BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014880
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido...   171   6e-41
ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arab...   171   6e-41
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   169   3e-40
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   166   3e-39
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              160   1e-37

>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
           gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic; Flags: Precursor
           gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
           helicase 58 [Arabidopsis thaliana]
          Length = 472

 Score =  171 bits (433), Expect = 6e-41
 Identities = 94/168 (55%), Positives = 116/168 (69%), Gaps = 6/168 (3%)
 Frame = +1

Query: 34  IHVTHLHHFSPILHQ------KPKFSISIQNPSYSISLINDRSINTTHSRFSSRASLVSA 195
           ++V HL  F  I +       KP F  S        S  + R IN      +  +S + +
Sbjct: 6   LNVPHLAFFPKISYASVFSTLKPSFFHSTSTRRALKSSPSSRIINL--QAVAETSSEIES 63

Query: 196 GDLTEHTEEFTLRKLCQGRVPEHVLRRAEDVGFVAPTDVQKQALPILFSGRDCILHSQTG 375
             +TE T   TLR++CQG VPEH+L R E++GFV PTD+Q++ALP LF+GRDCILH+QTG
Sbjct: 64  NSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTG 123

Query: 376 SGKTLAYLLLIFSLVNTQRSSVQALIIVPTRELGMQVTKVARTLAAKS 519
           SGKTL YLLLIFSL+N QRSSVQA+I+VPTRELGMQVTKVAR LAAKS
Sbjct: 124 SGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS 171


>ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arabidopsis lyrata subsp.
           lyrata] gi|297317709|gb|EFH48131.1| hypothetical protein
           ARALYDRAFT_488806 [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score =  171 bits (433), Expect = 6e-41
 Identities = 94/169 (55%), Positives = 120/169 (71%), Gaps = 7/169 (4%)
 Frame = +1

Query: 34  IHVTHLHHFSPILHQKPKFSISIQNPSYSISLINDRSINTT-HSRF------SSRASLVS 192
           ++V HL  F  I    P    S   PS+  S    R++ T+ +SR       +  +S + 
Sbjct: 6   LNVPHLAFFPKISPFNPPL-FSTLKPSFFHSTSTSRALKTSSNSRIINLQAVAETSSEIE 64

Query: 193 AGDLTEHTEEFTLRKLCQGRVPEHVLRRAEDVGFVAPTDVQKQALPILFSGRDCILHSQT 372
           +   T+ T   TLRK+CQG VPEH+L R E++GF++PTD+Q++ALP LF+GRDCILH+QT
Sbjct: 65  SNSATD-TAALTLRKICQGFVPEHILHRMEEIGFISPTDIQREALPTLFTGRDCILHAQT 123

Query: 373 GSGKTLAYLLLIFSLVNTQRSSVQALIIVPTRELGMQVTKVARTLAAKS 519
           GSGKTL YLLLIFSL+N QRSSVQA+I+VPTRELGMQVTKVAR LAAKS
Sbjct: 124 GSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS 172


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/120 (71%), Positives = 101/120 (84%)
 Frame = +1

Query: 178 ASLVSAGDLTEHTEEFTLRKLCQGRVPEHVLRRAEDVGFVAPTDVQKQALPILFSGRDCI 357
           +S+  A D+ E T   TLR++CQG VPEHVLRR E+VGF+ PTDVQ+QALP+L SGRDCI
Sbjct: 63  SSITEASDIGERT--LTLREICQGCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCI 120

Query: 358 LHSQTGSGKTLAYLLLIFSLVNTQRSSVQALIIVPTRELGMQVTKVARTLAAKSGEPGSE 537
           LH+QTGSGKTL YLLLIFS+VNT+ S+VQALI+VPTRELG+QVTKVAR LAAK  EP  E
Sbjct: 121 LHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELE 180


>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Cucumis sativus]
           gi|449531697|ref|XP_004172822.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 58, chloroplastic-like
           [Cucumis sativus]
          Length = 473

 Score =  166 bits (419), Expect = 3e-39
 Identities = 89/147 (60%), Positives = 110/147 (74%)
 Frame = +1

Query: 76  QKPKFSISIQNPSYSISLINDRSINTTHSRFSSRASLVSAGDLTEHTEEFTLRKLCQGRV 255
           Q P F I+   P YS S    R +        S +SL +  +   + E  TLR++C G V
Sbjct: 31  QLPNF-INTNGPIYSTS--KSRPLQA----LLSSSSLKNVAE--SNFEASTLREICNGHV 81

Query: 256 PEHVLRRAEDVGFVAPTDVQKQALPILFSGRDCILHSQTGSGKTLAYLLLIFSLVNTQRS 435
           PEH+LRR E++GFVAPTDVQ+QALP+LFSGRDC+LH+QTGSGKTL YLLLIFS++N ++S
Sbjct: 82  PEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAKKS 141

Query: 436 SVQALIIVPTRELGMQVTKVARTLAAK 516
           +VQALI+VPTRELGMQVTKVAR LAAK
Sbjct: 142 AVQALIVVPTRELGMQVTKVARMLAAK 168


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  160 bits (404), Expect = 1e-37
 Identities = 84/124 (67%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
 Frame = +1

Query: 178 ASLVSAGDLTEHTEEFTLRKLCQGRVPEHVLR----RAEDVGFVAPTDVQKQALPILFSG 345
           +S+  A D+ E T   TLR++CQG VPEHV+     R E+VGF+ PTDVQ+QALP+L SG
Sbjct: 63  SSITEASDIGERT--LTLREICQGCVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSG 120

Query: 346 RDCILHSQTGSGKTLAYLLLIFSLVNTQRSSVQALIIVPTRELGMQVTKVARTLAAKSGE 525
           RDCILH+QTGSGKTL YLLLIFS+VNT+ S+VQALI+VPTRELG+QVTKVAR LAAK  E
Sbjct: 121 RDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPME 180

Query: 526 PGSE 537
           P  E
Sbjct: 181 PELE 184