BLASTX nr result

ID: Bupleurum21_contig00014626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014626
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_003547270.1| PREDICTED: katanin p60 ATPase-containing sub...   446   e-123
ref|XP_002518418.1| 26S protease regulatory subunit, putative [R...   434   e-119
ref|XP_002452576.1| hypothetical protein SORBIDRAFT_04g028420 [S...   433   e-119
ref|NP_001048071.1| Os02g0740300 [Oryza sativa Japonica Group] g...   428   e-117

>ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|222873785|gb|EEF10916.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  451 bits (1160), Expect = e-124
 Identities = 231/288 (80%), Positives = 253/288 (87%), Gaps = 3/288 (1%)
 Frame = +3

Query: 9    SKNEISWDNIAGYAQQKREIEDTILLAIKSPEVYDDIARGTRCKFETNRPRAVLFEGPPG 188
            S N+ISW+NIAGY QQKREIEDTILLA++SPEVYDDIARGTR KFE+NRPRAVLFEGPPG
Sbjct: 275  SSNDISWENIAGYDQQKREIEDTILLALQSPEVYDDIARGTRRKFESNRPRAVLFEGPPG 334

Query: 189  TGKTSCARVIANQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANEIPNGAIIFLDEID 368
            TGKTSCARVIA QAGVPLLY+PLEVVMSKYYGESERLLGKVF+LANEIPNGAIIFLDE+D
Sbjct: 335  TGKTSCARVIATQAGVPLLYLPLEVVMSKYYGESERLLGKVFTLANEIPNGAIIFLDEVD 394

Query: 369  SFATARDNETHEATRRVLSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALVSRFDSMIMF 548
            SFA ARD+E HEATRR+LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL+SRFDSMI F
Sbjct: 395  SFAAARDSEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITF 454

Query: 549  GLPDQNTRQEIAAQYAKHLTKSELSEFSTVTEDMSGRDIRDVCQQAERHWASKIIRGQTP 728
            GLPD+  RQEIAAQYAKHLT+SEL EF+ VTEDMSGRDIRDVCQQAER WASKIIRGQ  
Sbjct: 455  GLPDRQNRQEIAAQYAKHLTESELEEFARVTEDMSGRDIRDVCQQAERSWASKIIRGQAS 514

Query: 729  KEEEGTSLPPLQEYIDSAASRRRALIGAA---CQNQYVNPFSKKPEYD 863
            K+    +LPPL EY +SA +RR+AL   A    Q   + P  +KP+ D
Sbjct: 515  KDGGQGNLPPLAEYTESAMNRRKALASIAEQKSQGSIMRP--QKPQLD 560


>ref|XP_003547270.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like [Glycine
            max]
          Length = 573

 Score =  446 bits (1148), Expect = e-123
 Identities = 222/278 (79%), Positives = 243/278 (87%)
 Frame = +3

Query: 18   EISWDNIAGYAQQKREIEDTILLAIKSPEVYDDIARGTRCKFETNRPRAVLFEGPPGTGK 197
            EISWDNIAGY  QKR +EDTILLA+ SPEVYDDIARGTR KFE+NRPRAVLFEGPPGTGK
Sbjct: 290  EISWDNIAGYEHQKRVVEDTILLALHSPEVYDDIARGTRHKFESNRPRAVLFEGPPGTGK 349

Query: 198  TSCARVIANQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANEIPNGAIIFLDEIDSFA 377
            TSCARVIANQAGVPLLYVPLE +MS++YG+SERLLGKVFSLAN +PNGAIIFLDEIDSFA
Sbjct: 350  TSCARVIANQAGVPLLYVPLEAIMSEFYGKSERLLGKVFSLANTLPNGAIIFLDEIDSFA 409

Query: 378  TARDNETHEATRRVLSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALVSRFDSMIMFGLP 557
             ARDNE HEATRR+LSVLLRQIDGFEQDKKVVVIAATNRK+DLDPAL+SRFDSMI FGLP
Sbjct: 410  AARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDSMIAFGLP 469

