 252
           F  YG+VI+A++I D
Sbjct: 60  FHKYGEVIEARVIVD 74


>ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
          Length = 277

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  MTFFNKAASILRQTLNTKHASIQGSVCNPSIFQMIR-FASTRVFVGGLSYDTDDISLREA 207
           M FF K  +ILRQT++ K  + Q SV NPSI+Q IR  +S+++F+GGLSY TDD SLREA
Sbjct: 1   MAFFGKVGNILRQTVS-KQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREA 59

Query: 208 FQNYGQVIDAKIIKD 252
           F  YG+VI+A++I D
Sbjct: 60  FHKYGEVIEARVIVD 74


>emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
          Length = 272

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  MTFFNKAASILRQTLNTKHASIQGSVCNPSIFQMIR-FASTRVFVGGLSYDTDDISLREA 207
           M FF K  +ILRQT++ K  + Q SV NPSI+Q IR  +S+++F+GGLSY TDD SLREA
Sbjct: 1   MAFFGKVGNILRQTVS-KQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREA 59

Query: 208 FQNYGQVIDAKIIKD 252
           F  YG+VI+A++I D
Sbjct: 60  FYKYGEVIEARVIVD 74


>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
          Length = 277

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/75 (52%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  MTFFNKAASILRQTLNTKHASIQGSVCNPSIFQMIR-FASTRVFVGGLSYDTDDISLREA 207
           M FFN+  SIL+Q+++ KH++++ S  N S+FQ IR  +S+++FVGGLSY TD+ SL+EA
Sbjct: 1   MAFFNRVGSILKQSVS-KHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEA 59

Query: 208 FQNYGQVIDAKIIKD 252
           F  YG VI+A++I D
Sbjct: 60  FSQYGDVIEARVIMD 74


>ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 267

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  MTFFNKAASILRQTLNTKHASIQGSVCNPSIFQMIRF-ASTRVFVGGLSYDTDDISLREA 207
           M F +K  ++LRQT  TK  S + S   PS+FQ IRF +S++VFVGG+SY TDD SLREA
Sbjct: 1   MAFLSKVGNLLRQTA-TKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREA 59

Query: 208 FQNYGQVIDAKIIKD 252
           F  YG+VI+A++I D
Sbjct: 60  FGKYGEVIEARVIID 74


Top