BLASTX nr result

ID: Bupleurum21_contig00014622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014622
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...   204   1e-50
ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   202   7e-50
ref|XP_002300711.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   197   2e-48
ref|XP_002307715.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48

>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
           [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
           (adenine-N(1)-)-methyltransferase non-catalytic subunit
           trm6 [Medicago truncatula]
          Length = 457

 Score =  204 bits (520), Expect = 1e-50
 Identities = 98/153 (64%), Positives = 122/153 (79%), Gaps = 7/153 (4%)
 Frame = +3

Query: 42  SMNVDESMVTTEKGVSEFPATAAHSIA-------KVCKTAKAGERAPRETIKSWRETGFS 200
           S++++E   ++E G+S+  A  A +I        + CK  KAGE+A +E I SW+E GFS
Sbjct: 305 SVSMEEISHSSENGISDLGADNAENIESSTFPALRACKAIKAGEKASQEIIDSWKENGFS 364

Query: 201 SLIMAIPDAEAWTIVKEVLPLLSFSAPFAIYHQYLQPLATCMHNMQLGKMAIGLQIAEPW 380
           SLI+A PD + WT++K++LPLLS SAPFAIYHQYLQPLATCMHN+QL KMAIGLQI EPW
Sbjct: 365 SLIIAAPDLDTWTLIKDLLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPW 424

Query: 381 LREYQVLPSRTHPHMQMSAFGGYVLTGTRICSN 479
           LREYQVLPSRTHP MQMSAFGGY+L+GT+ICS+
Sbjct: 425 LREYQVLPSRTHPCMQMSAFGGYILSGTKICSS 457


>ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
           subunit trm6 [Vitis vinifera]
           gi|302142647|emb|CBI19850.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  202 bits (514), Expect = 7e-50
 Identities = 94/152 (61%), Positives = 119/152 (78%), Gaps = 4/152 (2%)
 Frame = +3

Query: 36  PDSMNVDESMVTTEKG----VSEFPATAAHSIAKVCKTAKAGERAPRETIKSWRETGFSS 203
           P S++ +E+ +++E G    + +    +   +AK CK  KAGE A  + I  W+E GFSS
Sbjct: 307 PHSISTEETTLSSENGMLDLIPQMVTASPPQVAKTCKATKAGENASLDAINLWKENGFSS 366

Query: 204 LIMAIPDAEAWTIVKEVLPLLSFSAPFAIYHQYLQPLATCMHNMQLGKMAIGLQIAEPWL 383
           L++A P+ + W+IV+E LP LS+SA FAIYHQYLQPLATCMHN+QLGKMAIGLQI+EPWL
Sbjct: 367 LLIAAPELDVWSIVQEFLPFLSYSASFAIYHQYLQPLATCMHNLQLGKMAIGLQISEPWL 426

Query: 384 REYQVLPSRTHPHMQMSAFGGYVLTGTRICSN 479
           REYQVLPSRTHP MQMSAFGGY+L+GTRICS+
Sbjct: 427 REYQVLPSRTHPCMQMSAFGGYILSGTRICSS 458


>ref|XP_002300711.1| predicted protein [Populus trichocarpa] gi|222842437|gb|EEE79984.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  201 bits (510), Expect = 2e-49
 Identities = 92/120 (76%), Positives = 109/120 (90%)
 Frame = +3

Query: 120 AKVCKTAKAGERAPRETIKSWRETGFSSLIMAIPDAEAWTIVKEVLPLLSFSAPFAIYHQ 299
           +K+ K  KAGE+A  E IKSW+E GFSSLI+A PDA+AW++ K++LPLLS+SAPFAIYHQ
Sbjct: 267 SKMGKPPKAGEKASEEAIKSWKENGFSSLIIAAPDADAWSLAKDLLPLLSYSAPFAIYHQ 326

Query: 300 YLQPLATCMHNMQLGKMAIGLQIAEPWLREYQVLPSRTHPHMQMSAFGGYVLTGTRICSN 479
           YLQPLATCMHN+Q GKMAIGLQI+EPWLREYQVLPSRTHP MQMSAFGGY+L+GT+ICS+
Sbjct: 327 YLQPLATCMHNLQQGKMAIGLQISEPWLREYQVLPSRTHPLMQMSAFGGYILSGTKICSS 386


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
           subunit trm6-like [Glycine max]
          Length = 440

 Score =  197 bits (501), Expect = 2e-48
 Identities = 92/145 (63%), Positives = 116/145 (80%)
 Frame = +3

Query: 42  SMNVDESMVTTEKGVSEFPATAAHSIAKVCKTAKAGERAPRETIKSWRETGFSSLIMAIP 221
           S ++++   ++E G+S+  A       +V K  KAGERA +E I  W+E GFSSLI+A P
Sbjct: 294 STSMEDISHSSENGISDLGAENTEPAKEVWKAPKAGERAQKEIIDLWKENGFSSLIIAAP 353

Query: 222 DAEAWTIVKEVLPLLSFSAPFAIYHQYLQPLATCMHNMQLGKMAIGLQIAEPWLREYQVL 401
           + + WT+V+++LPLL+ SAPFAIYHQYLQPLATCMHN+QL KMAIGLQI EPWLREYQVL
Sbjct: 354 ELDTWTLVRDILPLLADSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVL 413

Query: 402 PSRTHPHMQMSAFGGYVLTGTRICS 476
           PSRTHP MQMS+FGGY+L+GT+ICS
Sbjct: 414 PSRTHPCMQMSSFGGYILSGTKICS 438


>ref|XP_002307715.1| predicted protein [Populus trichocarpa] gi|222857164|gb|EEE94711.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  197 bits (501), Expect = 2e-48
 Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 10/157 (6%)
 Frame = +3

Query: 39  DSMNVDESMVTTEKGVSEFPATAAHSIA----------KVCKTAKAGERAPRETIKSWRE 188
           DS N + ++  +   + E P  + H  A          K+ K  KAGE+A  E +KSW+E
Sbjct: 278 DSCNAELNVQISTISIEEMPLPSKHEAADSQTIVSPQSKMGKAPKAGEKASEEALKSWKE 337

Query: 189 TGFSSLIMAIPDAEAWTIVKEVLPLLSFSAPFAIYHQYLQPLATCMHNMQLGKMAIGLQI 368
            GFSSLI+A PDA+AW +VK +LPL+S+SAPFAIYHQYLQPLATCMHN+Q  KMAIG+QI
Sbjct: 338 NGFSSLIIAAPDADAWNLVKVLLPLISYSAPFAIYHQYLQPLATCMHNLQQSKMAIGMQI 397

Query: 369 AEPWLREYQVLPSRTHPHMQMSAFGGYVLTGTRICSN 479
           +EPWLREYQVLPSRT P MQMS+FGGY+L+GT+ICS+
Sbjct: 398 SEPWLREYQVLPSRTRPSMQMSSFGGYILSGTKICSS 434


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