BLASTX nr result

ID: Bupleurum21_contig00014766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014766
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN41154.1| unknown [Picea sitchensis]                              92   2e-18
gb|AFC89654.1| RBP42 [Elaeis guineensis]                               96   4e-18
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...    87   2e-17
gb|ABK24718.1| unknown [Picea sitchensis] gi|148910800|gb|ABR184...    86   2e-16
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16

>gb|ACN41154.1| unknown [Picea sitchensis]
          Length = 446

 Score = 92.0 bits (227), Expect(2) = 2e-18
 Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
 Frame = -1

Query: 190 VRTIADNDPAQRKLFVRGLGWETTTEKLQGIFSAFGEVAEAIVI----TGKSKGYGFVTF 23
           VR+IAD DPAQRKLFVRGLGW+T TE L+ +FS FGE+ E +VI    TGKSKGYGFVTF
Sbjct: 53  VRSIADKDPAQRKLFVRGLGWDTNTESLKALFSQFGELEEGVVIMDKNTGKSKGYGFVTF 112

Query: 22  KDL*GLI 2
           K + G +
Sbjct: 113 KHMDGAL 119



 Score = 25.4 bits (54), Expect(2) = 2e-18
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -2

Query: 273 TAPVSDPFTKDQLLEIVQAA 214
           T  + +PFT++QLL+I+Q A
Sbjct: 23  TRKMLEPFTREQLLDILQEA 42


>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 4/68 (5%)
 Frame = -1

Query: 193 AVRTIADNDPAQRKLFVRGLGWETTTEKLQGIFSAFGEVAEAIVI----TGKSKGYGFVT 26
           AVR IAD DPAQRKLF+RGLGWETTTE L+ +FS++GE+ EA+VI    TGKSKGYGF+T
Sbjct: 57  AVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFIT 116

Query: 25  FKDL*GLI 2
           F+ + G +
Sbjct: 117 FRHIDGAL 124


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score = 87.4 bits (215), Expect(2) = 2e-17
 Identities = 43/68 (63%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
 Frame = -1

Query: 193 AVRTIADNDPAQRKLFVRGLGWETTTEKLQGIFSAFGEVAEAIVI----TGKSKGYGFVT 26
           A+R+IAD D  QRKLF+RGLGW+TTTE L+ +FSA+GE+ EA+VI    T KSKGYGFVT
Sbjct: 59  AIRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVT 118

Query: 25  FKDL*GLI 2
           FK + G +
Sbjct: 119 FKHVDGAL 126



 Score = 26.2 bits (56), Expect(2) = 2e-17
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 264 VSDPFTKDQLLEIVQAAIIR 205
           + +PF  DQLLEI+Q A +R
Sbjct: 33  IIEPFGHDQLLEILQNAAVR 52


>gb|ABK24718.1| unknown [Picea sitchensis] gi|148910800|gb|ABR18466.1| unknown
           [Picea sitchensis]
          Length = 442

 Score = 86.3 bits (212), Expect(2) = 2e-16
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
 Frame = -1

Query: 193 AVRTIADNDPAQRKLFVRGLGWETTTEKLQGIFSAFGEVAEAIVI----TGKSKGYGFVT 26
           ++R +AD DPA RK+FVRGLGWETT+E L+ +FS +GE+ E  VI    TGKSKGYGFVT
Sbjct: 79  SIRKLADKDPAHRKIFVRGLGWETTSEALKSVFSQYGELEECTVITDKGTGKSKGYGFVT 138

Query: 25  FKDL*G 8
           FK + G
Sbjct: 139 FKHMVG 144



 Score = 23.9 bits (50), Expect(2) = 2e-16
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 258 DPFTKDQLLEIVQAAIIRDP 199
           +PF K+QL++I+     +DP
Sbjct: 55  EPFNKEQLMDIISEHAKKDP 74


>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
 Frame = -1

Query: 193 AVRTIADNDPAQRKLFVRGLGWETTTEKLQGIFSAFGEVAEAIVI----TGKSKGYGFVT 26
           AVR+IAD D  QRKLF+RGLGWETTTE L+ +FS +GE+ EA+VI    TGKSKGYGFV 
Sbjct: 61  AVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVI 120

Query: 25  FKDL*GLI 2
           +K + G +
Sbjct: 121 YKHVDGAL 128


Top