BLASTX nr result

ID: Bupleurum21_contig00014769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014769
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|2...   130   6e-34
ref|XP_002525300.1| conserved hypothetical protein [Ricinus comm...   128   9e-32
ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780...   115   2e-31
gb|ACU20185.1| unknown [Glycine max]                                  115   2e-31
ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813...   117   3e-30

>ref|XP_002320007.1| predicted protein [Populus trichocarpa] gi|222860780|gb|EEE98322.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  130 bits (327), Expect(2) = 6e-34
 Identities = 73/157 (46%), Positives = 106/157 (67%), Gaps = 8/157 (5%)
 Frame = -3

Query: 641 TEKHPVLSNEIPIVDKSVIKEENVVQ----NMQFSAPSKVYGETDEDDADEWLKEEASET 474
           TEKHPV S ++ I+DKSV++E  V Q    +   S+ S +  E  +DD D+WLK+++SE 
Sbjct: 349 TEKHPVESTQMQIIDKSVVEEGKVDQTKHQHSSSSSSSGILEEKFDDDGDDWLKDDSSEM 408

Query: 473 VGSSERTIPIDNDEDVSFSDL-EDEGDVPSISTKVAYSSDSST--TRDWVQLGRNSAPG- 306
           +G S  ++P+ NDEDVSFSDL ED+GD P+   KVA  SD +T  ++DWVQL R+SA   
Sbjct: 409 IGVSGSSMPLGNDEDVSFSDLEEDDGDEPASYKKVASGSDCATKGSQDWVQLSRSSADSV 468

Query: 305 KDANCVTSECDTPKQVNRHEPENKDSNDWLDLDEIEV 195
           KD   V+ +    ++V+    ENK+S+DWLD+D+I+V
Sbjct: 469 KDIKPVSIKNAGSEKVSARNSENKESSDWLDVDDIDV 505



 Score = 40.8 bits (94), Expect(2) = 6e-34
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = -2

Query: 933 EVLSTPQIVKARSLLTQNSIRNHTLINLEQDLSNKGAPSNNEDVKSPNVEFLYAPSNTQL 754
           E+LSTPQIV+AR++L+ + ++N        D S  G  ++N     P+ E L  PS  + 
Sbjct: 256 ELLSTPQIVEARAMLS-HELQNKAKAKSTPDWS--GVDTSNVKADLPHEESLSVPSRAKS 312

Query: 753 KTVPIETS 730
           ++VPI TS
Sbjct: 313 ESVPIMTS 320


>ref|XP_002525300.1| conserved hypothetical protein [Ricinus communis]
           gi|223535458|gb|EEF37128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 501

 Score =  128 bits (322), Expect(2) = 9e-32
 Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 7/159 (4%)
 Frame = -3

Query: 650 DVVTEKHPVLSNEIPIVDKSVIKEENVVQNMQ---FSAPSKVYGETDEDDADEWLKEEAS 480
           ++ TEKH V S E+ I+DK+V++EE   Q       S+ S V  E  EDD D+WL EE+S
Sbjct: 342 ELETEKHLVQSTEMRIIDKAVVEEEPAYQAKHQYLSSSTSNVPDEKSEDDGDDWLNEESS 401

Query: 479 ETVGSSERTIPIDNDEDVSFSDL-EDEGDVPSISTKVAYSSDSST--TRDWVQLGRNSAP 309
             VG S  TI I+NDEDVSFSDL ED+G+VP    KV   SD+S+   RDWVQL  +SA 
Sbjct: 402 VMVGPSGTTIHIENDEDVSFSDLEEDDGEVPVSYKKVTSGSDASSKDPRDWVQLSESSAL 461

Query: 308 G-KDANCVTSECDTPKQVNRHEPENKDSNDWLDLDEIEV 195
             KD N V  +    +QV+    ++K+SNDWLD+D+I+V
Sbjct: 462 SVKDINPVAVKHVGSEQVSARNSDSKESNDWLDVDDIDV 500



 Score = 35.4 bits (80), Expect(2) = 9e-32
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = -2

Query: 933 EVLSTPQIVKARSLLTQNSIRNHTLIN----LEQDLSNKGAPSNNEDVKSPNVEFLYAPS 766
           E+LSTPQ+V+AR++L      +H L N     +   S  G+  + +    P+ E L  PS
Sbjct: 251 ELLSTPQVVEARAML------SHELPNRAKPTKSGWSETGSSISTKTAGLPHEEPLSVPS 304

Query: 765 NTQLKTVPIETS 730
             + ++ P++TS
Sbjct: 305 RPETESAPLKTS 316


>ref|XP_003517358.1| PREDICTED: uncharacterized protein LOC100780902 [Glycine max]
          Length = 466

 Score =  115 bits (289), Expect(2) = 2e-31
 Identities = 75/161 (46%), Positives = 98/161 (60%), Gaps = 8/161 (4%)
 Frame = -3

Query: 653 TDVVTEKHPVLSNEIPIVDKSVIKEENVVQNMQFSAP---SKVYGETDEDDADEWLKEE- 486
           +DV  EKH V      I+DKSV+KE  V+ + + S+    ++   ET +DDAD+WLKEE 
Sbjct: 309 SDVEMEKHVVPE----IIDKSVVKEAPVISSAEQSSSGSTNRFLDETYDDDADDWLKEED 364

