BLASTX nr result

ID: Bupleurum21_contig00014612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014612
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...    82   3e-21
emb|CBI20737.3| unnamed protein product [Vitis vinifera]               82   3e-21
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...    81   6e-21
ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799...    75   1e-18
ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-18

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 1580

 Score = 82.4 bits (202), Expect(2) = 3e-21
 Identities = 36/60 (60%), Positives = 48/60 (80%)
 Frame = +1

Query: 1   RYEENGSADVSVDSGRTSQVLAGSFNSGQGRDSYGERMQGRSQARTAPVWLETGEAVANI 180
           +++ NG+ADV+V S R+S VLA S+NSG GR +YG+R+Q R  AR AP W+ETGEAVAN+
Sbjct: 354 KFDRNGTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAVANM 413



 Score = 44.3 bits (103), Expect(2) = 3e-21
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 255 EMAANMYTESREEARDYARLRNVYLEQ 335
           E  ANMY+E REEARD+ARLRN Y EQ
Sbjct: 408 EAVANMYSELREEARDHARLRNAYFEQ 434


>emb|CBI20737.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score = 82.4 bits (202), Expect(2) = 3e-21
 Identities = 36/60 (60%), Positives = 48/60 (80%)
 Frame = +1

Query: 1   RYEENGSADVSVDSGRTSQVLAGSFNSGQGRDSYGERMQGRSQARTAPVWLETGEAVANI 180
           +++ NG+ADV+V S R+S VLA S+NSG GR +YG+R+Q R  AR AP W+ETGEAVAN+
Sbjct: 303 KFDRNGTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAVANM 362



 Score = 44.3 bits (103), Expect(2) = 3e-21
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 255 EMAANMYTESREEARDYARLRNVYLEQ 335
           E  ANMY+E REEARD+ARLRN Y EQ
Sbjct: 357 EAVANMYSELREEARDHARLRNAYFEQ 383


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score = 81.3 bits (199), Expect(2) = 6e-21
 Identities = 39/60 (65%), Positives = 45/60 (75%)
 Frame = +1

Query: 1   RYEENGSADVSVDSGRTSQVLAGSFNSGQGRDSYGERMQGRSQARTAPVWLETGEAVANI 180
           +YE NGSAD +V S R+S VLA S++SG GR  Y ER Q R  AR APVWLETGEAVAN+
Sbjct: 362 KYERNGSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWLETGEAVANM 421



 Score = 44.3 bits (103), Expect(2) = 6e-21
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +3

Query: 255 EMAANMYTESREEARDYARLRNVYLEQ 335
           E  ANMY+E REEARD+ARLRN Y EQ
Sbjct: 416 EAVANMYSELREEARDHARLRNAYFEQ 442


>ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799961 [Glycine max]
          Length = 572

 Score = 74.7 bits (182), Expect(2) = 1e-18
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = +1

Query: 1   RYEENGSADVSVDSGRTSQVLAGSFNSGQGRDSYGERMQGRSQARTAPVWLETGEAVANI 180
           +Y++NGS D S  S R+   LA ++N GQGR + G+R+Q R  AR APVWLETG+AVAN+
Sbjct: 354 KYDKNGSGDASTGSSRSLNALASAYNGGQGRVNNGDRLQNRGSARAAPVWLETGDAVANM 413



 Score = 43.1 bits (100), Expect(2) = 1e-18
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +3

Query: 255 EMAANMYTESREEARDYARLRNVYLEQ 335
           +  ANMY+E REEARD+ARLRN Y EQ
Sbjct: 408 DAVANMYSELREEARDHARLRNAYFEQ 434


>ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 1582

 Score = 77.0 bits (188), Expect(2) = 2e-18
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = +1

Query: 1   RYEENGSADVSVDSGRTSQVLAGSFNSGQGRDSYGERMQGRSQARTAPVWLETGEAVANI 180
           +Y++NGS D ++ S R S VLA  +N GQGR  +G+R+Q R  AR  PVWLETG+AVAN+
Sbjct: 358 KYDKNGSGDAAIGSSRNSNVLASGYNGGQGRAHFGDRLQNRGSARAFPVWLETGDAVANM 417



 Score = 40.0 bits (92), Expect(2) = 2e-18
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +3

Query: 255 EMAANMYTESREEARDYARLRNVYLEQ 335
           +  ANMY+E REEARD+A LRN Y EQ
Sbjct: 412 DAVANMYSELREEARDHACLRNAYFEQ 438


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