BLASTX nr result

ID: Bupleurum21_contig00014631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014631
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29717.3| unnamed protein product [Vitis vinifera]              245   3e-63
ref|XP_002263770.1| PREDICTED: embryogenesis-associated protein ...   245   3e-63
emb|CBI18536.3| unnamed protein product [Vitis vinifera]              245   4e-63
ref|XP_002266169.1| PREDICTED: embryogenesis-associated protein ...   245   4e-63
ref|XP_002441157.1| hypothetical protein SORBIDRAFT_09g021390 [S...   238   5e-61

>emb|CBI29717.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  245 bits (626), Expect = 3e-63
 Identities = 116/193 (60%), Positives = 149/193 (77%), Gaps = 2/193 (1%)
 Frame = -2

Query: 575 SGSELYNSVVSKCKVLHTRYLSSPWLASPHFHTTLIELFGKAPAFTYKRELFYTSEGGTI 396
           SGSELY +V SKC++LH RYL++ WL+SPH  T  +  FG+ P F+Y+R+LF+TS+GGTI
Sbjct: 63  SGSELYEAVASKCQILHGRYLATSWLSSPHLQTAFLSFFGRPPVFSYRRQLFHTSDGGTI 122

Query: 395 ALDWLMGSD--GSFSDERNVISKNTATPIVVVIPGLTSDSSSAYVKIFVSKMAKHGWNVV 222
           ALDWLM SD  G   +  + I K+  TPIVVVIPGLTSDS+SAY+K    KMAK GWNVV
Sbjct: 123 ALDWLMNSDVMGVAINMNDTIRKDDKTPIVVVIPGLTSDSASAYIKHLAFKMAKSGWNVV 182

Query: 221 VTNHRGMGGVLHTSELIYNAGWTKDIRDINNYLREEYPDAPLYLVGLSIGANIVGKYLGE 42
           V+NHRG+GG+  TS+ +YNAGWT+DIR I ++L  +YP+APL+ VG SIGAN++ KYLGE
Sbjct: 183 VSNHRGLGGISVTSDCMYNAGWTEDIRKIVDHLHCQYPEAPLFAVGTSIGANVLVKYLGE 242

Query: 41  DGDKSPVAGAAVV 3
           DG   P+ GAA +
Sbjct: 243 DGVNIPLVGAAAI 255


>ref|XP_002263770.1| PREDICTED: embryogenesis-associated protein EMB8 [Vitis vinifera]
          Length = 568

 Score =  245 bits (626), Expect = 3e-63
 Identities = 116/193 (60%), Positives = 149/193 (77%), Gaps = 2/193 (1%)
 Frame = -2

Query: 575 SGSELYNSVVSKCKVLHTRYLSSPWLASPHFHTTLIELFGKAPAFTYKRELFYTSEGGTI 396
           SGSELY +V SKC++LH RYL++ WL+SPH  T  +  FG+ P F+Y+R+LF+TS+GGTI
Sbjct: 63  SGSELYEAVASKCQILHGRYLATSWLSSPHLQTAFLSFFGRPPVFSYRRQLFHTSDGGTI 122

Query: 395 ALDWLMGSD--GSFSDERNVISKNTATPIVVVIPGLTSDSSSAYVKIFVSKMAKHGWNVV 222
           ALDWLM SD  G   +  + I K+  TPIVVVIPGLTSDS+SAY+K    KMAK GWNVV
Sbjct: 123 ALDWLMNSDVMGVAINMNDTIRKDDKTPIVVVIPGLTSDSASAYIKHLAFKMAKSGWNVV 182

Query: 221 VTNHRGMGGVLHTSELIYNAGWTKDIRDINNYLREEYPDAPLYLVGLSIGANIVGKYLGE 42
           V+NHRG+GG+  TS+ +YNAGWT+DIR I ++L  +YP+APL+ VG SIGAN++ KYLGE
Sbjct: 183 VSNHRGLGGISVTSDCMYNAGWTEDIRKIVDHLHCQYPEAPLFAVGTSIGANVLVKYLGE 242

Query: 41  DGDKSPVAGAAVV 3
           DG   P+ GAA +
Sbjct: 243 DGVNIPLVGAAAI 255


>emb|CBI18536.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  245 bits (625), Expect = 4e-63
 Identities = 114/195 (58%), Positives = 148/195 (75%), Gaps = 3/195 (1%)
 Frame = -2

Query: 578 DSGSELYNSVVSKCKVLHTRYLSSPWLASPHFHTTLIELFGKAPAFTYKRELFYTSEGGT 399
           +S S++Y  VVSKCK+LH RYL++PWL+SPHF T  +  FG+ P   Y+R++F+ S+GG+
Sbjct: 67  NSHSQIYEGVVSKCKILHGRYLATPWLSSPHFQTAFLNFFGRPPVVNYRRQIFHASDGGS 126

