BLASTX nr result
ID: Bupleurum21_contig00014820
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00014820
(1822 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25128.3| unnamed protein product [Vitis vinifera] 313 1e-82
gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo] 289 1e-75
ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|2... 289 1e-75
ref|XP_004156873.1| PREDICTED: F-box protein SKIP22-like [Cucumi... 283 8e-74
ref|XP_004150266.1| PREDICTED: F-box protein SKIP22-like [Cucumi... 282 2e-73
>emb|CBI25128.3| unnamed protein product [Vitis vinifera]
Length = 508
Score = 313 bits (801), Expect = 1e-82
Identities = 185/434 (42%), Positives = 257/434 (59%), Gaps = 8/434 (1%)
Frame = +3
Query: 69 MKLRLRSVQTNQTLKIEIPSSSSLENLKQALCLQINSSPDS----IHLSLNRKEELLSIS 236
MKLR+RS+++ +TLKI++P SL++ L L I+SS S I+LSLNRK+EL S
Sbjct: 1 MKLRVRSLESKETLKIQVPDPCSLQHFIHLLSLAISSSSSSSSSIIYLSLNRKDELQVSS 60
Query: 237 PQQTIESLGIISGDXXXXXXXXXXXXXTRPVLQQDSPRVAVVVDSDNNIENMEVEAV--- 407
T++SLG+ SGD T P+ P +V +S+ +E + +
Sbjct: 61 SLDTLQSLGVTSGDLIFYSFNPTAFSQT-PI-----PSETLVSNSERKETLLESQTLAPL 114
Query: 408 -NLNTHEDNCVNLGAEGKIVDLGTQDSVNSETLINMNDVKEGDVGLDDTQMDEDGHDFDV 584
N HE G +V DS +ET + DV DED V
Sbjct: 115 AQANPHEPK-----EYGSLVS----DSKKNETQ-EFSGATSMDVEGGVAAADEDDEPIVV 164
Query: 585 AKSFSVPGFLRKVFMEELRDDGGEHHKLLVIAVHAVLLESGFVGYDPCNNVVIKGFNIPD 764
KSFS P FLRKV EE+ DDG EH KLLVIAVHAV+LESGFVG+D + + + F++ +
Sbjct: 165 KKSFSEPCFLRKVLREEVGDDGNEH-KLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSE 223
Query: 765 KWPSSSFIMSLWYTLPEITNRDGVEVNGVETVVLKFQSMGKLFKVYGSLSTGSAAKHCVS 944
++P ++ MSLWYTLPE+ + + +++V LKFQ +G+ +YGSLS + H VS
Sbjct: 224 EYPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVS 283
Query: 945 VNEYQLVPFLNLIWANCLPGTETNENGVVLSTDPAREVFAFWRIVKDKLVSPLLIDLCDK 1124
++EY+ P L+L+W + E + ++ P EVF FW+IVKD L PLL DLC+K
Sbjct: 284 LDEYRFAPTLDLMWTHSDSAEEKDRGSS--NSYPENEVFEFWKIVKDGLALPLLTDLCEK 341
Query: 1125 VGFELPPCFMRLPTDIKLQILERLPGIDVAKVGSTCSELRYLSSSDDLWKKKFVEQYGDA 1304
G PPC MRLPT++KL+ILE LPG+D+ KVG CSEL YLSS++DLWK+KF E++G+
Sbjct: 342 GGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNV 401
Query: 1305 ESSEGGVHWKEKFA 1346
+G WK+KFA
Sbjct: 402 RVGQGFSLWKDKFA 415
>gb|ADN33816.1| F-box family protein [Cucumis melo subsp. melo]
Length = 502