Query: 558  DQNTRQEIAAQYAKHLTKSELSEFSTVTEDMSGRDIRDVCQQAERHWASKIIRGQTPKEE 737
            D   RQEIA++YAKHL+K EL E + VTEDMSGRDIRDVCQQAER WASKIIRGQ PKE 
Sbjct: 470  DHQNRQEIASKYAKHLSKPELDELARVTEDMSGRDIRDVCQQAERSWASKIIRGQVPKEG 529

Query: 738  EGTSLPPLQEYIDSAASRRRALIGAACQNQYVNPFSKK 851
            E   LPPLQEYI+ A SR+ AL  AA   ++   F ++
Sbjct: 530  EKAQLPPLQEYIECATSRQEALHSAAANRKFAGSFRRR 567


>ref|XP_002518418.1| 26S protease regulatory subunit, putative [Ricinus communis]
            gi|223542263|gb|EEF43805.1| 26S protease regulatory
            subunit, putative [Ricinus communis]
          Length = 587

 Score =  434 bits (1117), Expect = e-119
 Identities = 217/271 (80%), Positives = 242/271 (89%)
 Frame = +3

Query: 9    SKNEISWDNIAGYAQQKREIEDTILLAIKSPEVYDDIARGTRCKFETNRPRAVLFEGPPG 188
            SK EISW+NIAGY QQK+EIEDTILLA+ SPEVYD+IARGTR KFE+NRPRAVLFEGPPG
Sbjct: 298  SKGEISWNNIAGYDQQKQEIEDTILLALHSPEVYDNIARGTRRKFESNRPRAVLFEGPPG 357

Query: 189  TGKTSCARVIANQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANEIPNGAIIFLDEID 368
            TGKTSCARVIA QAGVPLLYVPLEVVMSKYYGESE+LLGKVF+LANE+PNGAIIFLDE+D
Sbjct: 358  TGKTSCARVIATQAGVPLLYVPLEVVMSKYYGESEKLLGKVFALANELPNGAIIFLDEVD 417

Query: 369  SFATARDNETHEATRRVLSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALVSRFDSMIMF 548
            SFA ARDNE HEATRR+LSVLLRQIDGFEQDKKVVVIAATNRKQDLDPAL+SRFDSMI F
Sbjct: 418  SFAVARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITF 477

Query: 549  GLPDQNTRQEIAAQYAKHLTKSELSEFSTVTEDMSGRDIRDVCQQAERHWASKIIRGQTP 728
            GLPD+  RQEI AQYAKHL +S++ E + VT+ MSGRDI+DVCQQAER WASKIIRG+  
Sbjct: 478  GLPDEQNRQEIVAQYAKHLKRSDIEELAKVTDQMSGRDIKDVCQQAERSWASKIIRGKAD 537

Query: 729  KEEEGTSLPPLQEYIDSAASRRRALIGAACQ 821
            ++ E  +LP L EYI+SA  RR+AL+  A Q
Sbjct: 538  RDGEQGNLPTLSEYIESALIRRQALLSIADQ 568


>ref|XP_002452576.1| hypothetical protein SORBIDRAFT_04g028420 [Sorghum bicolor]
            gi|241932407|gb|EES05552.1| hypothetical protein
            SORBIDRAFT_04g028420 [Sorghum bicolor]
          Length = 543

 Score =  433 bits (1114), Expect = e-119
 Identities = 212/262 (80%), Positives = 238/262 (90%), Gaps = 1/262 (0%)
 Frame = +3

Query: 21   ISWDNIAGYAQQKREIEDTILLAIKSPEVYDDIARGTRCKFETNRPRAVLFEGPPGTGKT 200
            + W+N+AGY  QKREIEDTILLA++SPEVYDDIARGTRCKFETNRPRAVLFEGPPGTGKT
Sbjct: 266  VIWENLAGYEPQKREIEDTILLALQSPEVYDDIARGTRCKFETNRPRAVLFEGPPGTGKT 325

