BLASTX nr result

ID: Bupleurum21_contig00014649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014649
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001698656.1| importin alpha [Chlamydomonas reinhardtii] g...    72   6e-11
gb|EME28891.1| importin alpha [Galdieria sulphuraria]                  71   1e-10
ref|XP_002872853.1| ATIMPALPHA3/MOS6 [Arabidopsis lyrata subsp. ...    70   2e-10
gb|ABM05487.1| Impa1 [Nicotiana benthamiana]                           70   2e-10
pdb|4B8J|A Chain A, Rimp_alpha1a                                       70   2e-10

>ref|XP_001698656.1| importin alpha [Chlamydomonas reinhardtii]
           gi|158273550|gb|EDO99338.1| importin alpha
           [Chlamydomonas reinhardtii]
          Length = 555

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/97 (40%), Positives = 60/97 (61%)
 Frame = -1

Query: 295 IAVITALGAIVRWGSRTDIEVIIEKKALMYLNRCLYDQMDMWFKKNSCWIISNIIAKTEN 116
           +  +  +G IV  G+    +VII   AL  L+  L        KK +CW +SNI A T++
Sbjct: 303 VPALRTVGNIVT-GNDMQTQVIINCGALACLHNLLMTNHKKSIKKEACWTVSNITAGTKD 361

Query: 115 HIEAVVNSGLLDSLVGIIENCKFLNVKKEAAWAIANA 5
            I+AV++SGL+  L+G++   +F ++KKEAAWAI+NA
Sbjct: 362 QIQAVIDSGLIPPLIGLLATAEF-DIKKEAAWAISNA 397


>gb|EME28891.1| importin alpha [Galdieria sulphuraria]
          Length = 536

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
 Frame = -1

Query: 301 QSIAVIT----ALGAIVRWGSRTDIEVIIEKKALMYLNRCLYDQMDMWFKKNSCWIISNI 134
           QSIAV T     +G IV  G  T  +V+I   AL  LN  L        +K +CW +SNI
Sbjct: 303 QSIAVQTPSLRTIGNIVT-GDDTQTQVVINCDALPCLNSLLGSHKKS-IRKEACWTVSNI 360

Query: 133 IAKTENHIEAVVNSGLLDSLVGIIENCKFLNVKKEAAWAIANA 5
            A T+  I+AV+N+ ++  +V +++N +F +VKKEAAWAI+NA
Sbjct: 361 TAGTQEQIQAVINANIIPKVVDLLQNAEF-DVKKEAAWAISNA 402


>ref|XP_002872853.1| ATIMPALPHA3/MOS6 [Arabidopsis lyrata subsp. lyrata]
           gi|297318690|gb|EFH49112.1| ATIMPALPHA3/MOS6
           [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/97 (38%), Positives = 59/97 (60%)
 Frame = -1

Query: 295 IAVITALGAIVRWGSRTDIEVIIEKKALMYLNRCLYDQMDMWFKKNSCWIISNIIAKTEN 116
           I  +  +G IV  G     +++++ +AL +L   L +      KK +CW ISNI A   N
Sbjct: 308 IPALRTIGNIVT-GDDLQTQMVLDHQALPFLLNLLKNTYKKSIKKEACWTISNITAGNAN 366

Query: 115 HIEAVVNSGLLDSLVGIIENCKFLNVKKEAAWAIANA 5
            I+AV+ +G++ SLV ++++ +F  VKKEAAW I+NA
Sbjct: 367 QIQAVIEAGIIQSLVWVLQSAEF-EVKKEAAWGISNA 402


>gb|ABM05487.1| Impa1 [Nicotiana benthamiana]
          Length = 532

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/97 (41%), Positives = 57/97 (58%)
 Frame = -1

Query: 295 IAVITALGAIVRWGSRTDIEVIIEKKALMYLNRCLYDQMDMWFKKNSCWIISNIIAKTEN 116
           I  +  +G IV  G     +VII+  AL  L   L        KK +CW ISNI A + N
Sbjct: 304 IPALRTVGNIVT-GDDIQTQVIIDHHALPCLLNLLTQNYKKSIKKEACWTISNITAGSRN 362

Query: 115 HIEAVVNSGLLDSLVGIIENCKFLNVKKEAAWAIANA 5
            I+AV+ +G++  LV +++N +F  +KKEAAWAI+NA
Sbjct: 363 QIQAVIEAGIIAPLVHLLQNAEF-EIKKEAAWAISNA 398


>pdb|4B8J|A Chain A, Rimp_alpha1a
          Length = 528

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/97 (39%), Positives = 59/97 (60%)
 Frame = -1

Query: 295 IAVITALGAIVRWGSRTDIEVIIEKKALMYLNRCLYDQMDMWFKKNSCWIISNIIAKTEN 116
           I  +  +G IV  G     + II+ +AL  L   L   +    KK +CW ISNI A  ++
Sbjct: 304 IPALRTVGNIVT-GDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKD 362

Query: 115 HIEAVVNSGLLDSLVGIIENCKFLNVKKEAAWAIANA 5
            I+AV+N+G++  LV +++  +F ++KKEAAWAI+NA
Sbjct: 363 QIQAVINAGIIGPLVNLLQTAEF-DIKKEAAWAISNA 398


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