Query: 398 IALDWLMGSD---GSFSDERNVISKNTATPIVVVIPGLTSDSSSAYVKIFVSKMAKHGWN 228
           +ALDWL+ SD   G+F    N ISK+  TPIVVVIPGLTSDS+SAY+K F   M K GWN
Sbjct: 127 LALDWLLPSDVLRGAFH-ANNAISKDDTTPIVVVIPGLTSDSTSAYIKHFALNMVKRGWN 185

Query: 227 VVVTNHRGMGGVLHTSELIYNAGWTKDIRDINNYLREEYPDAPLYLVGLSIGANIVGKYL 48
           +VV+NHRG+GG+  TS+  YNAGWT+DIR++  +L  EYP APL+ VG SIGANI+ KYL
Sbjct: 186 IVVSNHRGLGGISITSDCFYNAGWTEDIREVIAHLHHEYPVAPLFAVGTSIGANILVKYL 245

Query: 47  GEDGDKSPVAGAAVV 3
           GEDG+  PVAGA  +
Sbjct: 246 GEDGENIPVAGAVAI 260


>ref|XP_002266169.1| PREDICTED: embryogenesis-associated protein EMB8-like [Vitis
           vinifera]
          Length = 571

 Score =  245 bits (625), Expect = 4e-63
 Identities = 114/195 (58%), Positives = 148/195 (75%), Gaps = 3/195 (1%)
 Frame = -2

Query: 578 DSGSELYNSVVSKCKVLHTRYLSSPWLASPHFHTTLIELFGKAPAFTYKRELFYTSEGGT 399
           +S S++Y  VVSKCK+LH RYL++PWL+SPHF T  +  FG+ P   Y+R++F+ S+GG+
Sbjct: 67  NSHSQIYEGVVSKCKILHGRYLATPWLSSPHFQTAFLNFFGRPPVVNYRRQIFHASDGGS 126

Query: 398 IALDWLMGSD---GSFSDERNVISKNTATPIVVVIPGLTSDSSSAYVKIFVSKMAKHGWN 228
           +ALDWL+ SD   G+F    N ISK+  TPIVVVIPGLTSDS+SAY+K F   M K GWN
Sbjct: 127 LALDWLLPSDVLRGAFH-ANNAISKDDTTPIVVVIPGLTSDSTSAYIKHFALNMVKRGWN 185

Query: 227 VVVTNHRGMGGVLHTSELIYNAGWTKDIRDINNYLREEYPDAPLYLVGLSIGANIVGKYL 48
           +VV+NHRG+GG+  TS+  YNAGWT+DIR++  +L  EYP APL+ VG SIGANI+ KYL
Sbjct: 186 IVVSNHRGLGGISITSDCFYNAGWTEDIREVIAHLHHEYPVAPLFAVGTSIGANILVKYL 245

Query: 47  GEDGDKSPVAGAAVV 3
           GEDG+  PVAGA  +
Sbjct: 246 GEDGENIPVAGAVAI 260


>ref|XP_002441157.1| hypothetical protein SORBIDRAFT_09g021390 [Sorghum bicolor]
           gi|241946442|gb|EES19587.1| hypothetical protein
           SORBIDRAFT_09g021390 [Sorghum bicolor]
          Length = 596

 Score =  238 bits (607), Expect = 5e-61
 Identities = 113/192 (58%), Positives = 146/192 (76%), Gaps = 3/192 (1%)
 Frame = -2

Query: 569 SELYNSVVSKCKVLHTRYLSSPWLASPHFHTTLIELFGKAPAFTYKRELFYTSEGGTIAL 390
           S++Y+ V SKC+ LH RYL++PWLASPH  T  + + G+ P+FTY R+L+   +GGTIAL
Sbjct: 70  SQVYHRVASKCRSLHGRYLATPWLASPHLQTLFLSISGRPPSFTYGRQLYTVRDGGTIAL 129

Query: 389 DWLMGSD---GSFSDERNVISKNTATPIVVVIPGLTSDSSSAYVKIFVSKMAKHGWNVVV 219
           DWL+ SD   G        ISK+ +TP+VVVIPGLTSDSS+AYVK  V  MA  GWNVVV
Sbjct: 130 DWLLASDLEAGDVGTCDGTISKDDSTPLVVVIPGLTSDSSAAYVKHLVFSMAIKGWNVVV 189

Query: 218 TNHRGMGGVLHTSELIYNAGWTKDIRDINNYLREEYPDAPLYLVGLSIGANIVGKYLGED 39
           +NHRG+GG+  TS+  YNAGWT+D+R++ N+L +EYP APL+ VG SIGANIV KYLGE+
Sbjct: 190 SNHRGLGGISITSDCFYNAGWTEDMREVVNFLHQEYPKAPLFTVGTSIGANIVVKYLGEE 249

Query: 38  GDKSPVAGAAVV 3
           G+ +PVAGAA +
Sbjct: 250 GENTPVAGAASI 261


Top