BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014611
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   149   2e-34
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   125   3e-27
gb|AAM65969.1| unknown [Arabidopsis thaliana]                         124   7e-27
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   124   9e-27
ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263...   123   2e-26

>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/126 (60%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
 Frame = +1

Query: 49  SSKSDVNRYFPQKKKTITK-PSHSGKASKKSPALAKHAATFGSDVVQPPALVTHGGALDL 225
           +S +D+  ++ QKK   T     S K+ KKSP   KHAA  GS++ QP AL++HGGALDL
Sbjct: 4   ASPNDMKSFYRQKKTNKTGITKSSSKSKKKSPP--KHAAAIGSNITQPTALISHGGALDL 61

Query: 226 KDNYDGNEEVLRQFDMNMTYGPCIGMSRVARWERAGRLGLNPPSIVGQLLRTGKVGGEFS 405
           +D+YD NEEVLRQFDMNM YGPC+GM+RV RWERA RLGLNPP  +  LL+ GKV  E  
Sbjct: 62  QDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQIEDLLKGGKVNSE-C 120

Query: 406 LWDGRV 423
           LWDGRV
Sbjct: 121 LWDGRV 126


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/125 (51%), Positives = 88/125 (70%)
 Frame = +1

Query: 49  SSKSDVNRYFPQKKKTITKPSHSGKASKKSPALAKHAATFGSDVVQPPALVTHGGALDLK 228
           ++  ++  ++ Q K  IT      K S +  A  KHAA  GSDV QP AL++HG ++DL 
Sbjct: 3   TTAKNLKGFYKQTKSNITGGISKSKPSSRKVA-PKHAAAQGSDVTQPAALISHG-SVDLN 60

Query: 229 DNYDGNEEVLRQFDMNMTYGPCIGMSRVARWERAGRLGLNPPSIVGQLLRTGKVGGEFSL 408
           ++YD  EE+LRQFDMN+TYGPC+GM+R+ RWERA RLG+NPP+ + +LL+TGKV  +  L
Sbjct: 61  EDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQD-CL 119

Query: 409 WDGRV 423
           W GRV
Sbjct: 120 WQGRV 124


>gb|AAM65969.1| unknown [Arabidopsis thaliana]
          Length = 124

 Score =  124 bits (312), Expect = 7e-27
 Identities = 63/125 (50%), Positives = 88/125 (70%)
 Frame = +1

Query: 49  SSKSDVNRYFPQKKKTITKPSHSGKASKKSPALAKHAATFGSDVVQPPALVTHGGALDLK 228
           ++  ++  ++ Q K  IT      K S +  A  KHAA  GSDV QP AL++HG ++DL 
Sbjct: 3   TTAKNLKGFYKQTKSNITGGISKSKPSSRKVA-PKHAAAQGSDVTQPAALISHG-SVDLN 60

Query: 229 DNYDGNEEVLRQFDMNMTYGPCIGMSRVARWERAGRLGLNPPSIVGQLLRTGKVGGEFSL 408
           ++YD  EE+LRQFDMN+TYGPC+GM+R+ RW+RA RLG+NPP+ + +LL+TGKV  +  L
Sbjct: 61  EDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIEKLLKTGKVQQD-CL 119

Query: 409 WDGRV 423
           W GRV
Sbjct: 120 WQGRV 124


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  124 bits (311), Expect = 9e-27
 Identities = 63/117 (53%), Positives = 83/117 (70%)
 Frame = +1

Query: 73  YFPQKKKTITKPSHSGKASKKSPALAKHAATFGSDVVQPPALVTHGGALDLKDNYDGNEE 252
           ++ Q K  IT      K S +     KHAA  GSDV+QP AL++HG +LDL ++YD  EE
Sbjct: 9   FYKQTKSNITGGISKSKPSSRK-VTPKHAAAQGSDVIQPAALISHG-SLDLNEDYDKEEE 66

Query: 253 VLRQFDMNMTYGPCIGMSRVARWERAGRLGLNPPSIVGQLLRTGKVGGEFSLWDGRV 423
           +LRQFDMN+ YGPC+GM+R+ RWERA RLG+NPP+ + +LL+TGKV  +  LW GRV
Sbjct: 67  MLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQD-CLWQGRV 122


>ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263057 [Vitis vinifera]
          Length = 122

 Score =  123 bits (309), Expect = 2e-26
 Identities = 69/128 (53%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
 Frame = +1

Query: 52  SKSDVNRYFPQKK----KTITKPSHSGKASKKSPALAKHAATFGSDVVQPPALVTHGGAL 219
           +  ++  YF QKK    + I KP  S K++K  P    H AT GSDVVQP  L  H    
Sbjct: 2   ASGNMKGYFKQKKSGGGRGIAKPKPSKKSTKIQPT---HVATLGSDVVQPSTLSAHNLQ- 57

Query: 220 DLKDNYDGNEEVLRQFDMNMTYGPCIGMSRVARWERAGRLGLNPPSIVGQLLRTGKVGGE 399
              D YDGNE VLRQFDMNM YGPC+GMSR+ARWERA RLGLNPP  +  LL+ GK   +
Sbjct: 58  --DDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPKEIETLLKQGKARAD 115

Query: 400 FSLWDGRV 423
             LWDG V
Sbjct: 116 -CLWDGCV 122