BLASTX nr result

ID: Bupleurum21_contig00014602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014602
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528449.1| carnitine racemase, putative [Ricinus commun...   218   1e-54
ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
emb|CAN82361.1| hypothetical protein VITISV_029254 [Vitis vinifera]   203   3e-50
ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   202   6e-50
ref|XP_002528495.1| carnitine racemase, putative [Ricinus commun...   201   1e-49

>ref|XP_002528449.1| carnitine racemase, putative [Ricinus communis]
           gi|223532125|gb|EEF33932.1| carnitine racemase, putative
           [Ricinus communis]
          Length = 240

 Score =  218 bits (556), Expect = 1e-54
 Identities = 108/176 (61%), Positives = 133/176 (75%)
 Frame = +3

Query: 69  HGKFFSNGYDLDWAFSDPARPKIMSLKLRSVIRDLISLPMPTIAAVTGHASAGGMILALS 248
           HGKFFSNGYDL+W  S  +R +++S K RS+I  LI+LPMPTIAAVTGHASA G ILA+S
Sbjct: 54  HGKFFSNGYDLEWTQSSKSRRQLLSSKFRSLISSLIALPMPTIAAVTGHASAAGFILAIS 113

Query: 249 HDYVLMRKDRGFLYMSEMDIGLKFPRWFVSVLKCKIGSPAVWRDVLLRGEKITAETAVKN 428
           HD+VLMRKDRGFLYMSE+DIGL  P WF ++LKCKIG   V RDV+L  EK+TA+ A++ 
Sbjct: 114 HDFVLMRKDRGFLYMSEVDIGLVIPEWFNAILKCKIGDYNVRRDVVLIAEKLTAKVALEK 173

Query: 429 GIIEAACGGAEETVKMAVELGEDLVRRKWKAQVYADNRLTVFGDVLPALEFDETVE 596
            II +A   AE TV  AV L E+L++RKW   VY +NRL V  +VL  + FDE+VE
Sbjct: 174 RIIHSAHDSAESTVDAAVVLAEELIKRKWNGHVYGNNRLVVLSEVLDKIGFDESVE 229


>ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|222865338|gb|EEF02469.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  208 bits (530), Expect = 1e-51
 Identities = 108/188 (57%), Positives = 133/188 (70%)
 Frame = +3

Query: 3   ALHRVRAEXXXXXXXXXXXXXXHGKFFSNGYDLDWAFSDPARPKIMSLKLRSVIRDLISL 182
           AL RVRAE               G+FFSNG+DL WA S   R ++MS KL+ ++++LISL
Sbjct: 34  ALRRVRAEPASPSSALVTIA--EGRFFSNGFDLAWAQSSQPRRELMSAKLQLLVKELISL 91

Query: 183 PMPTIAAVTGHASAGGMILALSHDYVLMRKDRGFLYMSEMDIGLKFPRWFVSVLKCKIGS 362
           PMPTIA+VTGHASA GMILALSHDYVLMRKDRGFLYMSE+DIGL  P WF+ +LKCKIG 
Sbjct: 92  PMPTIASVTGHASAAGMILALSHDYVLMRKDRGFLYMSELDIGLVLPDWFMVLLKCKIGD 151

Query: 363 PAVWRDVLLRGEKITAETAVKNGIIEAACGGAEETVKMAVELGEDLVRRKWKAQVYADNR 542
             V  +V+L   K+TAE A   GI+ +A  GAEETV+ A+ LG++LV+R W   VY  NR
Sbjct: 152 ARVRSEVVLTAAKLTAEMAAVRGIVHSAHDGAEETVEAAIRLGQELVKRGWDGNVYGKNR 211

Query: 543 LTVFGDVL 566
           + V  +VL
Sbjct: 212 MVVLKEVL 219


>emb|CAN82361.1| hypothetical protein VITISV_029254 [Vitis vinifera]
          Length = 241

 Score =  203 bits (517), Expect = 3e-50
 Identities = 109/208 (52%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
 Frame = +3

Query: 3   ALHRVRAEXXXXXXXXXXXXXXHGKFFSNGYDLDWAFSDPA----RPKIMSLKLRSVIRD 170
           AL RVRAE               GKFFSNGYDL WA +       R K+MS KLRS++ D
Sbjct: 34  ALSRVRAESSMSSALITTA---EGKFFSNGYDLAWASASGGVFLDRVKLMSSKLRSLVAD 90