Query: 201  SCARVIANQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANEIPNGAIIFLDEIDSFAT 380
            S ARVIA QAGVPLLYVPLEVVMSKYYGESERLLG VFSLAN++P G IIFLDE+DSFA 
Sbjct: 326  SSARVIAKQAGVPLLYVPLEVVMSKYYGESERLLGSVFSLANDLPEGGIIFLDEVDSFAI 385

Query: 381  ARDNETHEATRRVLSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALVSRFDSMIMFGLPD 560
            ARD+E HEATRR+LSV+LRQIDGFEQD++VVVIAATNRK+DLDPAL+SRFDS+I FGLPD
Sbjct: 386  ARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALISRFDSIICFGLPD 445

Query: 561  QNTRQEIAAQYAKHLTKSELSEFSTVTEDMSGRDIRDVCQQAERHWASKIIRGQTPKEEE 740
            Q TR EIAAQYAKHLT+SEL +FS  TE+MSGRDIRDVCQQAERHWASK+IRGQ PK+E+
Sbjct: 446  QQTRAEIAAQYAKHLTRSELVQFSLATEEMSGRDIRDVCQQAERHWASKLIRGQVPKDEK 505

Query: 741  G-TSLPPLQEYIDSAASRRRAL 803
            G  SLPP+ EY+  A  RR++L
Sbjct: 506  GEPSLPPIDEYLSCAEQRRKSL 527


>ref|NP_001048071.1| Os02g0740300 [Oryza sativa Japonica Group]
            gi|46390305|dbj|BAD15754.1| putative AAA family ATPase
            [Oryza sativa Japonica Group]
            gi|113537602|dbj|BAF09985.1| Os02g0740300 [Oryza sativa
            Japonica Group] gi|215695439|dbj|BAG90630.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 611

 Score =  428 bits (1100), Expect = e-117
 Identities = 207/267 (77%), Positives = 239/267 (89%), Gaps = 1/267 (0%)
 Frame = +3

Query: 6    DSKNEISWDNIAGYAQQKREIEDTILLAIKSPEVYDDIARGTRCKFETNRPRAVLFEGPP 185
            D    + W+NIAGY  QKREIEDTILLA++SPEVYD+IAR TRCKFETNRPRAVLFEGPP
Sbjct: 329  DGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRPRAVLFEGPP 388

Query: 186  GTGKTSCARVIANQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANEIPNGAIIFLDEI 365
            GTGKTS ARVIA QAGVPLLYVPLE++MSKYYGESERLLG VFSLAN++P+G IIFLDE+
Sbjct: 389  GTGKTSSARVIAKQAGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDLPDGGIIFLDEV 448

Query: 366  DSFATARDNETHEATRRVLSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALVSRFDSMIM 545
            DSFA+ARD+E HEATRR+LSV+LRQIDGFEQD++VVVIAATNRK+DLDPAL+SRFDS+I 
Sbjct: 449  DSFASARDSEMHEATRRILSVILRQIDGFEQDRRVVVIAATNRKEDLDPALISRFDSIIC 508

Query: 546  FGLPDQNTRQEIAAQYAKHLTKSELSEFSTVTEDMSGRDIRDVCQQAERHWASKIIRGQT 725
            F LPDQ TR EI+AQYAKHLTKSEL +FS  TE+MSGRDIRD+CQQAERHWASK+IRGQ 
Sbjct: 509  FDLPDQQTRAEISAQYAKHLTKSELFQFSLATEEMSGRDIRDICQQAERHWASKLIRGQV 568

Query: 726  PKEEEG-TSLPPLQEYIDSAASRRRAL 803
            PK ++G  SLPP++EY+  +  RRR+L
Sbjct: 569  PKNDKGEPSLPPVEEYVACSEQRRRSL 595


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