BLASTX nr result
ID: Bupleurum21_contig00014707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00014707
(1639 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote... 610 e-172
emb|CBI18968.3| unnamed protein product [Vitis vinifera] 604 e-170
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354... 604 e-170
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote... 603 e-170
emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana] 548 e-153
>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
vinifera]
Length = 962
Score = 610 bits (1573), Expect = e-172
Identities = 322/554 (58%), Positives = 385/554 (69%), Gaps = 10/554 (1%)
Frame = +3
Query: 3 MSRNLVSPEIFDTLHDALKQNGAEVFLCCDPSRNGPNDYHVIYL--HEKFEDLRTKGCNL 176
MSRNLV PE+FD+LHDALK NGA+VFLCCDPSRNGPNDYH+I HEKFEDLR KGCNL
Sbjct: 14 MSRNLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFEDLRAKGCNL 73
Query: 177 LGPECVLSCAKEHRLLPKQGYTCCLALDGVKVLASGFDVDEKIQISKLVTAMGGVMHMKA 356
LGP+CVLSCAKEHR LPKQG+TCCLA+DGVKVLASGFD+DEK++I KLVTAMGGV+H KA
Sbjct: 74 LGPQCVLSCAKEHRPLPKQGFTCCLAMDGVKVLASGFDMDEKVKIGKLVTAMGGVLHTKA 133
Query: 357 SLDVSFVIVKSVLSAKYKWAVNTLKKPVVTISWLYQCWKEHRVVPQDSYRVLPFTGLIIC 536
S DVSFVIVK+VL+AKYKWA N LKKP+VTI+WL+QCW EHRVVPQ+SYRVLPF+GL IC
Sbjct: 134 SSDVSFVIVKNVLAAKYKWASNILKKPIVTINWLHQCWTEHRVVPQESYRVLPFSGLTIC 193
Query: 537 VTKVPADERKEMEKLVNLNGGKYSAELHEKCTHLVCDAPEGDKFKVAKRGGHIQIVTRKW 716
VTK+PA GDK+KVA+R GHI IVTRKW
Sbjct: 194 VTKIPA----------------------------------GDKYKVARRWGHIHIVTRKW 219
Query: 717 FDQSVSRRACLNEESYPVQGSCTSNSIS-RTSLKVQHNQDKVGKNSILSLSSLSTDENSR 893
FDQS++R+AC+NEESY VQG S+ S RT L +QDK N + SSL+ D N +
Sbjct: 220 FDQSIARKACVNEESYTVQGGTASSINSVRTHLTASQSQDKSNVNFQSASSSLAADSNLQ 279
Query: 894 ASKYDGLVDLDLEATISQNMSLKFPDDPINLRKEDNGAPFMHPEGDANCDGCVADDSQND 1073
A G+ D DLEAT+SQN F D PI +++ + P M + + DG VADDSQ +
Sbjct: 280 AVPCSGIGDPDLEATLSQNTCSTFLDAPIFIKEGETREPAMQDKDENKLDGLVADDSQTE 339
Query: 1074 DNDLYLSDCRIFLVGFDVSEMRKLVNMVREGGGSRYMALKEKLTHIVVGTPSEIEKKEAR 1253
D+DLYLSDCRI LVGF+ SEMRKLVNMVR GGGSRYM+ EKLTHIVVGTPSE+EKK R
Sbjct: 340 DSDLYLSDCRILLVGFEASEMRKLVNMVRRGGGSRYMSFNEKLTHIVVGTPSEVEKKVVR 399
