BLASTX nr result

ID: Bupleurum21_contig00014714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014714
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    82   8e-14

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
 Frame = +1

Query: 7    FWTMSIPRDCSWIIRNILKIRGVAMQHITYEVSQLSDFLFWHDPWVDQSPLSCRFPSCLV 186
            FWT+  P++CSW    ILK+R +A   + Y +        W D W   SPL+  +    +
Sbjct: 1077 FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 1136

Query: 187  SIIESTSMAKVSTLLFDDQWHIPSDHEMAIELRHLINGVPLHNANSIKWEGKRCV----- 351
                    AKV+ L+ + +W  P+    AI    +I  +P  N+N    +    V     
Sbjct: 1137 YDSGMAKNAKVNVLIQNSEWKTPTTQ--AIGWHPIIEAIP-SNSNPKMGQKDEIVWLDSP 1193

Query: 352  NRNYI----WETIRIHGSIMPWAGTVRYSFSIHRCSFILWLLMQGRLPTKDRLCSFGLQA 519
            N  ++    WE +R H  ++ W   V +  ++ R SF+LW+ +Q +L T+D+L  FG+  
Sbjct: 1194 NHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHG 1253

Query: 520  NQTCVLCNRANETADH 567
               C LC R NE  +H
Sbjct: 1254 PNRCSLCLRNNEDHNH 1269


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
 Frame = +1

Query: 7   FWTMSIPRDCSWIIRNILKIRGVAMQHITYEVSQLSDFLFWHDPWVDQSPLSCRFPSCLV 186
           FWT+  P++CSW    ILK+R +A   + Y +        W D W   SPL+  +    +
Sbjct: 22  FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 81

Query: 187 SIIESTSMAKVSTLLFDDQWHIPSDHEMAIELRHLINGVPLHN------ANSIKW--EGK 342
                   AKV+ L+ + +W  P+    AI    +I  +P ++       + I W     
Sbjct: 82  YDSGMAKNAKVNVLIQNSEWKTPTTQ--AIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPN 139

Query: 343 RCVNRNYIWETIRIHGSIMPWAGTVRYSFSIHRCSFILWLLMQGRLPTKDRLCSFGLQAN 522
              +    WE +R H  ++ W   V +  ++ R SF+LW+++Q +L T+D+L  FG+   
Sbjct: 140 HRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGP 199

Query: 523 QTCVLCNRANETADH 567
             C LC R NE  +H
Sbjct: 200 NRCSLCLRNNEDHNH 214


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 9/196 (4%)
 Frame = +1

Query: 7   FWTMSIPRDCSWIIRNILKIRGVAMQHITYEVSQLSDFLFWHDPWVDQSPLSCRFPSCLV 186
           FWT+  P++CSW    ILK+R +A   + Y +        W D W   SPL+  +    +
Sbjct: 204 FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 263

Query: 187 SIIESTSMAKVSTLLFDDQWHIPSDHEMAIELRHLINGVPLHNANSIKWEGKRCV----- 351
                   AKV+ L+ + +W  P+    AI    +I  +P  N+N    +    V     
Sbjct: 264 YDSGMAKNAKVNVLIQNSEWKTPTTQ--AIGWHPIIEAIP-SNSNPKMGQKDELVWLDSP 320

Query: 352 NRNY----IWETIRIHGSIMPWAGTVRYSFSIHRCSFILWLLMQGRLPTKDRLCSFGLQA 519
           N  +     WE +R H  ++ W   V +  ++ R SF+LW+ +Q +L T+D+L  FG+  
Sbjct: 321 NHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHG 380

Query: 520 NQTCVLCNRANETADH 567
              C LC R NE  +H
Sbjct: 381 PNRCSLCLRNNEDHNH 396


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
 Frame = +1

Query: 7    FWTMSIPRDCSWIIRNILKIRGVAMQHITYEVSQLSDFLFWHDPWVDQSPLSCRFPSCLV 186
            FWT+  P++CS     ILK+R +A   + Y +        W D W   SPL+  +    +
Sbjct: 737  FWTIKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 796

Query: 187  SIIESTSMAKVSTLLFDDQWHIPSDHEMAIELRHLINGVPLHN------ANSIKW--EGK 342
                    AKV+ L+ + +W  P+    AI    +I  +P ++       + I W     
Sbjct: 797  YDSGMAKNAKVNVLIQNSEWKTPTTQ--AIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPN 854

Query: 343  RCVNRNYIWETIRIHGSIMPWAGTVRYSFSIHRCSFILWLLMQGRLPTKDRLCSFGLQAN 522
               +    WE +R H  ++ W   V +  ++ R SF+LW+++Q +L T+D+L  FG+   
Sbjct: 855  HRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGP 914

Query: 523  QTCVLCNRANETADH 567
              C LC R NE  +H
Sbjct: 915  NRCSLCLRNNEDHNH 929


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
 Frame = +1

Query: 7   FWTMSIPRDCSWIIRNILKIRGVAMQHITYEVSQLSDFLFWHDPWVDQSPLSCRFPSCLV 186
           FWT++     SWI R + K+R +A   +  E+       FW D W  Q PL     +   
Sbjct: 10  FWTLNPYSSGSWIWRKLCKLRPLARPFLVCEIGSGETASFWQDNWTGQGPLIDLTGTNGP 69

Query: 187 SIIESTSMAKVSTLLFDDQWHIPSDHEMAIELRHLINGVPLHNA-------NSIKWEGKR 345
             +     A V   L  D W + S       +  L + +P   +       +  KW+   
Sbjct: 70  RSVGMPLNAVVRDALRGDNWWLSSSRSRNPSIALLKSVLPSSESMIECQHDDVYKWKPDH 129

Query: 346 CVNRNYI-----WETIRIHGSIMPWAGTVRYSFSIHRCSFILWLLMQGRLPTKDRLCSFG 510
               N       W  +   G ++PW  +V +   I + +FI W+    RL T+DRL  +G
Sbjct: 130 HAPSNIFSASKTWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWG 189

Query: 511 LQANQTCVLCNRANETADH 567
           L     CVLCN  +ET DH
Sbjct: 190 LNIPTVCVLCNVVDETHDH 208


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