BLASTX nr result

ID: Bupleurum21_contig00014595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014595
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855...   161   3e-37
ref|XP_002307593.1| predicted protein [Populus trichocarpa] gi|2...   160   4e-37
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   160   6e-37
ref|XP_002300834.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-35
ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   147   4e-33

>ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855273 [Vitis vinifera]
            gi|296085215|emb|CBI28710.3| unnamed protein product
            [Vitis vinifera]
          Length = 293

 Score =  161 bits (407), Expect = 3e-37
 Identities = 108/230 (46%), Positives = 134/230 (58%), Gaps = 15/230 (6%)
 Frame = +3

Query: 402  EKLLMADQHSLQSPT-NQTTPLSSLFASPRFFNGSFRKGSTSSSIFDSETIMSPTSILDS 578
            ++ +M D  SL SPT N T P+S L  SP+ F     +G  S  + ++E I+SPTSI D+
Sbjct: 12   KQAIMGDHSSLPSPTENLTKPISFLLGSPKIF-----RGFISKCLPEAEDIISPTSIFDT 66

Query: 579  KKVSTFITPFGYDQNMSK----SQNTSSQENKHLQEKGLGLALVDSLNDEKDLENFNFIK 746
            K  S    PF Y++  +     S+   S EN  L   G+G+AL+DS     +  N NF K
Sbjct: 67   KPFSG--NPFEYEKTQASPGTFSETKRSWEN--LDSIGIGVALIDSDPINGEGANENFSK 122

Query: 747  P---------KLKIQIPTLPLSACSPNQSPKCPADFGIKTPNRNSQCPK-SPFNGLNSGV 896
            P         +LK+QIP L  SA SP +SPK PADFGIKT  RNSQ    SPF  LNSG+
Sbjct: 123  PNSRMVLFGSQLKVQIPHLQPSALSPAESPKSPADFGIKT--RNSQLASLSPFGSLNSGI 180

Query: 897  QENKYLNSPTGALTLSEMELSEDYTCVISHGPNPKTIRIYDNCIVESCNG 1046
            Q        TG      MELSE+YTCVISHGPNP+T  I+DNCIVESC G
Sbjct: 181  QTKDSPRIFTG------MELSEEYTCVISHGPNPRTTHIFDNCIVESCCG 224


>ref|XP_002307593.1| predicted protein [Populus trichocarpa] gi|222857042|gb|EEE94589.1|
            predicted protein [Populus trichocarpa]
          Length = 274

 Score =  160 bits (406), Expect = 4e-37
 Identities = 105/225 (46%), Positives = 135/225 (60%), Gaps = 20/225 (8%)
 Frame = +3

Query: 423  QHSLQSPTNQ--TTPLSSLFASPRFFNGSFRKGSTSSSIFDSETIMSPTSILDSKK-VST 593
            +H  QSP+NQ  T   +S  +SPRF      K  T  ++ ++E +MSPTSILD+ K +  
Sbjct: 3    EHGTQSPSNQNYTKLTTSFLSSPRF------KAFTFKALPEAEPMMSPTSILDTTKPLFP 56

Query: 594  FITPFGYDQNMSKSQNTSSQENKH----LQEKGLGLALVDS----LNDEKDLENFNFIKP 749
            F TPF YD N  KS    S EN+H       KG+G+AL+D     +   K+ +N +F KP
Sbjct: 57   FKTPFSYDINQPKSPKVFS-ENRHSWDKTDSKGIGVALIDDTPNYIKPVKENDN-HFSKP 114

Query: 750  ---------KLKIQIPTLPLSACSPNQSPKCPADFGIKTPNRNSQCPKSPFNGLNSGVQE 902
                     KL++QIP  P S  SP QSPK P DFGIKT + NSQ   S    +NSG+Q 
Sbjct: 115  SNGTVLFGTKLRVQIPPPPNSILSPVQSPKSPGDFGIKT-SMNSQLSAS--GSVNSGIQA 171

Query: 903  NKYLNSPTGALTLSEMELSEDYTCVISHGPNPKTIRIYDNCIVES 1037
                   TG +++SEMELSEDYTCVI+HGPNPKT  I+DNCIVE+
Sbjct: 172  KDSPQVFTGCMSMSEMELSEDYTCVITHGPNPKTTHIFDNCIVEN 216


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  160 bits (404), Expect = 6e-37
 Identities = 107/231 (46%), Positives = 133/231 (57%), Gaps = 21/231 (9%)
 Frame = +3

Query: 402  EKLLMADQHSLQSPTNQ--TTPLSSLFASPRFFNGSFRKGSTSSSIF-DSETIMSPTSIL 572
            ++ LMAD  SL SPT++    P SS F+SPR F G       SS +F ++ET+MSPTSIL
Sbjct: 12   KQALMADCGSLPSPTDKYRRPPSSSFFSSPRLFTGF------SSKVFSETETMMSPTSIL 65

