BLASTX nr result

ID: Bupleurum21_contig00014866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014866
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284872.1| PREDICTED: F-box/kelch-repeat protein At1g80...   417   e-114
ref|XP_002517518.1| conserved hypothetical protein [Ricinus comm...   393   e-107
ref|XP_002299632.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
emb|CAN68948.1| hypothetical protein VITISV_039605 [Vitis vinifera]   380   e-104
ref|XP_002280331.2| PREDICTED: F-box/kelch-repeat protein At1g80...   380   e-103

>ref|XP_002284872.1| PREDICTED: F-box/kelch-repeat protein At1g80440 [Vitis vinifera]
          Length = 355

 Score =  417 bits (1072), Expect = e-114
 Identities = 202/359 (56%), Positives = 259/359 (72%), Gaps = 2/359 (0%)
 Frame = -2

Query: 1088 MDLISGLPNDVGLECLIRLPYDXXXXXXXXXXSWKLEIELPEFWRRRKAAGLTQRLIVMT 909
            MD I GLP+DV  +CLIR+ Y+           WK E+E P+F+R+RK AG T+ +  M 
Sbjct: 1    MDFIPGLPDDVARQCLIRVSYENFSTIAAVCRVWKSEVEDPDFFRQRKTAGYTRPVFAMA 60

Query: 908  QARVDPTRNKGGMKNLVMPAYGLTVCDPDSVSWTELPLLPGHSDGLPLFCQLAAVGLNLV 729
            QARV P R+ GGMK   + AY +T+ D ++ +W+ELP +PG SDGLP+FCQL  V   LV
Sbjct: 61   QARVVPNRSSGGMKCPTL-AYRVTLLDLETGNWSELPPVPGFSDGLPMFCQLVGVESELV 119

Query: 728  VMGGLDPVTWDASNDVFVYNFITATWRRGADMPGCPRSFFACASDS--RMVFVAGGHDCE 555
            V+GG DP TW+ S+ VF+YNF++ATWRRGADMPG  RSFF CA+    R+V+VAGGHD E
Sbjct: 120  VVGGWDPDTWEISSSVFIYNFLSATWRRGADMPGARRSFFGCAASGLERVVYVAGGHDGE 179

Query: 554  KNALKSAMVYDVADDKWVLLPDMAMERDECKGVFHLGRFHVIGGYPTEMQGRFQRSAEAF 375
            KNALKSA+VYDVA D+W  LPDMA ERDECKGVFH G+FHVIGGY TEMQGRF+RSAEAF
Sbjct: 180  KNALKSALVYDVAKDEWAPLPDMARERDECKGVFHRGKFHVIGGYCTEMQGRFERSAEAF 239

Query: 374  NFATWQWDKVYENFLEVATCPRSYVDNGRGNVYKWNSNAKEILMTNDSATWEVIAEMPSE 195
            +FA W+WDK  E+FLE +TCPR+ VD G   +Y    +A E++   DS  W+ + ++P+E
Sbjct: 240  DFANWEWDKAEEDFLESSTCPRTCVDGGDMGMYM--CHAGEVVALQDS-RWQTVDKLPAE 296

Query: 194  VLISTHMTAWQDKMMVIGAQRFGEAHNVYTLDLKKRKWTKLAAPEYFSGHVQSSCLLEI 18
            +  + +MT W+ K++V+G + FG+AH  Y LDLK  +W KL A E F GHVQS C LEI
Sbjct: 297  IRHTAYMTTWEGKLLVMGCRSFGDAHVAYMLDLKSHRWRKLVAAEEFCGHVQSGCCLEI 355


>ref|XP_002517518.1| conserved hypothetical protein [Ricinus communis]
            gi|223543150|gb|EEF44682.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 355

 Score =  393 bits (1010), Expect = e-107
 Identities = 186/358 (51%), Positives = 249/358 (69%), Gaps = 1/358 (0%)
 Frame = -2