Score = 289 bits (740), Expect = 1e-75
Identities = 180/438 (41%), Positives = 251/438 (57%), Gaps = 13/438 (2%)
Frame = +3
Query: 69 MKLRLRSVQTNQTLKIEIPSSSSLENLKQALCLQINSS--PDSIHLSLNRKEELLSISPQ 242
MKLRLRS+++ QTL+IE+P S+L +LKQ L ++SS DS+HLSLNRK+EL + SP+
Sbjct: 1 MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
Query: 243 QTIESLGIISGDXXXXXXXXXXXXX----TRPVLQQDSPRVA-----VVVDSDNNIENME 395
++ SLGI SGD P+ P ++ V S ++ +
Sbjct: 61 DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120
Query: 396 VEAVNLNTHEDNCVNLGAEGKIVDLGTQDSVNSETLINMNDVKEGDVGLDDTQMDEDGHD 575
+ ++ + + N E + D + S ++I +D +E +V + T +
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTS-SMIEESDCEEMEVEEEPTVV------ 173
Query: 576 FDVAKSFSVPGFLRKVFMEELRDDGGEHHKLLVIAVHAVLLESGFVGYDPCNNVVIKGFN 755
V K S P FLR+V EEL D H KLLV AVHAVLLESGFV +P F
Sbjct: 174 --VEKKCSRPIFLRRVLKEELGYDRNAH-KLLVTAVHAVLLESGFVLINPNLGFEDSPFR 230
Query: 756 IPDKWPSSSFIMSLWYTLPEITNRDGVEVNGVETVVLKFQSMGKLFKVYGSL--STGSAA 929
+P+ WPS SF MSLWYTLPE+ + G E V+LKFQS+G VYGSL S GS+
Sbjct: 231 MPEDWPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSV 290
Query: 930 KHCVSVNEYQLVPFLNLIWANCLPGTETNENGVVLSTDPAREVFAFWRIVKDKLVSPLLI 1109
+ VS++E + P L+LIW + + +E +P ++VF FW+IVKD L PLLI
Sbjct: 291 -YRVSLDERKFAPNLDLIWVDSVSNYIMDEK----EGNPEKQVFEFWKIVKDALALPLLI 345
Query: 1110 DLCDKVGFELPPCFMRLPTDIKLQILERLPGIDVAKVGSTCSELRYLSSSDDLWKKKFVE 1289
D+C+K G P FM LP D+KL+ILE LPG+D+A+V C+ELRYL+SS++LWK KF +
Sbjct: 346 DICEKTGLPPPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQ 405
Query: 1290 QYGDAESSEGGVHWKEKF 1343
++G + G WK KF
Sbjct: 406 EFGLEDGVSGNRVWKTKF 423
>ref|XP_002327736.1| predicted protein [Populus trichocarpa] gi|222836821|gb|EEE75214.1|
predicted protein [Populus trichocarpa]
Length = 545
Score = 289 bits (740), Expect = 1e-75
Identities = 182/474 (38%), Positives = 270/474 (56%), Gaps = 48/474 (10%)
Frame = +3
Query: 69 MKLRLRSVQTNQTLKIEIPSSSSLENLKQALCLQINSSPDSIHLSLNRKEELLSISPQQT 248
MKLRLRSVQ+ +T+KI++P S +L+ LK+ L I+SS S++LSLNRK+EL + P+ +
Sbjct: 1 MKLRLRSVQSKETVKIQVPDSCTLQQLKETLSRAISSSGSSLYLSLNRKDELNTSLPEDS 60
Query: 249 IESLGIISGDXXXXXXXXXXXXXT-RPVLQQDSPRVAVVVDS----------DNNIENME 395
++SLGI SGD + +P+ S + V D ++ E
Sbjct: 61 LQSLGITSGDLIYFSVNPKDFSSSGQPLCLGSSSSIQEQVQGHRGNVQEPMPDQSMSFQE 120
Query: 396 VEAVNLNTHEDNCVNLGAEGKIVDLGTQDSVNSETLINMND------------------- 518
