BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014896
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   272   1e-70
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   253   8e-65
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   248   1e-63
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   243   5e-62
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   243   8e-62

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  272 bits (696), Expect = 1e-70
 Identities = 132/232 (56%), Positives = 147/232 (63%)
 Frame = -2

Query: 916 MSRGFGEXXXXXXXXXXXXXXXXXNVDAGNFECNICFELAQDPIVTLCGHLFCWPCLYKW 737
           M+ GFGE                 N DAGNFECNICF+LAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1   MTSGFGESTSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 60

Query: 736 LHVHSLSQECPVCKALVEEHKLVPLYGRGKNSADPRSKTVPGVEIPQRPAGQRPETAPPP 557
           LH+HS SQECPVCKALVEE KLVPLYGRGK S DPRSK++PG+ IP RP GQRPETAPPP
Sbjct: 61  LHIHSHSQECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPP 120

Query: 556 DTNHXXXXXXXXXXXXXXXXXXATXXXXXXXXXXXXXGLIPSLFNINVHGFPGANMYGGA 377
           D NH                  AT             GL PSLFN+ VHGFP A MYG A
Sbjct: 121 DANHFMQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPA 180

Query: 376 PSFPYAYSSPFHGGHAHGFPPRRVSQEEQADFSLKLICXXXXXXXXXXXLWS 221
             FPY +S+ FHGGHAHGFP    +Q +QAD+ LK++            +WS
Sbjct: 181 AGFPYGFSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVIIALIWS 232


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  253 bits (645), Expect = 8e-65
 Identities = 121/189 (64%), Positives = 133/189 (70%)
 Frame = -2

Query: 838 DAGNFECNICFELAQDPIVTLCGHLFCWPCLYKWLHVHSLSQECPVCKALVEEHKLVPLY 659
           DAGNFECNICF+LAQDPIVTLCGHLFCWPCLYKWLH HS S+ECPVCKALVEE KLVPLY
Sbjct: 26  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSQSKECPVCKALVEEEKLVPLY 85

Query: 658 GRGKNSADPRSKTVPGVEIPQRPAGQRPETAPPPDTNHXXXXXXXXXXXXXXXXXXATXX 479
           GRGK S DPRSK++PGV IP RPAGQRPETAPPP+ NH                  AT  
Sbjct: 86  GRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQHGFGFMGGLGGFAPMATAR 145

Query: 478 XXXXXXXXXXXGLIPSLFNINVHGFPGANMYGGAPSFPYAYSSPFHGGHAHGFPPRRVSQ 299
                      GLIPSLFN+ VHGFP A MYG A  FPY +S+ FHGGHAHG+   +   
Sbjct: 146 FGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGFPYGFSNSFHGGHAHGY--HQHQG 203

Query: 298 EEQADFSLK 272
           + Q D+ LK
Sbjct: 204 QGQQDYYLK 212


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  248 bits (634), Expect = 1e-63
 Identities = 117/189 (61%), Positives = 132/189 (69%)
 Frame = -2

Query: 838 DAGNFECNICFELAQDPIVTLCGHLFCWPCLYKWLHVHSLSQECPVCKALVEEHKLVPLY 659
           DAGNFECNICF+LAQDPI+TLCGHLFCWPCLYKWLH HS S+ECPVCKALVEE KLVPLY
Sbjct: 25  DAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKALVEEEKLVPLY 84

Query: 658 GRGKNSADPRSKTVPGVEIPQRPAGQRPETAPPPDTNHXXXXXXXXXXXXXXXXXXATXX 479
           GRGK S+DPRS+++PGV IP RPAGQRPETAPPP+ N                   AT  
Sbjct: 85  GRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPPEPNPFAHHGFGFTGGLGGFAPAATAR 144

Query: 478 XXXXXXXXXXXGLIPSLFNINVHGFPGANMYGGAPSFPYAYSSPFHGGHAHGFPPRRVSQ 299
                      G IPSLFN  +HGF GA MYGGAP FPY +S+ FHGGH H +P    + 
Sbjct: 145 FGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGAPGFPYGFSNSFHGGHVHRYPLH--TG 202

Query: 298 EEQADFSLK 272
           + Q D+ LK
Sbjct: 203 QGQQDYYLK 211


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
           gi|356519064|ref|XP_003528194.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  243 bits (621), Expect = 5e-62
 Identities = 117/191 (61%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
 Frame = -2

Query: 838 DAGNFECNICFELAQDPIVTLCGHLFCWPCLYKWLHVHSLSQECPVCKALVEEHKLVPLY 659
           DA NFECNICFELAQDPI+TLCGHLFCWPCLYKWLH HS S+ECPVCKALVEE KLVPLY
Sbjct: 26  DAANFECNICFELAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKALVEEEKLVPLY 85

Query: 658 GRGKNSADPRSKTVPGVEIPQRPAGQRPETAPPPDTNHXXXXXXXXXXXXXXXXXXA--T 485
           GRGK+S DPRSK++PGV IP RPAGQRPETAPPP+TNH                     T
Sbjct: 86  GRGKSSTDPRSKSIPGVNIPHRPAGQRPETAPPPETNHFHQHGFGFMGGLGGFVPPPMAT 145

Query: 484 XXXXXXXXXXXXXGLIPSLFNINVHGFPGANMYGGAPSFPYAYSSPFHGGHAHGFPPRRV 305
                        G IPSLFN  +HGF  A MYGG   FP+ +++ FHG HAHGFP R  
Sbjct: 146 TRFGNFALSAAFGGFIPSLFNFQMHGFHDAAMYGGGAGFPHGFANTFHGVHAHGFPLR-- 203

Query: 304 SQEEQADFSLK 272
           + + Q D+ LK
Sbjct: 204 THQGQQDYYLK 214


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  243 bits (619), Expect = 8e-62
 Identities = 120/189 (63%), Positives = 133/189 (70%)
 Frame = -2

Query: 838 DAGNFECNICFELAQDPIVTLCGHLFCWPCLYKWLHVHSLSQECPVCKALVEEHKLVPLY 659
           DAGNFECNICF+LAQDPIVTLCGHLFCWPCLYKWLH HS S+ECPVCKALVEE KLVPLY
Sbjct: 26  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSKSRECPVCKALVEEEKLVPLY 85

Query: 658 GRGKNSADPRSKTVPGVEIPQRPAGQRPETAPPPDTNHXXXXXXXXXXXXXXXXXXATXX 479
           GRGK S DPRSK++PGV IP RPAGQRPETAPPP+ NH                  AT  
Sbjct: 86  GRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFGQHGFGFMGGLGGFAPMATAR 145

Query: 478 XXXXXXXXXXXGLIPSLFNINVHGFPGANMYGGAPSFPYAYSSPFHGGHAHGFPPRRVSQ 299
                      GLIPSLFN+ VHGFP A MYG A  +PY ++S FHGGH HG+  R+   
Sbjct: 146 LGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPA-GYPYGFNS-FHGGHPHGY--RQHHG 201

Query: 298 EEQADFSLK 272
           + Q D+ LK
Sbjct: 202 QGQQDYYLK 210