Query: 1088 MDLISGLPNDVGLECLIRLPYDXXXXXXXXXXSWKLEIELPEFWRRRKAAGLTQRLIVMT 909
            M+LI GLP+DV  +CL+R+ Y            W+ E+ELPEF++RRK +  +Q+LIVM 
Sbjct: 1    MELIPGLPDDVARDCLVRVMYKQFSTVIAVCKGWRTELELPEFYQRRKDSCNSQKLIVMA 60

Query: 908  QARVDPTRNKGGMKNLVMPAYGLTVCDPDSVSWTELPLLPGHSDGLPLFCQLAAVGLNLV 729
            QARV   +    +K    P Y LTV +PD+  W +LP +PG S GLP+FCQ+ +VG +L+
Sbjct: 61   QARVHQKQGSNLIKYRANPVYSLTVLEPDTGDWCDLPPIPGFSHGLPMFCQVVSVGSDLI 120

Query: 728  VMGGLDPVTWDASNDVFVYNFITATWRRGADMPGCPRSFFACASD-SRMVFVAGGHDCEK 552
            V+GGLDP TW+AS+ VF++NF++ATWRRGADMPG  RSFF CAS+ SR VFV GGHD EK
Sbjct: 121  VLGGLDPTTWEASDSVFIFNFVSATWRRGADMPGVRRSFFGCASNFSRTVFVVGGHDGEK 180

Query: 551  NALKSAMVYDVADDKWVLLPDMAMERDECKGVFHLGRFHVIGGYPTEMQGRFQRSAEAFN 372
            NAL+S   YDVA+D+W+ LPDMA ERDECK VFH G+ HVIGGY TEMQGRF++SAE F+
Sbjct: 181  NALRSGFAYDVANDEWIPLPDMARERDECKAVFHGGKLHVIGGYCTEMQGRFEKSAEVFD 240

Query: 371  FATWQWDKVYENFLEVATCPRSYVDNGRGNVYKWNSNAKEILMTNDSATWEVIAEMPSEV 192
             ATW+W+ V ++FL  A CPR+ V    G    +  +  ++L     ATW+ +A++P+ V
Sbjct: 241  AATWKWNDVQDDFLLAAICPRTCVIGDDG---LYICHGGDVLALKGGATWQAVAKLPANV 297

Query: 191  LISTHMTAWQDKMMVIGAQRFGEAHNVYTLDLKKRKWTKLAAPEYFSGHVQSSCLLEI 18
                +++ W+ K++VIG++  GE H  YTLD    KW KL  P+ +SGHVQS C LEI
Sbjct: 298  CNVAYVSTWRGKLLVIGSEALGEPHIAYTLDSNSYKWAKLETPKQYSGHVQSGCYLEI 355


>ref|XP_002299632.1| predicted protein [Populus trichocarpa] gi|222846890|gb|EEE84437.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  389 bits (999), Expect = e-106
 Identities = 189/358 (52%), Positives = 243/358 (67%), Gaps = 1/358 (0%)
 Frame = -2

Query: 1088 MDLISGLPNDVGLECLIRLPYDXXXXXXXXXXSWKLEIELPEFWRRRKAAGLTQRLIVMT 909
            M+LI GLP D+  +CLIR+ Y           SWK E E PEF R R+A    Q+L+VM 
Sbjct: 1    MELIPGLPYDIARDCLIRVKYKQLATVVSICKSWKSETESPEFRRLRRATCTGQKLVVMA 60

Query: 908  QARVDPTRNKGGMKNLVMPAYGLTVCDPDSVSWTELPLLPGHSDGLPLFCQLAAVGLNLV 729
            QARV+P +    MKN V P Y  T+ +PD+  W ELP +PG S+GLPLFCQ+A+VG +LV
Sbjct: 61   QARVNPNQASNIMKNGVSPVYRFTLLEPDTGDWCELPPIPGFSNGLPLFCQVASVGSDLV 120

