BLASTX nr result

ID: Bupleurum21_contig00014793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014793
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310175.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|NP_179928.2| uncharacterized protein [Arabidopsis thaliana] ...   158   5e-37
ref|XP_002880506.1| hypothetical protein ARALYDRAFT_481217 [Arab...   158   5e-37
ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot...   157   1e-36
ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cu...   157   1e-36

>ref|XP_002310175.1| predicted protein [Populus trichocarpa] gi|222853078|gb|EEE90625.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/90 (88%), Positives = 88/90 (97%)
 Frame = -1

Query: 326 TASLASAFDTNLKRVRFSTSVVFSLSVGLELLTPAFPQYFLLLASIANIAKQISLACYLA 147
           TASLASAFDTNLKRVRF+TSV+FSLS+G+ELLTP FPQYFLLLA++ANIAKQISLACYLA
Sbjct: 60  TASLASAFDTNLKRVRFTTSVLFSLSIGIELLTPTFPQYFLLLATLANIAKQISLACYLA 119

Query: 146 TSSAVHRSFAIADNLGEVSAKAQIQSVSFD 57
           T SAVHRSFAIADN+GEVSAKAQIQ+VSFD
Sbjct: 120 TGSAVHRSFAIADNIGEVSAKAQIQTVSFD 149


>ref|NP_179928.2| uncharacterized protein [Arabidopsis thaliana]
           gi|51970902|dbj|BAD44143.1| unnamed protein product
           [Arabidopsis thaliana] gi|330252365|gb|AEC07459.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 520

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/90 (88%), Positives = 87/90 (96%)
 Frame = -1

Query: 326 TASLASAFDTNLKRVRFSTSVVFSLSVGLELLTPAFPQYFLLLASIANIAKQISLACYLA 147
           TASLASAFDTNLKRVRFSTSV+FSLS+G+EL+TP FPQYFLLLASIANIAKQISL+CYLA
Sbjct: 192 TASLASAFDTNLKRVRFSTSVLFSLSIGVELMTPVFPQYFLLLASIANIAKQISLSCYLA 251

Query: 146 TSSAVHRSFAIADNLGEVSAKAQIQSVSFD 57
           T SAVHRSFA+ADNLGEVSAKAQIQ+V FD
Sbjct: 252 TGSAVHRSFAVADNLGEVSAKAQIQTVCFD 281


>ref|XP_002880506.1| hypothetical protein ARALYDRAFT_481217 [Arabidopsis lyrata subsp.
           lyrata] gi|297326345|gb|EFH56765.1| hypothetical protein
           ARALYDRAFT_481217 [Arabidopsis lyrata subsp. lyrata]
          Length = 519

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/90 (88%), Positives = 87/90 (96%)
 Frame = -1

Query: 326 TASLASAFDTNLKRVRFSTSVVFSLSVGLELLTPAFPQYFLLLASIANIAKQISLACYLA 147
           TASLASAFDTNLKRVRFSTSV+FSLS+G+EL+TP FPQYFLLLASIANIAKQISL+CYLA
Sbjct: 191 TASLASAFDTNLKRVRFSTSVLFSLSIGVELMTPVFPQYFLLLASIANIAKQISLSCYLA 250

Query: 146 TSSAVHRSFAIADNLGEVSAKAQIQSVSFD 57
           T SAVHRSFA+ADNLGEVSAKAQIQ+V FD
Sbjct: 251 TGSAVHRSFAVADNLGEVSAKAQIQTVCFD 280


>ref|XP_004163622.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58-like
           [Cucumis sativus]
          Length = 523

 Score =  157 bits (396), Expect = 1e-36
 Identities = 79/90 (87%), Positives = 87/90 (96%)
 Frame = -1

Query: 326 TASLASAFDTNLKRVRFSTSVVFSLSVGLELLTPAFPQYFLLLASIANIAKQISLACYLA 147
           TAS+ASAFDTNLKRVRFST+V+FSLS+G+ELLTPAFPQYFLLLASIANI KQISL CYL+
Sbjct: 193 TASIASAFDTNLKRVRFSTAVLFSLSIGVELLTPAFPQYFLLLASIANIVKQISLGCYLS 252

Query: 146 TSSAVHRSFAIADNLGEVSAKAQIQSVSFD 57
           T+SAVHRSFA+ADNLGEVSAKAQIQSV FD
Sbjct: 253 TASAVHRSFAVADNLGEVSAKAQIQSVCFD 282


>ref|XP_004148047.1| PREDICTED: UPF0420 protein C16orf58-like [Cucumis sativus]
          Length = 523

 Score =  157 bits (396), Expect = 1e-36
 Identities = 79/90 (87%), Positives = 87/90 (96%)
 Frame = -1

Query: 326 TASLASAFDTNLKRVRFSTSVVFSLSVGLELLTPAFPQYFLLLASIANIAKQISLACYLA 147
           TAS+ASAFDTNLKRVRFST+V+FSLS+G+ELLTPAFPQYFLLLASIANI KQISL CYL+
Sbjct: 193 TASIASAFDTNLKRVRFSTAVLFSLSIGVELLTPAFPQYFLLLASIANIVKQISLGCYLS 252

Query: 146 TSSAVHRSFAIADNLGEVSAKAQIQSVSFD 57
           T+SAVHRSFA+ADNLGEVSAKAQIQSV FD
Sbjct: 253 TASAVHRSFAVADNLGEVSAKAQIQSVCFD 282


Top