BLASTX nr result

ID: Bupleurum21_contig00014637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014637
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    91   1e-16
ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    91   1e-16
ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    90   2e-16
ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    90   2e-16
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    86   3e-15

>ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           31-like [Cucumis sativus]
          Length = 842

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = +2

Query: 50  PMFETARSFPKPIISDEGADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPII 229
           P  E      +P  S  G+DSYLSETRFDQCSIS  SL+ I DAGY+KMT+VQEATLP+I
Sbjct: 294 PSGEKVSEMDRPRTSPGGSDSYLSETRFDQCSISPLSLKGIKDAGYEKMTVVQEATLPLI 353

Query: 230 LEGKDVLA 253
           L+GKDVLA
Sbjct: 354 LKGKDVLA 361


>ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           26-like [Cucumis sativus]
          Length = 841

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = +2

Query: 50  PMFETARSFPKPIISDEGADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPII 229
           P  E      +P  S  G+DSYLSETRFDQCSIS  SL+ I DAGY+KMT+VQEATLP+I
Sbjct: 293 PSGEKVSEMDRPRTSPGGSDSYLSETRFDQCSISPLSLKGIKDAGYEKMTVVQEATLPLI 352

Query: 230 LEGKDVLA 253
           L+GKDVLA
Sbjct: 353 LKGKDVLA 360


>ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
           max]
          Length = 806

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = +2

Query: 77  PKPIISDEGADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILEGKDVLA 253
           P+P     G+DSYLSETRFDQCSIS  SL+ + DAGY+KMT+VQEATLP+IL+GKDVLA
Sbjct: 321 PRPSSPGGGSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLA 379


>ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
           max]
          Length = 703

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = +2

Query: 77  PKPIISDEGADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIILEGKDVLA 253
           P+P     G+DSYLSETRFDQCSIS  SL+ + DAGY+KMT+VQEATLP+IL+GKDVLA
Sbjct: 218 PRPSSPGGGSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLA 276


>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
           vinifera]
          Length = 751

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/67 (65%), Positives = 51/67 (76%)
 Frame = +2

Query: 53  MFETARSFPKPIISDEGADSYLSETRFDQCSISSSSLRAINDAGYDKMTIVQEATLPIIL 232
           +F  A     P  S   +DSYLSETRFDQC IS  SL+AI DAGY+KMT+VQEATLP+IL
Sbjct: 259 LFGAAAKEAVPRSSTGKSDSYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVIL 318

Query: 233 EGKDVLA 253
           +GKDVLA
Sbjct: 319 KGKDVLA 325


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