BLASTX nr result

ID: Bupleurum21_contig00014744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014744
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517974.1| conserved hypothetical protein [Ricinus comm...   231   2e-58
ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|2...   230   3e-58
emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]   213   4e-53
ref|NP_171852.2| nuclear assembly factor 1 [Arabidopsis thaliana...   213   7e-53
gb|AAO64742.1| At1g03530 [Arabidopsis thaliana] gi|110735969|dbj...   213   7e-53

>ref|XP_002517974.1| conserved hypothetical protein [Ricinus communis]
           gi|223542956|gb|EEF44492.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 786

 Score =  231 bits (589), Expect = 2e-58
 Identities = 119/190 (62%), Positives = 135/190 (71%), Gaps = 9/190 (4%)
 Frame = -2

Query: 830 EEEKVAWSD------EDEEFGKA---GPIMSANEIKILPPVPPVAVTLEPCHETLPVGAV 678
           E+  V WSD      E+EE G     GPI S NE+K LPPVPPV VTL+P H+ LPVG V
Sbjct: 349 EKNMVEWSDVEFDDIEEEEEGTGLMKGPIRSQNELKFLPPVPPVDVTLQPHHQVLPVGVV 408

Query: 677 LSIVGAQVIVEGMEKHNPLNEGSVLWITEKRSPLGIVDEIFGPVKNPYYIVRYNSENEVP 498
           LSI+ AQVIVEG+EKHNPLNEGS+LWITEKRSPLG+VDEIFGPV+NPYY+VRYNSE+EVP
Sbjct: 409 LSIINAQVIVEGVEKHNPLNEGSILWITEKRSPLGLVDEIFGPVQNPYYVVRYNSESEVP 468

Query: 497 DGIQQGTLISFVPEFVNHILNNGNLYKKGYDAXXXXXXXXXXXXXXXXXXXXXEYKRLQK 318
            GI QGT ISFV EF NH+LN  NLYKKGYDA                     EY R++K
Sbjct: 469 SGISQGTRISFVAEFANHVLNEKNLYKKGYDASGENDEELSDEAEFSDDEKEAEYMRMKK 528

Query: 317 LSKRGPNAPT 288
           +SKRG N  T
Sbjct: 529 MSKRGINGQT 538


>ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|222870452|gb|EEF07583.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  230 bits (587), Expect = 3e-58
 Identities = 117/187 (62%), Positives = 136/187 (72%), Gaps = 7/187 (3%)
 Frame = -2

Query: 842 MDVFEEEK----VAWSDEDEE---FGKAGPIMSANEIKILPPVPPVAVTLEPCHETLPVG 684
           ++VFEEE     V WSD DE+     +  PI S NE+K LPPVPPV  +LEP H+   VG
Sbjct: 256 VEVFEEEDGDKMVEWSDFDEDEDAVNEGDPIRSKNELKFLPPVPPVVASLEPHHQMQAVG 315

Query: 683 AVLSIVGAQVIVEGMEKHNPLNEGSVLWITEKRSPLGIVDEIFGPVKNPYYIVRYNSENE 504
           AVLS +G+QVIVEG+EKHNPLNEGS+LWITEKRSPLG+VDEIFGPVKNPYY+VRYNSE+E
Sbjct: 316 AVLSAIGSQVIVEGVEKHNPLNEGSILWITEKRSPLGLVDEIFGPVKNPYYVVRYNSESE 375

Query: 503 VPDGIQQGTLISFVPEFVNHILNNGNLYKKGYDAXXXXXXXXXXXXXXXXXXXXXEYKRL 324
           VP GI  GT+ISFVPEF NH+LN+ NLYKKGYDA                     EYKR+
Sbjct: 376 VPGGIHNGTVISFVPEFANHVLNDKNLYKKGYDASGEFDEELTKEAEFSDDDEEAEYKRM 435

Query: 323 QKLSKRG 303
            K+SKRG
Sbjct: 436 LKMSKRG 442


>emb|CAN75706.1| hypothetical protein VITISV_031419 [Vitis vinifera]
          Length = 641

 Score =  213 bits (543), Expect = 4e-53
 Identities = 112/183 (61%), Positives = 130/183 (71%), Gaps = 5/183 (2%)
 Frame = -2

Query: 830 EEEKVAWSD---EDEEFG--KAGPIMSANEIKILPPVPPVAVTLEPCHETLPVGAVLSIV 666
           EEE +A SD   ED+  G  K G I S NEI+ LPPVPP+ VTL+P H+TLPVG V SI+
Sbjct: 192 EEEMIAGSDYDGEDDSCGNVKGGAIKSKNEIEALPPVPPLDVTLQPHHQTLPVGVVSSII 251

