BLASTX nr result

ID: Bupleurum21_contig00014815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014815
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM12784.1| putative pectate-lyase [Capsicum annuum]               171   6e-41
gb|AEN70977.1| pectate lyase [Gossypium hirsutum subsp. latifolium]   167   1e-39
gb|AEN70964.1| pectate lyase [Gossypium laxum] gi|345104323|gb|A...   167   1e-39
gb|AEN70963.1| pectate lyase [Gossypium thurberi] gi|345104289|g...   167   1e-39
gb|ADB90479.1| pectate lyase [Gossypium barbadense] gi|345104291...   167   1e-39

>gb|AAM12784.1| putative pectate-lyase [Capsicum annuum]
          Length = 324

 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/83 (92%), Positives = 79/83 (95%)
 Frame = +3

Query: 150 NPDLVVHEVHRSINTSRRNLGFLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAI 329
           NP  VV EVHRSIN SRRNLG+LSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAI
Sbjct: 26  NPQQVVDEVHRSINGSRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAI 85

Query: 330 GGRDGKIYVVTDSGDDNPVTPKP 398
           GGRDGKIYVVTDSGDD+PVTPKP
Sbjct: 86  GGRDGKIYVVTDSGDDDPVTPKP 108


>gb|AEN70977.1| pectate lyase [Gossypium hirsutum subsp. latifolium]
          Length = 411

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 141 PHPNPDLVVHEVHRSINTSRRNLGFLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 320
           P  +P+LVV +VHR+IN SRRNLG+LSCGTGNPIDDCWRCDPNWE NRQ+LADCAIGFGK
Sbjct: 32  PVQDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGK 91

Query: 321 NAIGGRDGKIYVVTDSGDDNPVTPKP 398
           NAIGGRDGKIYVVTDSGDD+PV PKP
Sbjct: 92  NAIGGRDGKIYVVTDSGDDDPVNPKP 117


>gb|AEN70964.1| pectate lyase [Gossypium laxum] gi|345104323|gb|AEN70983.1| pectate
           lyase [Gossypium aridum]
          Length = 411

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 141 PHPNPDLVVHEVHRSINTSRRNLGFLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 320
           P  +P+LVV +VHR+IN SRRNLG+LSCGTGNPIDDCWRCDPNWE NRQ+LADCAIGFGK
Sbjct: 32  PVQDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGK 91

Query: 321 NAIGGRDGKIYVVTDSGDDNPVTPKP 398
           NAIGGRDGKIYVVTDSGDD+PV PKP
Sbjct: 92  NAIGGRDGKIYVVTDSGDDDPVNPKP 117


>gb|AEN70963.1| pectate lyase [Gossypium thurberi] gi|345104289|gb|AEN70966.1|
           pectate lyase [Gossypium turneri]
           gi|345104315|gb|AEN70979.1| pectate lyase [Gossypium
           armourianum] gi|345104317|gb|AEN70980.1| pectate lyase
           [Gossypium harknessii] gi|345104329|gb|AEN70986.1|
           pectate lyase [Gossypium trilobum]
          Length = 411

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 141 PHPNPDLVVHEVHRSINTSRRNLGFLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 320
           P  +P+LVV +VHR+IN SRRNLG+LSCGTGNPIDDCWRCDPNWE NRQ+LADCAIGFGK
Sbjct: 32  PVQDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGK 91

Query: 321 NAIGGRDGKIYVVTDSGDDNPVTPKP 398
           NAIGGRDGKIYVVTDSGDD+PV PKP
Sbjct: 92  NAIGGRDGKIYVVTDSGDDDPVNPKP 117


>gb|ADB90479.1| pectate lyase [Gossypium barbadense] gi|345104291|gb|AEN70967.1|
           pectate lyase [Gossypium mustelinum]
           gi|345104295|gb|AEN70969.1| pectate lyase [Gossypium
           darwinii] gi|345104299|gb|AEN70971.1| pectate lyase
           [Gossypium tomentosum] gi|345104303|gb|AEN70973.1|
           pectate lyase [Gossypium barbadense var. brasiliense]
           gi|345104307|gb|AEN70975.1| pectate lyase [Gossypium
           barbadense var. peruvianum]
          Length = 411

 Score =  167 bits (422), Expect = 1e-39
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +3

Query: 141 PHPNPDLVVHEVHRSINTSRRNLGFLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 320
           P  +P+LVV +VHR+IN SRRNLG+LSCGTGNPIDDCWRCDPNWE NRQ+LADCAIGFGK
Sbjct: 32  PVQDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGK 91

Query: 321 NAIGGRDGKIYVVTDSGDDNPVTPKP 398
           NAIGGRDGKIYVVTDSGDD+PV PKP
Sbjct: 92  NAIGGRDGKIYVVTDSGDDDPVNPKP 117


Top