Query: 728  VMGGLDPVTWDASNDVFVYNFITATWRRGADMPGCPRSFFACASD-SRMVFVAGGHDCEK 552
            V+GGLDPVTW+ S  VF++NF++ATWRRGADMPG  RSFF  ASD  RMV+V GGHD +K
Sbjct: 121  VLGGLDPVTWEVSVSVFIFNFVSATWRRGADMPGVRRSFFGFASDFDRMVYVVGGHDGDK 180

Query: 551  NALKSAMVYDVADDKWVLLPDMAMERDECKGVFHLGRFHVIGGYPTEMQGRFQRSAEAFN 372
            NAL+S M YD A D+W+ LPDMA ERDECK +F  G  HVIGGY TEMQGRF+R+AE F 
Sbjct: 181  NALRSTMAYDTAKDEWLSLPDMARERDECKAIFRHGNLHVIGGYSTEMQGRFERTAEVFE 240

Query: 371  FATWQWDKVYENFLEVATCPRSYVDNGRGNVYKWNSNAKEILMTNDSATWEVIAEMPSEV 192
             A+WQW  V ++ LE A CP++ V    G +Y         ++    +TW+ +A++P++V
Sbjct: 241  IASWQWKNVLDDLLEDAMCPKTCVCGSDGELYMCRGG---YVVALKGSTWKPVADLPADV 297

Query: 191  LISTHMTAWQDKMMVIGAQRFGEAHNVYTLDLKKRKWTKLAAPEYFSGHVQSSCLLEI 18
                ++TAWQDK++VIG   F E +  Y LDLK  KW K+  P+ +SGHVQS C LEI
Sbjct: 298  SNIANVTAWQDKLVVIGTAGFREPYMAYVLDLKNYKWKKMETPQQYSGHVQSGCYLEI 355


>emb|CAN68948.1| hypothetical protein VITISV_039605 [Vitis vinifera]
          Length = 360

 Score =  380 bits (977), Expect(2) = e-104
 Identities = 186/334 (55%), Positives = 240/334 (71%), Gaps = 2/334 (0%)
 Frame = -2

Query: 1088 MDLISGLPNDVGLECLIRLPYDXXXXXXXXXXSWKLEIELPEFWRRRKAAGLTQRLIVMT 909
            MD I GLP+DV  +CLIR+ Y+           WK E+E P+F+R+RK AG T+ +  M 
Sbjct: 1    MDFIPGLPDDVARQCLIRVSYEXFSTIAAVCRVWKSEVEDPDFFRQRKTAGYTRPVFAMA 60

Query: 908  QARVDPTRNKGGMKNLVMPAYGLTVCDPDSVSWTELPLLPGHSDGLPLFCQLAAVGLNLV 729
            QARV P R+ GGMK   + AY +T+ D ++ +W+ELP +PG SDGLP+FCQL  V   LV
Sbjct: 61   QARVVPNRSSGGMKCPTL-AYRVTLLDLETGNWSELPPVPGFSDGLPMFCQLVGVESELV 119

Query: 728  VMGGLDPVTWDASNDVFVYNFITATWRRGADMPGCPRSFFACASDS--RMVFVAGGHDCE 555
            V+GG DP TW+ S+ VF+YNF++ATWRRGADMPG  RSFF CA+    R+V+VAGGHD E
Sbjct: 120  VVGGWDPDTWEISSSVFIYNFLSATWRRGADMPGARRSFFGCAASGLERVVYVAGGHDGE 179

Query: 554  KNALKSAMVYDVADDKWVLLPDMAMERDECKGVFHLGRFHVIGGYPTEMQGRFQRSAEAF 375
            KNALKSA+VYDVA D+W  LPD A ERDECKGVFH G+FHVIGGY TEMQGRF+ SAEAF
Sbjct: 180  KNALKSALVYDVAKDEWAPLPDXARERDECKGVFHRGKFHVIGGYCTEMQGRFEXSAEAF 239