+ +LN E+ +L +G V + D+ + ET+ ++
Sbjct: 121 SKCSDLNMLENQ--DLFVQGH-VGVQANDTNSRETISEISPQMHLLGQKHGIAESDMNGA 177
Query: 519 VKEGDVGLD---------DTQ-------MDEDGHDFDVA-KSFSVPGFLRKVFMEELRDD 647
V EG L +TQ MD D DV K FS P FLR++ +EL DD
Sbjct: 178 VTEGHGALGSKTRSRETLETQELTSVEAMDVDPGSVDVGNKRFSEPYFLRRLLRKELGDD 237
Query: 648 GGEHHKLLVIAVHAVLLESGFVGYDPCNNVVIKGFNIPDKWPSSSFIMSLWYTLPEITNR 827
G ++KLLVIAVHAV +ESGFVG++ + + + GF++P++ S + +SL YTLPE+ +
Sbjct: 238 GS-NYKLLVIAVHAVFIESGFVGFNSISGMRVDGFHLPEEQSSRNLAVSLCYTLPELLDS 296
Query: 828 DGVEVNGVETVVLKFQSMGKLFKVYGSLSTGSAAKHCVSVNEYQLVPFLNLIWANCL-PG 1004
+ ET+VLK QS+G VYGSLS G + + ++ + VP ++ +W N G
Sbjct: 297 KVI----AETIVLKLQSLGHFVNVYGSLSKGGSGLYHARLDINKFVPAIDFVWENDKNDG 352
Query: 1005 TETNENGVVLSTDPAREVFAFWRIVKDKLVSPLLIDLCDKVGFELPPCFMRLPTDIKLQI 1184
++ +L P E+F FW+IVKD L PLLID+C+K G LP C MRLPT++KL+I
Sbjct: 353 MNGSDRSSILY--PENEIFEFWKIVKDGLALPLLIDICEKAGLVLPSCLMRLPTELKLKI 410
Query: 1185 LERLPGIDVAKVGSTCSELRYLSSSDDLWKKKFVEQYGDAESSEGGVHWKEKFA 1346
E LP ID+AK+ CSE+RYLSS++DLWK+KFVE++GD ++ G ++WK +FA
Sbjct: 411 FELLPAIDIAKMECVCSEMRYLSSNNDLWKQKFVEEFGDGTAAHGTLNWKARFA 464
>ref|XP_004156873.1| PREDICTED: F-box protein SKIP22-like [Cucumis sativus]
Length = 499
Score = 283 bits (725), Expect = 8e-74
Identities = 175/436 (40%), Positives = 253/436 (58%), Gaps = 11/436 (2%)
Frame = +3
Query: 69 MKLRLRSVQTNQTLKIEIPSSSSLENLKQALCLQINSS--PDSIHLSLNRKEELLSISPQ 242
MKLRLRS+++NQ+L+IE+P S+L++LK L ++SS DS+HLSLNRK+EL + SP+
Sbjct: 1 MKLRLRSLESNQSLRIEVPDPSTLDHLKHTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
Query: 243 QTIESLGIISGDXXXXXXXXXXXXXT--------RPVLQQDSPRVAVVVDSDNNIENMEV 398
++ SLGI SGD +P L S +V+ S +E ++
Sbjct: 61 DSLHSLGITSGDLLFFTFKPPEFSSLGATSIQSFQPPLPGSSSQVSS--SSLPQVEGKQL 118
Query: 399 EAVNLNTHEDNCVNLGAEGKIVDLGTQDSVNSETLINMNDVKEGDVGLDDTQMDEDGHDF 578
++ + + N E +V + + + ++I +D +E +V + T + E+
Sbjct: 119 LGIDCDLKKPRLENSEPES-VVPESSSAELTACSMIEESDCEEMEVEEEPTVVVEN---- 173
Query: 579 DVAKSFSVPGFLRKVFMEELRDDGGEHHKLLVIAVHAVLLESGFVGYDPCNNVVIKGFNI 758
S P FLR+V EEL D H KLLV AVHAVLLESGFV +P F +
Sbjct: 174 ----RCSRPIFLRRVLKEELGYDRNAH-KLLVTAVHAVLLESGFVLINPNLGFDDSSFRM 228
Query: 759 PDKWPSSSFIMSLWYTLPEITNRDGVEVNGVETVVLKFQSMGKLFKVYGSLS-TGSAAKH 935
P+ WPS SF MSLWYTLPE+ + E V+LKFQS+G VYGSLS + ++ +