Query: 1254 GYAAAGVISVVKKAWLEECDREKKEIPVLRRHIGFDLLIPKDLVTSNKRHAKIETVVKEG 1433
G AA GVISVV+ WLE+CD EKKE+ VLRRHI DLL+PKD NK + ++ +G
Sbjct: 400 GLAATGVISVVRTIWLEDCDHEKKEVSVLRRHIAHDLLLPKDSACLNK--GAVVGIINQG 457
Query: 1434 N-----YILHDDQIQQHMNPGLAISAEKRKE--PEIIMNKDSSAGTNCRYSNEYQPSACI 1592
+ DQ MN G + EK K+ PE+ +N D+ R + + PS
Sbjct: 458 KSSTVASSMPADQSLGSMNTGSRMLLEKSKQRIPEVNVNWDNFLEETARSAQQSMPSIND 517
Query: 1593 ASDMSYEKIQSGSN 1634
+ +K++ SN
Sbjct: 518 KYKKTQQKMEQYSN 531
>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
Length = 952
Score = 604 bits (1558), Expect = e-170
Identities = 320/557 (57%), Positives = 384/557 (68%), Gaps = 13/557 (2%)
Frame = +3
Query: 3 MSRNLVSPEIFDTLHDALKQNGAEVFLCCDPSRNGPNDYHVIYL--HEKFEDLRTKGCNL 176
MSRNLV PE+FD+LHDALK NGA+VFLCCDPSRNGPNDYH+I HEKFEDLR KGCNL
Sbjct: 14 MSRNLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFEDLRAKGCNL 73
Query: 177 LGPECVLSCAKEHRLLPKQGYTCCLALDGVKVLASGFDVDEKIQISKLVTAMGGVMHMKA 356
LGP+CVLSCAKEHR LPKQG+TCCLA+DGVKVLASGFD+DEK++I KLVTAMGGV+H KA
Sbjct: 74 LGPQCVLSCAKEHRPLPKQGFTCCLAMDGVKVLASGFDMDEKVKIGKLVTAMGGVLHTKA 133
Query: 357 SLDVSFVIVKSVLSAKY-KWAVNTLKKPVVTISWLYQCWKEHRVVPQDSYRVLPFTGLII 533
S DV+ + +L + +WA N LKKP+VTI+WL+QCW EHRVVPQ+SYRVLPF+GL I
Sbjct: 134 SSDVNLISCLILLLYVFLQWASNILKKPIVTINWLHQCWTEHRVVPQESYRVLPFSGLTI 193
Query: 534 CVTKVPADERKEMEKLVNLNGGKYSAELHEKCTHLVCD--APEGDKFKVAKRGGHIQIVT 707
CVTK+PADERKEME L+ NGGKYSA+L CTHL+ D +PEGDK+KVA+R GHI IVT
Sbjct: 194 CVTKIPADERKEMEILIKQNGGKYSADLTRNCTHLITDISSPEGDKYKVARRWGHIHIVT 253
Query: 708 RKWFDQSVSRRACLNEESYPVQGSCTSNSIS-RTSLKVQHNQDKVGKNSILSLSSLSTDE 884
RKWFDQS++R+AC+NEESY VQG S+ S RT L +QDK N + SSL+ D
Sbjct: 254 RKWFDQSIARKACVNEESYTVQGGTASSINSVRTHLTASQSQDKSNVNFQSASSSLAADS 313
Query: 885 NSRASKYDGLVDLDLEATISQNMSLKFPDDPINLRKEDNGAPFMHPEGDANCDGCVADDS 1064
N +A P M + + DG VADDS
Sbjct: 314 NLQA-------------------------------------PAMQDKDENKLDGLVADDS 336
Query: 1065 QNDDNDLYLSDCRIFLVGFDVSEMRKLVNMVREGGGSRYMALKEKLTHIVVGTPSEIEKK 1244
Q +D+DLYLSDCRI LVGF+ SEMRKLVNMVR GGGSRYM+ EKLTHIVVGTPSE+EKK
Sbjct: 337 QTEDSDLYLSDCRILLVGFEASEMRKLVNMVRRGGGSRYMSFNEKLTHIVVGTPSEVEKK 396