Query: 374  NFATWQWDKVYENFLEVATCPRSYVDNGRGNVYKWNSNAKEILMTNDSATWEVIAEMPSE 195
            +FA W+WDK  E+FLE +TCPR+ VD G   +Y    +A E++   DS  W+ + ++P+E
Sbjct: 240  DFANWEWDKAEEDFLESSTCPRTCVDGGDMGMYM--CHAGEVVALQDS-RWQTVDKLPAE 296

Query: 194  VLISTHMTAWQDKMMVIGAQRFGEAHNVYTLDLK 93
            +  + +MT W+ K++V G + FG AH  Y LDLK
Sbjct: 297  IRHTAYMTTWZGKLLVXGCRSFGXAHVAYMLDLK 330



 Score = 26.2 bits (56), Expect(2) = e-104
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 96  KEEEVDKIGGTGIFFRPCSV*LSFGNIDRGE 4
           K  +V++IGG G     CSV L FG+++  E
Sbjct: 330 KXSQVEEIGGGGGVLWSCSVRLLFGDLNGPE 360


>ref|XP_002280331.2| PREDICTED: F-box/kelch-repeat protein At1g80440-like [Vitis vinifera]
          Length = 338

 Score =  380 bits (976), Expect = e-103
 Identities = 194/359 (54%), Positives = 244/359 (67%), Gaps = 2/359 (0%)
 Frame = -2

Query: 1088 MDLISGLPNDVGLECLIRLPYDXXXXXXXXXXSWKLEIELPEFWRRRKAAGLTQRLIVMT 909
            MD I GLP+DV  +CLIR+ Y+           WK E+E P+F+R+RK AG T+ +    
Sbjct: 1    MDFIPGLPDDVARQCLIRVYYEKFSTIAAVCRVWKSEVEDPDFFRQRKTAGYTRPVFAKA 60

Query: 908  QARVDPTRNKGGMKNLVMPAYGLTVCDPDSVSWTELPLLPGHSDGLPLFCQLAAVGLNLV 729
            QARV P R+ GGMK   + AY +T+ D ++ +W ELP +PG SDGLP+FCQL  V   LV
Sbjct: 61   QARVVPNRSSGGMKCPTL-AYRVTLLDLETGNWRELPPVPGFSDGLPMFCQLVGVESELV 119

Query: 728  VMGGLDPVTWDASNDVFVYNFITATWRRGADMPGCPRSFFACASDS--RMVFVAGGHDCE 555
            V+GG DP TW+ S+ VF+YNF++ATWRRGADMPG  RSFF CA+    R+V+V      E
Sbjct: 120  VVGGWDPDTWEVSSSVFIYNFLSATWRRGADMPGARRSFFGCAASGLERVVYVG-----E 174

Query: 554  KNALKSAMVYDVADDKWVLLPDMAMERDECKGVFHLGRFHVIGGYPTEMQGRFQRSAEAF 375
            KNALKSA+VYDVA D+W  LPDMA E DECKGVFH G+FHVIGGY TEMQGRF+RSAEAF
Sbjct: 175  KNALKSALVYDVAKDEWAPLPDMARESDECKGVFHRGKFHVIGGYCTEMQGRFERSAEAF 234

Query: 374  NFATWQWDKVYENFLEVATCPRSYVDNGRGNVYKWNSNAKEILMTNDSATWEVIAEMPSE 195
            +FA W+WDK  E+FLE +TCPR+ VD G   +Y    +A E++   D   W+ + ++P+E
Sbjct: 235  DFANWEWDKAEEDFLEDSTCPRTCVDGGDMGMYM--CHAGEVVALQD-CRWQTVDKLPAE 291

Query: 194  VLISTHMTAWQDKMMVIGAQRFGEAHNVYTLDLKKRKWTKLAAPEYFSGHVQSSCLLEI 18
            +             +VIG + FGEAH  Y LDLK R+W KL APE F GHVQS C LEI
Sbjct: 292  I------------PLVIGCRSFGEAHVAYMLDLKSRRWRKLVAPEEFCGHVQSGCCLEI 338


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