Query: 665 GAQVIVEGMEKHNPLNEGSVLWITEKRSPLGIVDEIFGPVKNPYYIVRYNSENEVPDGIQ 486
           GA+VIVEG EKH PL EGS+LWITE RSPLG++DEIFGPVKNPYY+VRYNS++EVP GI 
Sbjct: 252 GAKVIVEGAEKHKPLTEGSILWITESRSPLGLIDEIFGPVKNPYYVVRYNSDSEVPAGIN 311

Query: 485 QGTLISFVPEFVNHILNNGNLYKKGYDAXXXXXXXXXXXXXXXXXXXXXEYKRLQKLSKR 306
           +GT ISFVP+F NHILN  NLYKKGYDA                     E+KR  K+ KR
Sbjct: 312 EGTFISFVPQFANHILNERNLYKKGYDA-SGENDEEVSDVEFSDDEEEAEHKRTLKMIKR 370

Query: 305 GPN 297
           G N
Sbjct: 371 GTN 373


>ref|NP_171852.2| nuclear assembly factor 1 [Arabidopsis thaliana]
           gi|9280664|gb|AAF86533.1|AC002560_26 F21B7.15
           [Arabidopsis thaliana] gi|332189462|gb|AEE27583.1|
           nuclear assembly factor 1 [Arabidopsis thaliana]
          Length = 801

 Score =  213 bits (541), Expect = 7e-53
 Identities = 111/177 (62%), Positives = 128/177 (72%), Gaps = 3/177 (1%)
 Frame = -2

Query: 824 EKVAWS-DEDEEFG--KAGPIMSANEIKILPPVPPVAVTLEPCHETLPVGAVLSIVGAQV 654
           E VAWS DED++ G     PI S NE+K LPPVPPV VTLEP H TLPVG VLS++ AQV
Sbjct: 336 EMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVPPVDVTLEPHHATLPVGVVLSVMSAQV 395

Query: 653 IVEGMEKHNPLNEGSVLWITEKRSPLGIVDEIFGPVKNPYYIVRYNSENEVPDGIQQGTL 474
           IVEGMEKH+PL EGS+LWITEKR+PLG+VDEIFGPVK PYYIVR+NSE+EVP+G+ QGT 
Sbjct: 396 IVEGMEKHSPLTEGSILWITEKRTPLGLVDEIFGPVKCPYYIVRFNSESEVPEGVCQGTP 455

Query: 473 ISFVPEFVNHILNNGNLYKKGYDAXXXXXXXXXXXXXXXXXXXXXEYKRLQKLSKRG 303
           +SFV +F  HILN   L KKGYDA                     EY+R+QKL KRG
Sbjct: 456 VSFVADFAQHILNIKELQKKGYDASGDNDEEIPDELEFSDDEKEAEYRRMQKLEKRG 512


>gb|AAO64742.1| At1g03530 [Arabidopsis thaliana] gi|110735969|dbj|BAE99959.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|225897866|dbj|BAH30265.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 801

 Score =  213 bits (541), Expect = 7e-53
 Identities = 111/177 (62%), Positives = 128/177 (72%), Gaps = 3/177 (1%)
 Frame = -2

Query: 824 EKVAWS-DEDEEFG--KAGPIMSANEIKILPPVPPVAVTLEPCHETLPVGAVLSIVGAQV 654
           E VAWS DED++ G     PI S NE+K LPPVPPV VTLEP H TLPVG VLS++ AQV
Sbjct: 336 EMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVPPVDVTLEPHHATLPVGVVLSVMSAQV 395

Query: 653 IVEGMEKHNPLNEGSVLWITEKRSPLGIVDEIFGPVKNPYYIVRYNSENEVPDGIQQGTL 474
           IVEGMEKH+PL EGS+LWITEKR+PLG+VDEIFGPVK PYYIVR+NSE+EVP+G+ QGT 
Sbjct: 396 IVEGMEKHSPLTEGSILWITEKRTPLGLVDEIFGPVKCPYYIVRFNSESEVPEGVCQGTP 455

Query: 473 ISFVPEFVNHILNNGNLYKKGYDAXXXXXXXXXXXXXXXXXXXXXEYKRLQKLSKRG 303
           +SFV +F  HILN   L KKGYDA                     EY+R+QKL KRG
Sbjct: 456 VSFVADFAQHILNIKELQKKGYDASGDNDEEIPDELEFSDDEKEAEYRRMQKLEKRG 512


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