Query: 1245 EARGYAAAGVISVVKKAWLEECDREKKEIPVLRRHIGFDLLIPKDLVTSNKRHAKIETVV 1424
RG AA GVISVV+ WLE+CD EKKE+ VLRRHI DLL+PKD NK + ++
Sbjct: 397 VVRGLAATGVISVVRTIWLEDCDHEKKEVSVLRRHIAHDLLLPKDSACLNK--GAVVGII 454
Query: 1425 KEGN-----YILHDDQIQQHMNPGLAISAEKRKE--PEIIMNKDSSAGTNCRYSNEYQPS 1583
+G + DQ MN G + EK K+ PE+ +N D+ R + + PS
Sbjct: 455 NQGKSSTVASSMPADQSLGSMNTGSRMLLEKSKQRIPEVNVNWDNFLEETARSAQQSMPS 514
Query: 1584 ACIASDMSYEKIQSGSN 1634
+ +K++ SN
Sbjct: 515 INDKYKKTQQKMEQYSN 531
>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
topbp1, putative [Ricinus communis]
Length = 950
Score = 604 bits (1558), Expect = e-170
Identities = 312/556 (56%), Positives = 389/556 (69%), Gaps = 12/556 (2%)
Frame = +3
Query: 3 MSRNLVSPEIFDTLHDALKQNGAEVFLCCDPSRNGPNDYHVIYL--HEKFEDLRTKGCNL 176
MSRNLV PE+FD L DAL+ NGA+V LCCDPSRNGPNDYH+I HEKFEDLR KGCNL
Sbjct: 14 MSRNLVPPEVFDALLDALRLNGAQVLLCCDPSRNGPNDYHIISSPDHEKFEDLRAKGCNL 73
Query: 177 LGPECVLSCAKEHRLLPKQGYTCCLALDGVKVLASGFDVDEKIQISKLVTAMGGVMHMKA 356
LGP+CVLSCAKEHR LPKQG+TCCLA+DGVKVLASGFD+DEK++I KLVTAMGG +H K
Sbjct: 74 LGPQCVLSCAKEHRTLPKQGFTCCLAMDGVKVLASGFDIDEKVKIEKLVTAMGGQLHTKT 133
Query: 357 SLDVSFVIVKSVLSAKYKWAVNTLKKPVVTISWLYQCWKEHRVVPQDSYRVLPFTGLIIC 536
SLDVSFVIVK+VL+AKYKWA+N LKKPVVT +WLYQCW EHRVVPQ+SYRVLPF+GL+IC
Sbjct: 134 SLDVSFVIVKNVLAAKYKWALNILKKPVVTCNWLYQCWNEHRVVPQESYRVLPFSGLMIC 193
Query: 537 VTKVPADERKEMEKLVNLNGGKYSAELHEKCTHLVCDAPEGDKFKVAKRGGHIQIVTRKW 716
VT++PA GDK+KVA+R GHI IV RKW
Sbjct: 194 VTRIPA----------------------------------GDKYKVAQRWGHIHIVMRKW 219
Query: 717 FDQSVSRRACLNEESYPVQGSCTSNSISRTSLKVQHNQDKVGKNSILSLSSLSTDENSRA 896
FDQSV+RRACLNEESYPVQG +++SI ++S QH + NSI S+ + N
Sbjct: 220 FDQSVARRACLNEESYPVQGG-SASSIKKSSSMAQH----IIGNSISVPSAAPAESNLPG 274
Query: 897 SKYDGLVDLDLEATISQNMSLKFPDDPINLRKEDNGAPFMHPEGDANCDGCVADDSQNDD 1076
G+ DLDLE T+SQNMS F D P+++++ DN P +HP + N DGCVA+DSQ++D
Sbjct: 275 LPGAGVSDLDLEPTLSQNMSSMFSDPPVSVKEWDNEVPAVHPTNETNLDGCVANDSQSED 334
Query: 1077 NDLYLSDCRIFLVGFDVSEMRKLVNMVREGGGSRYMALKEKLTHIVVGTPSEIEKKEARG 1256
+DLYLS+CRI LVGF+ SE+RKLVNMVR GGGSRY++ +KLTHIVVG P+E+EKKE RG
Sbjct: 335 SDLYLSECRISLVGFEASELRKLVNMVRRGGGSRYLSFNDKLTHIVVGAPTEVEKKELRG 394
