BLASTX nr result

ID: Bupleurum21_contig00014792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014792
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611655.1| F-box-like/WD repeat-containing protein TBL1...   116   2e-24
ref|XP_002866709.1| WD-40 repeat family protein [Arabidopsis lyr...   115   3e-24
ref|NP_201533.1| WD-40 repeat family protein [Arabidopsis thalia...   115   3e-24
ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing p...   114   6e-24
emb|CBI33743.3| unnamed protein product [Vitis vinifera]              113   2e-23

>ref|XP_003611655.1| F-box-like/WD repeat-containing protein TBL1XR1 [Medicago
           truncatula] gi|355512990|gb|AES94613.1| F-box-like/WD
           repeat-containing protein TBL1XR1 [Medicago truncatula]
          Length = 190

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/77 (64%), Positives = 64/77 (83%)
 Frame = +2

Query: 68  YRTARDAVFSIAFSPNGEYLASGSKDASIHIWSVKTGKMVKSYSGEGSIYEVCWNNEGNK 247
           YR  +D V+S+AFSPNGEYLASGS D SI+IWS+  GK++K+Y+G G I+EVCWN EG+K
Sbjct: 114 YRLFQDGVYSVAFSPNGEYLASGSPDKSINIWSLNDGKIIKTYNGNGGIFEVCWNKEGDK 173

Query: 248 VAACTNQNTVVVMDFRM 298
           +AAC + NTV V+DFRM
Sbjct: 174 IAACFSNNTVCVLDFRM 190


>ref|XP_002866709.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312544|gb|EFH42968.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 617

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = +2

Query: 80  RDAVFSIAFSPNGEYLASGSKDASIHIWSVKTGKMVKSYSGEGSIYEVCWNNEGNKVAAC 259
           R+ V+S+AFSPNGEY+ASGS D SIHIWS+K GK+VK+Y+G G I+EVCWN EGNK+AAC
Sbjct: 545 REPVYSLAFSPNGEYIASGSLDRSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAAC 604

Query: 260 TNQNTVVVMDFRM 298
              N+V V+DFRM
Sbjct: 605 FADNSVCVLDFRM 617


>ref|NP_201533.1| WD-40 repeat family protein [Arabidopsis thaliana]
           gi|9758431|dbj|BAB09017.1| unnamed protein product
           [Arabidopsis thaliana] gi|16323188|gb|AAL15328.1|
           AT5g67320/K8K14_4 [Arabidopsis thaliana]
           gi|23506023|gb|AAN28871.1| At5g67320/K8K14_4
           [Arabidopsis thaliana] gi|332010945|gb|AED98328.1| WD-40
           repeat family protein [Arabidopsis thaliana]
          Length = 613

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = +2

Query: 80  RDAVFSIAFSPNGEYLASGSKDASIHIWSVKTGKMVKSYSGEGSIYEVCWNNEGNKVAAC 259
           R+ V+S+AFSPNGEY+ASGS D SIHIWS+K GK+VK+Y+G G I+EVCWN EGNK+AAC
Sbjct: 541 REPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAAC 600

Query: 260 TNQNTVVVMDFRM 298
              N+V V+DFRM
Sbjct: 601 FADNSVCVLDFRM 613


>ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Cucumis sativus] gi|449513123|ref|XP_004164237.1|
           PREDICTED: F-box-like/WD repeat-containing protein
           TBL1XR1-like [Cucumis sativus]
          Length = 594

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = +2

Query: 80  RDAVFSIAFSPNGEYLASGSKDASIHIWSVKTGKMVKSYSGEGSIYEVCWNNEGNKVAAC 259
           R+ V+S+AFSPNGEYLASGS D S+HIWS+K GK+VK+Y+G G I+EVCWN EG+K+AAC
Sbjct: 522 REPVYSVAFSPNGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAAC 581

Query: 260 TNQNTVVVMDFRM 298
              NTV V+DFRM
Sbjct: 582 FANNTVCVLDFRM 594


>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = +2

Query: 80  RDAVFSIAFSPNGEYLASGSKDASIHIWSVKTGKMVKSYSGEGSIYEVCWNNEGNKVAAC 259
           RD V+S+AFSPNGEYLASGS D S+HIWS+K  K+VK+Y+G G I+EVCWN EG+K+AAC
Sbjct: 653 RDPVYSVAFSPNGEYLASGSLDRSMHIWSLKERKIVKTYTGNGGIFEVCWNKEGDKIAAC 712

Query: 260 TNQNTVVVMDFRM 298
              NTV V+DFRM
Sbjct: 713 FANNTVCVLDFRM 725


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