Query: 573  DSKKVSTFITPFGYDQNMSKSQNTSSQEN-KHLQEKGLGLALVDSL-NDEKDLE------ 728
            DSK  S F  PF    +  K      + +   L  + +GL +VD+L +DE D +      
Sbjct: 66   DSKPFSGFRNPFTNTTSTIKPSEPEPRRHWDKLDSRMIGLGIVDALTHDESDPKLSKPES 125

Query: 729  NFNFIKPKLKIQIPTLPLSACSPNQSPKCPADFGIKTPNRN--------SQCP--KSPFN 878
                   +LKIQIP LP S  SP +SPK PADFGIKT N          SQ P  KS F 
Sbjct: 126  RMVLFGSQLKIQIPPLPSSVLSPAESPKSPADFGIKTRNSQLGPFSPCLSQSPAKKSGFG 185

Query: 879  GLNSGVQENKYLNSPTGALTLSEMELSEDYTCVISHGPNPKTIRIYDNCIV 1031
              NSG++        TG L+ +EMELSEDYTCVISHGPNP+T  I+DNCIV
Sbjct: 186  SANSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTHIFDNCIV 236


>ref|XP_002300834.1| predicted protein [Populus trichocarpa] gi|222842560|gb|EEE80107.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  155 bits (392), Expect = 2e-35
 Identities = 106/233 (45%), Positives = 134/233 (57%), Gaps = 20/233 (8%)
 Frame = +3

Query: 402  EKLLMADQHSLQSPTNQ--TTPLSSLFASPRFFNGSFRKGSTSSSIFDSETIMSPTSILD 575
            ++ LM D +S QS +NQ  T P +S   SPRF      K  T   + ++E +MSPTSILD
Sbjct: 12   KQTLMTDHNSAQSTSNQNCTKPTTSFLVSPRF------KAFTFKGLPEAEPVMSPTSILD 65

Query: 576  SKK-VSTFITPFGYDQNMSKSQNTSSQENKHLQEK----GLGLALVD---SLNDEKDLEN 731
            + K    F TPF    N  KS    S E KH  +K    G+GLAL+D   S       EN
Sbjct: 66   TTKPFFPFKTPFSNVINQPKSPKVFS-EYKHSWDKSDSKGIGLALIDDTPSCGKVSIKEN 124

Query: 732  FN-FIKP---------KLKIQIPTLPLSACSPNQSPKCPADFGIKTPNRNSQCPKSPFNG 881
             N F KP         KL++QIP  P S   P +SPK P DFGI+T +RNSQ   SP   
Sbjct: 125  ENHFSKPSNRTVLFGTKLRVQIPPQPNSILFPVESPKSPGDFGIET-SRNSQFSASP--S 181

Query: 882  LNSGVQENKYLNSPTGALTLSEMELSEDYTCVISHGPNPKTIRIYDNCIVESC 1040
            ++SG+Q        TG +++SEMELSEDYTCVI+HGPNP T  I+DNC+VE+C
Sbjct: 182  VHSGIQSKDSPRVFTGCISISEMELSEDYTCVITHGPNPTTTHIFDNCVVENC 234


>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  147 bits (371), Expect = 4e-33
 Identities = 102/235 (43%), Positives = 137/235 (58%), Gaps = 22/235 (9%)
 Frame = +3

Query: 402  EKLLMADQHSLQSPTNQTTPLSSLFASPRFFNG-SFRKGSTSSSIFDSETIMSPTSILDS 578
            +++LMAD  S+ SPT +    +S    PR F G SF+  S ++     E++MSPTSILDS
Sbjct: 12   KQVLMADYSSILSPTEKYRKPTSF---PRLFTGFSFKNFSETT-----ESVMSPTSILDS 63

Query: 579  KKVSTFITPFGYDQNMS-KSQNTSSQEN-KHLQEKGLGLALVDSLNDEKDLENFNFIKPK 752
            K  S F  PF  DQN++ K+Q + ++     L  KG+GLA+VD+LN + D  + N  KP+
Sbjct: 64   KPFSGFRNPFLPDQNLTPKTQESDTKRTWDKLDSKGIGLAIVDALNYD-DKTDSNLSKPE 122

Query: 753  ---------LKIQIPTLPLSACSPNQSPKCPADFGIKTPNR----------NSQCPKSPF 875
                     LKIQ+P LP+S    +QSPK PADFGIKT +           +S   KS  
Sbjct: 123  SRMVLFGSQLKIQVPPLPVSPT--DQSPKSPADFGIKTRHSQLGSSSSGLSHSPVKKSVC 180

Query: 876  NGLNSGVQENKYLNSPTGALTLSEMELSEDYTCVISHGPNPKTIRIYDNCIVESC 1040
               NS +  +       G+L+  EME SEDYTCVIS+GPNPKT  I+D+ IVESC
Sbjct: 181  GSANSSIDTSSSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKTTHIFDDYIVESC 235


Top