Query: 1257 YAAAGVISVVKKAWLEECDREKKEIPVLRRHIGFDLLIPKDLVTSNK------RHAKIET 1418
AA GVI VV+ WLE+CDR+KKE+PV+R+H+ +DLL+PKD ++S K K+ +
Sbjct: 395 LAALGVIDVVRPTWLEDCDRQKKEVPVIRQHLAYDLLLPKDSMSSIKGAVVGMNQGKVAS 454
Query: 1419 VVKEGNYILHDDQIQQHMNPG----LAISAEKRKEPEIIMNKDSSAGTNCRYSNEYQPSA 1586
+H DQ+ N G ++ + ++PEI M++ S R S + S
Sbjct: 455 AFSS----IHSDQLLGSANFGNGKTSSLENSREEKPEIYMSRSISLEATVRQSQQNIFSI 510
Query: 1587 CIASDMSYEKIQSGSN 1634
S +K Q S+
Sbjct: 511 VNDEKKSGKKTQPNSS 526
>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
Length = 970
Score = 603 bits (1554), Expect = e-170
Identities = 303/479 (63%), Positives = 375/479 (78%), Gaps = 7/479 (1%)
Frame = +3
Query: 3 MSRNLVSPEIFDTLHDALKQNGAEVFLCCDPSRNGPNDYHVIYL--HEKFEDLRTKGCNL 176
MSRNLV PE+FD LHDA+K NGA++ LCCDPSRNGPNDYH+I HEKF+DL++KGC L
Sbjct: 14 MSRNLVPPEVFDKLHDAVKDNGAQIHLCCDPSRNGPNDYHIISSSKHEKFDDLKSKGCKL 73
Query: 177 LGPECVLSCAKEHRLLPKQGYTCCLALDGVKVLASGFDVDEKIQISKLVTAMGGVMHMKA 356
LGP CVLSCAK R LPKQG+TCCLA+DGVKVLASGFD DEK++I +LV MGGV+H KA
Sbjct: 74 LGPICVLSCAKGGRPLPKQGFTCCLAMDGVKVLASGFDTDEKVKIEELVAEMGGVLHTKA 133
Query: 357 SLDVSFVIVKSVLSAKYKWAVNTLKKPVVTISWLYQCWKEHRVVPQDSYRVLPFTGLIIC 536
SLD++FV+VK+VL+AKYKWA+N LKKP+VT WL QC EHRVVPQ+SY+VLPF+GL IC
Sbjct: 134 SLDLNFVVVKNVLAAKYKWALNILKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLKIC 193
Query: 537 VTKVPADERKEMEKLVNLNGGKYSAELHEKCTHLVCDAPEGDKFKVAKRGGHIQIVTRKW 716
VT +PAD RKEMEKL+ NGGKYSAEL +KCTHL+ +APEGDK+KVAKR GHI IVTRKW
Sbjct: 194 VTGIPADNRKEMEKLILQNGGKYSAELTKKCTHLISEAPEGDKYKVAKRWGHIHIVTRKW 253
Query: 717 FDQSVSRRACLNEESYPVQ-GSCTSNSISRTSLKVQHNQDKVGKNSILSLSSLSTDENSR 893
FDQS++R+ACLNEE + VQ GS +S+ ++R L +QH+Q+K + SS +TD N +
Sbjct: 254 FDQSIARKACLNEELFAVQHGSVSSHKVTR-DLTMQHSQEKDFGKLHSAASSGATDSNVQ 312
Query: 894 ASKYDGLVDLDLEATISQNMSLKFPDDPINLRKEDNGAPFMHPEGDANCDGCVADDSQND 1073
+D DLEAT S++MS + P+ ++ D+ + + N DG VA+DS++D
Sbjct: 313 VFSCAEFMDRDLEATQSEHMS-SVSNVPLFAKEADSEPLPLQTCSELNFDGAVANDSESD 371
Query: 1074 DNDLYLSDCRIFLVGFDVSEMRKLVNMVREGGGSRYMALKEKLTHIVVGTPSEIEKKEAR 1253
DNDLYLS+CRI LVGF+ EMRKLVNMVR+GGGSRYM+ +KLTHIV+G P+E+EKK+ R