Sbjct: 229 PEDWPSPSFTMSLWYTLPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVY 288
Query: 936 CVSVNEYQLVPFLNLIWANCLPGTETNENGVVLSTDPAREVFAFWRIVKDKLVSPLLIDL 1115
VS++E + P L+LIW + + +E +P ++VF FW+IVKD L PLLID+
Sbjct: 289 RVSLDERKFAPNLDLIWVDSVSNYIMDEK----EGNPEKQVFEFWKIVKDALALPLLIDI 344
Query: 1116 CDKVGFELPPCFMRLPTDIKLQILERLPGIDVAKVGSTCSELRYLSSSDDLWKKKFVEQY 1295
C+K G P FM LP D+KL+ILE L G+D+A+V C+ELRYL+SS++LWK KF +++
Sbjct: 345 CEKTGLPPPASFMLLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEF 404
Query: 1296 GDAESSEGGVHWKEKF 1343
G + G +WK KF
Sbjct: 405 GLEDGVSGNRNWKAKF 420
>ref|XP_004150266.1| PREDICTED: F-box protein SKIP22-like [Cucumis sativus]
Length = 499
Score = 282 bits (721), Expect = 2e-73
Identities = 174/436 (39%), Positives = 253/436 (58%), Gaps = 11/436 (2%)
Frame = +3
Query: 69 MKLRLRSVQTNQTLKIEIPSSSSLENLKQALCLQINSS--PDSIHLSLNRKEELLSISPQ 242
MKLRLRS+++NQ+L+IE+P S+L++LK L ++SS DS+HLSLNRK+EL + SP+
Sbjct: 1 MKLRLRSLESNQSLRIEVPDPSTLDHLKHTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60
Query: 243 QTIESLGIISGDXXXXXXXXXXXXXT--------RPVLQQDSPRVAVVVDSDNNIENMEV 398
++ SLGI SGD +P L S +V+ S +E ++
Sbjct: 61 DSLHSLGITSGDLLFFTFKPPEFSSLGATSIQSFQPPLPGSSSQVSS--SSLPQVEGKQL 118
Query: 399 EAVNLNTHEDNCVNLGAEGKIVDLGTQDSVNSETLINMNDVKEGDVGLDDTQMDEDGHDF 578
++ + + N E +V + + + ++I +D +E +V + T + E+
Sbjct: 119 LGIDCDLKKPRLENSEPES-VVPESSSAELTACSMIEESDCEEMEVEEEPTVVVEN---- 173
Query: 579 DVAKSFSVPGFLRKVFMEELRDDGGEHHKLLVIAVHAVLLESGFVGYDPCNNVVIKGFNI 758
S P FLR+V EEL D H KLLV AVHAVLLESGFV +P F +
Sbjct: 174 ----RCSRPIFLRRVLKEELGYDRNAH-KLLVTAVHAVLLESGFVLINPNLGFDDSPFRM 228
Query: 759 PDKWPSSSFIMSLWYTLPEITNRDGVEVNGVETVVLKFQSMGKLFKVYGSLS-TGSAAKH 935
P+ WPS SF MSLWYT+PE+ + E V+LKFQS+G VYGSLS + ++ +
Sbjct: 229 PEDWPSPSFTMSLWYTIPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVY 288
Query: 936 CVSVNEYQLVPFLNLIWANCLPGTETNENGVVLSTDPAREVFAFWRIVKDKLVSPLLIDL 1115
VS++E + P L+LIW + + +E +P ++VF FW+IVKD L PLLID+
Sbjct: 289 RVSLDERKFAPNLDLIWVDSVSNYILDEK----EGNPEKQVFEFWKIVKDALALPLLIDI 344
Query: 1116 CDKVGFELPPCFMRLPTDIKLQILERLPGIDVAKVGSTCSELRYLSSSDDLWKKKFVEQY 1295
C+K G P FM LP D+KL+ILE L G+D+A+V C+ELRYL+SS++LWK KF +++
Sbjct: 345 CEKTGLPPPASFMLLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEF 404
Query: 1296 GDAESSEGGVHWKEKF 1343
G + G +WK KF
Sbjct: 405 GLEDGVSGNRNWKAKF 420