Query: 485 ASETVGSSERTIPIDNDEDVSFSDL-EDEGDVPSISTKVAYSSDSST--TRDWVQLGRNS 315
            SE VG S  ++   NDEDVSFSDL ED+GDV     K    SDSST  +RDWVQLGR+S
Sbjct: 365 TSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKKTRSGSDSSTKDSRDWVQLGRSS 424

Query: 314 A-PGKDANCVTSECDTPKQVNRHEPENKDSNDWLDLDEIEV 195
               KD N V  +    +  +      KDSNDWL++D+I+V
Sbjct: 425 PNSDKDINSVEGKHVGSQHSSARNSVTKDSNDWLNVDDIDV 465



 Score = 47.0 bits (110), Expect(2) = 2e-31
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 930 VLSTPQIVKARSLLTQNSIRNHTLINLEQDLSNKG-APSNNEDVKSPNVEFLYAPSNTQL 754
           +LSTPQI++AR++LTQ ++   +    E DLS  G  PS  E+      + L+ PSN QL
Sbjct: 238 ILSTPQIMEARAMLTQ-ALDKRSKEKKESDLSAGGNIPSKEEE------QHLFVPSNAQL 290

Query: 753 KTVPIETS 730
           + VP++TS
Sbjct: 291 EPVPLQTS 298


>gb|ACU20185.1| unknown [Glycine max]
          Length = 340

 Score =  115 bits (289), Expect(2) = 2e-31
 Identities = 75/161 (46%), Positives = 98/161 (60%), Gaps = 8/161 (4%)
 Frame = -3

Query: 653 TDVVTEKHPVLSNEIPIVDKSVIKEENVVQNMQFSAP---SKVYGETDEDDADEWLKEE- 486
           +DV  EKH V      I+DKSV+KE  V+ + + S+    ++   ET +DDAD+WLKEE 
Sbjct: 183 SDVEMEKHVVPE----IIDKSVVKEAPVISSAEQSSSGSTNRFLDETYDDDADDWLKEED 238

Query: 485 ASETVGSSERTIPIDNDEDVSFSDL-EDEGDVPSISTKVAYSSDSST--TRDWVQLGRNS 315
            SE VG S  ++   NDEDVSFSDL ED+GDV     K    SDSST  +RDWVQLGR+S
Sbjct: 239 TSEMVGPSGTSVHTGNDEDVSFSDLEEDDGDVHESYKKTRSGSDSSTKDSRDWVQLGRSS 298

Query: 314 A-PGKDANCVTSECDTPKQVNRHEPENKDSNDWLDLDEIEV 195
               KD N V  +    +  +      KDSNDWL++D+I+V
Sbjct: 299 PNSDKDINSVEGKHVGSQHSSARNSVTKDSNDWLNVDDIDV 339



 Score = 47.0 bits (110), Expect(2) = 2e-31
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 930 VLSTPQIVKARSLLTQNSIRNHTLINLEQDLSNKG-APSNNEDVKSPNVEFLYAPSNTQL 754
           +LSTPQI++AR++LTQ ++   +    E DLS  G  PS  E+      + L+ PSN QL
Sbjct: 112 ILSTPQIMEARAMLTQ-ALDKRSKEKKESDLSAGGNIPSKEEE------QHLFVPSNAQL 164

Query: 753 KTVPIETS 730
           + VP++TS
Sbjct: 165 EPVPLQTS 172


>ref|XP_003539258.1| PREDICTED: uncharacterized protein LOC100813259 [Glycine max]
          Length = 475

 Score =  117 bits (293), Expect(2) = 3e-30
 Identities = 74/161 (45%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
 Frame = -3

Query: 653 TDVVTEKHPVLSNEIPIVDKSVIKEENVVQNMQFSAP---SKVYGETDEDDADEWLKEE- 486
           ++V  EKH   S    ++DKSV+KE  V  + + S+    ++   E+ EDDAD+WLKEE 
Sbjct: 314 SNVEMEKHATQSIVPEVIDKSVVKEATVNPSAEQSSSGSTNRFLDESYEDDADDWLKEED 373

Query: 485 ASETVGSSERTIPIDNDEDVSFSDL-EDEGDVPSISTKVAYSSDSST--TRDWVQLGRNS 315
            SE VG S   +   NDEDVSFSDL ED+GDV     K    SDSST  +RDWVQLGR+S
Sbjct: 374 TSEMVGPSGTPVHTGNDEDVSFSDLEEDDGDVHESYKKTRSGSDSSTKDSRDWVQLGRSS 433

Query: 314 A-PGKDANCVTSECDTPKQVNRHEPENKDSNDWLDLDEIEV 195
               KD NCV  +    +  +      KDSNDWL++D+I+V
Sbjct: 434 PNSDKDLNCVEGKHVGSEHSSARNSMTKDSNDWLNVDDIDV 474



 Score = 41.6 bits (96), Expect(2) = 3e-30
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -2

Query: 930 VLSTPQIVKARSLLTQNSIRNHTLINLEQDLSNKG-APSNNEDVKSPNVEFLYAPSNTQL 754
           +LSTPQI++AR++LT  ++   +    E DLS  G  PS  E+      + L+ PS  QL
Sbjct: 243 ILSTPQIMEARAMLTL-ALDKRSKEKKESDLSAGGNVPSKEEE------QHLFVPSTVQL 295

Query: 753 KTVPIETS 730
           ++ P++TS
Sbjct: 296 ESAPLQTS 303


Top