Sbjct: 372 DNDLYLSECRILLVGFEACEMRKLVNMVRKGGGSRYMSFNDKLTHIVIGNPTEMEKKDVR 431
Query: 1254 GYAAAGVISVVKKAWLEECDREKKEIPVLRRHIGFDLLIP--KDLVTSNKR--HAKIET 1418
AA GVI VVK AWLE+CDREKK++PVLRRHI +DLL P K VT + HAKI +
Sbjct: 432 SLAALGVIYVVKTAWLEDCDREKKQVPVLRRHIAYDLLYPKAKGAVTGSMSMDHAKISS 490
>emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
Length = 972
Score = 548 bits (1412), Expect = e-153
Identities = 278/464 (59%), Positives = 351/464 (75%), Gaps = 5/464 (1%)
Frame = +3
Query: 3 MSRNLVSPEIFDTLHDALKQNGAEVFLCCDPSRNGPNDYHVIYL--HEKFEDLRTKGCNL 176
MSRNLV PE+FDTL DA K NGAE+FLCCDPSR+GP+D+HVI HEKF+DL+ KGCNL
Sbjct: 14 MSRNLVPPEVFDTLLDAFKLNGAEIFLCCDPSRSGPSDFHVIASPDHEKFKDLKAKGCNL 73
Query: 177 LGPECVLSCAKEHRLLPKQGYTCCLALDGVKVLASGFDVDEKIQISKLVTAMGGVMHMKA 356
+GP+C L CAKE R LP++G+TCCLA+DG+KVLASGF VDEK++I +LVT+MGGV+ +A
Sbjct: 74 IGPQCALFCAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKVKIKELVTSMGGVLLSRA 133
Query: 357 SLDVSFVIVKSVLSAKYKWAVNTLKKPVVTISWLYQCWKEHRVVPQDSYRVLPFTGLIIC 536
S DV+FVIVK+VL+AKYKWA+N KKP+VT++WL++CW EHRVVPQ+ Y++ PF+GL IC
Sbjct: 134 SSDVNFVIVKNVLAAKYKWALN--KKPIVTLNWLHRCWNEHRVVPQEPYKIPPFSGLTIC 191
Query: 537 VTKVPADERKEMEKLVNLNGGKYSAELHEKCTHLVCDAPEGDKFKVAKRGGHIQIVTRKW 716
VT++PADERK MEK+++ GG YSAEL + CTHL+ DA EGDK+KVA++ GHIQIVTRKW
Sbjct: 192 VTRIPADERKGMEKVISEYGGSYSAELTKSCTHLIADAAEGDKYKVARKWGHIQIVTRKW 251
Query: 717 FDQSVSRRACLNEESYPVQGSCTSNSISRTSLKVQHNQDKVGKNSILSLS-SLSTDENSR 893
F QS+ ++ CLNEESYPV GS R L V + +K + S + S + SR
Sbjct: 252 FQQSIDKKVCLNEESYPVLGSIPLTRGVR-DLGVHNGLEKFPSAATASAADSYVSCAQSR 310
Query: 894 ASKYDGLVDLDLEATISQNMSLKFPD--DPINLRKEDNGAPFMHPEGDANCDGCVADDSQ 1067
D D+EA+ SQN+ FP +P KE G P P+ + N DGC A DS+
Sbjct: 311 --------DSDIEASASQNV---FPTSMNPSTDVKEPGGGPTARPQ-EQNIDGCTARDSE 358
Query: 1068 NDDNDLYLSDCRIFLVGFDVSEMRKLVNMVREGGGSRYMALKEKLTHIVVGTPSEIEKKE 1247
++DNDLYLSDCRIFL+GF+ SEMRKL +VR GGGSRYM L E++THIVVGTPSE EK+E
Sbjct: 359 SEDNDLYLSDCRIFLLGFEASEMRKLAKLVRRGGGSRYMLLNERMTHIVVGTPSESEKRE 418
Query: 1248 ARGYAAAGVISVVKKAWLEECDREKKEIPVLRRHIGFDLLIPKD 1379
AR AA+GVI VV +WLE+CDREKKEIPV + L++P+D
Sbjct: 419 ARSVAASGVIQVVIPSWLEDCDREKKEIPVHNIYTANHLILPRD 462