BLASTX nr result

ID: Bupleurum21_contig00014688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014688
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533310.1| PREDICTED: nucleolar protein 10-like [Glycin...    83   7e-26
ref|XP_003528973.1| PREDICTED: nucleolar protein 10-like [Glycin...    82   9e-26
ref|XP_002267245.1| PREDICTED: nucleolar protein 10 [Vitis vinif...    82   5e-25
ref|XP_003596489.1| Nucleolar protein [Medicago truncatula] gi|3...    75   2e-24
emb|CAN63199.1| hypothetical protein VITISV_034312 [Vitis vinifera]    82   2e-24

>ref|XP_003533310.1| PREDICTED: nucleolar protein 10-like [Glycine max]
          Length = 712

 Score = 82.8 bits (203), Expect(2) = 7e-26
 Identities = 41/53 (77%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = -3

Query: 158 VECFDMRTRYSVGRINAVGPAGDMEQ-VTALQFDGDGGYHMAVGSSAGKVLLY 3
           VECFDMR R SVGRI+AVGP+GD++Q VTAL+FD DGG+ MAVGSSAGKVL+Y
Sbjct: 228 VECFDMRVRSSVGRIDAVGPSGDVDQEVTALEFDEDGGFLMAVGSSAGKVLIY 280



 Score = 61.2 bits (147), Expect(2) = 7e-26
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 354 GRFLSSLNTQSPAVNVVCRSKVHGLVASGGEDG 256
           GRFLSSLNTQSPA+NVV RSK+HGLVA GGEDG
Sbjct: 194 GRFLSSLNTQSPALNVVSRSKLHGLVACGGEDG 226


>ref|XP_003528973.1| PREDICTED: nucleolar protein 10-like [Glycine max]
          Length = 692

 Score = 81.6 bits (200), Expect(2) = 9e-26
 Identities = 40/53 (75%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = -3

Query: 158 VECFDMRTRYSVGRINAVGPAGDMEQ-VTALQFDGDGGYHMAVGSSAGKVLLY 3
           VECFDMR R SVGRI+AVGP+GD++Q VTAL+FD DGG+ +AVGSSAGKVL+Y
Sbjct: 208 VECFDMRVRSSVGRIDAVGPSGDVDQEVTALEFDEDGGFLLAVGSSAGKVLIY 260



 Score = 62.0 bits (149), Expect(2) = 9e-26
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -2

Query: 354 GRFLSSLNTQSPAVNVVCRSKVHGLVASGGEDG 256
           GRFLSSLNTQSPA+NVV RSK+HGLVA GGEDG
Sbjct: 174 GRFLSSLNTQSPALNVVSRSKIHGLVACGGEDG 206


>ref|XP_002267245.1| PREDICTED: nucleolar protein 10 [Vitis vinifera]
           gi|297739929|emb|CBI30111.3| unnamed protein product
           [Vitis vinifera]
          Length = 701

 Score = 82.0 bits (201), Expect(2) = 5e-25
 Identities = 41/53 (77%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
 Frame = -3

Query: 158 VECFDMRTRYSVGRINAVGPAGDMEQ-VTALQFDGDGGYHMAVGSSAGKVLLY 3
           VECFDMRTR SVGRINAV  AGD++Q VTAL+FDGD G+ MAVGSS+GKVL+Y
Sbjct: 207 VECFDMRTRSSVGRINAVAAAGDVDQEVTALEFDGDAGFLMAVGSSSGKVLIY 259



 Score = 59.3 bits (142), Expect(2) = 5e-25
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -2

Query: 354 GRFLSSLNTQSPAVNVVCRSKVHGLVASGGEDG 256
           GRFLSSLNTQSPA+NVV RS +HGLVA GGEDG
Sbjct: 173 GRFLSSLNTQSPALNVVSRSNLHGLVACGGEDG 205


>ref|XP_003596489.1| Nucleolar protein [Medicago truncatula] gi|355485537|gb|AES66740.1|
           Nucleolar protein [Medicago truncatula]
          Length = 808

 Score = 75.5 bits (184), Expect(2) = 2e-24
 Identities = 38/50 (76%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
 Frame = -3

Query: 158 VECFDMRTRYSVGRINAVGPAGDMEQ-VTALQFDGDGGYHMAVGSSAGKV 12
           VECFD R R SVGRI+AVGP+GD++Q VTAL+FDGDG + MAVGSSAGKV
Sbjct: 207 VECFDPRVRSSVGRIDAVGPSGDVDQEVTALEFDGDGDFLMAVGSSAGKV 256



 Score = 63.9 bits (154), Expect(2) = 2e-24
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -2

Query: 354 GRFLSSLNTQSPAVNVVCRSKVHGLVASGGEDG 256
           GRFLSSL TQSPA+NVVCRSKVHGLVA GGEDG
Sbjct: 173 GRFLSSLTTQSPALNVVCRSKVHGLVACGGEDG 205


>emb|CAN63199.1| hypothetical protein VITISV_034312 [Vitis vinifera]
          Length = 652

 Score = 82.0 bits (201), Expect(2) = 2e-24
 Identities = 41/53 (77%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
 Frame = -3

Query: 158 VECFDMRTRYSVGRINAVGPAGDMEQ-VTALQFDGDGGYHMAVGSSAGKVLLY 3
           VECFDMRTR SVGRINAV  AGD++Q VTAL+FDGD G+ MAVGSS+GKVL+Y
Sbjct: 136 VECFDMRTRSSVGRINAVAXAGDVDQEVTALEFDGDAGFLMAVGSSSGKVLIY 188



 Score = 57.4 bits (137), Expect(2) = 2e-24
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 354 GRFLSSLNTQSPAVNVVCRSKVHGLVASGGEDG 256
           G FLSSLNTQSPA+NVV RS +HGLVA GGEDG
Sbjct: 102 GHFLSSLNTQSPALNVVSRSNLHGLVACGGEDG 134


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