Query: 171 LISLPMPTIAAVTGHASAGGMILALSHDYVLMRKDRGFLYMSEMDIGLKFPRWFVSVLKC 350
           L+SLPMPTIAA++GH SA   ILALSHDYVLMR DRGF+YMSE+DIGLK P WFV++++ 
Sbjct: 91  LLSLPMPTIAAISGHCSAAAAILALSHDYVLMRNDRGFIYMSELDIGLKIPDWFVALIRS 150

Query: 351 KIGSPAVWRDVLLRGEKITAETAVKNGIIEAACGGAEETVKMAVELGEDLVRRKWKAQVY 530
           KIG+P   R+++LR  K+TA  A+  GII++A    EE V+ A+ LGE+LV RKW   VY
Sbjct: 151 KIGAPRSQRELMLRAAKLTAHDALNWGIIDSAHDSTEEAVRAAIRLGEELVGRKWDGHVY 210

Query: 531 ADNRLTVFGDVLPALEFDETVEHVDVNR 614
           A  R+ +  DV   +  DE+V  V   R
Sbjct: 211 AQIRMRMLADVFDKIGCDESVGEVSHTR 238


>ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 241

 Score =  202 bits (515), Expect = 6e-50
 Identities = 109/208 (52%), Positives = 136/208 (65%), Gaps = 4/208 (1%)
 Frame = +3

Query: 3   ALHRVRAEXXXXXXXXXXXXXXHGKFFSNGYDLDWAFSDPA----RPKIMSLKLRSVIRD 170
           AL RVRAE               GKFFSNGYDL WA +       R K+MS KLRS++ D
Sbjct: 34  ALSRVRAESSMSSALITTA---EGKFFSNGYDLAWASASGGVFLDRVKLMSSKLRSLVAD 90

Query: 171 LISLPMPTIAAVTGHASAGGMILALSHDYVLMRKDRGFLYMSEMDIGLKFPRWFVSVLKC 350
           L+SLPMPTIAA++GH SA   ILALSHDYVLMR DRGF+YMSE+DIGLK P WFV+ ++ 
Sbjct: 91  LLSLPMPTIAAISGHCSAAAAILALSHDYVLMRNDRGFIYMSELDIGLKIPDWFVAFIRS 150

Query: 351 KIGSPAVWRDVLLRGEKITAETAVKNGIIEAACGGAEETVKMAVELGEDLVRRKWKAQVY 530
           KIG+P   R+++LR  K+TA  A+  GII++A    EE V+ A+ LGE+LV RKW   VY
Sbjct: 151 KIGAPRSQRELMLRAAKLTAHDALNWGIIDSAHDSTEEAVRAAIRLGEELVGRKWDGHVY 210

Query: 531 ADNRLTVFGDVLPALEFDETVEHVDVNR 614
           A  R+ +  DV   +  DE+V  V   R
Sbjct: 211 AQIRMRMLADVFDKIGCDESVGEVSHTR 238


>ref|XP_002528495.1| carnitine racemase, putative [Ricinus communis]
           gi|223532104|gb|EEF33912.1| carnitine racemase, putative
           [Ricinus communis]
          Length = 246

 Score =  201 bits (512), Expect = 1e-49
 Identities = 102/177 (57%), Positives = 127/177 (71%)
 Frame = +3

Query: 72  GKFFSNGYDLDWAFSDPARPKIMSLKLRSVIRDLISLPMPTIAAVTGHASAGGMILALSH 251
           GKFFSNG DL WA S   R K+M   L+ ++ +LISLPMPTIAAVTGHASAGGMILALSH
Sbjct: 64  GKFFSNGLDLAWAQSCQQRFKLMCSALQLLVSELISLPMPTIAAVTGHASAGGMILALSH 123

Query: 252 DYVLMRKDRGFLYMSEMDIGLKFPRWFVSVLKCKIGSPAVWRDVLLRGEKITAETAVKNG 431
           D++LMRKDRGFLYMSEMDI L  PR F+ + KCKIG   V ++V+L+  K+TAE A   G
Sbjct: 124 DFILMRKDRGFLYMSEMDIELVIPRQFMVLFKCKIGDAIVRQEVILKAAKLTAEMATARG 183

Query: 432 IIEAACGGAEETVKMAVELGEDLVRRKWKAQVYADNRLTVFGDVLPALEFDETVEHV 602
           I+ +A   AE TV  AV LGE+L++RKW   VY  NR+ +  +VL   + D+ VE +
Sbjct: 184 IVHSAHDSAEATVDAAVRLGEELLKRKWNGDVYGKNRMVLLSEVLEESKLDKDVEEI 240


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