BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014571
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   639   0.0  
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   636   e-180
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   635   e-180
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   631   e-178
gb|ABU45209.1| unknown [Solanum bulbocastanum]                        630   e-178

>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  639 bits (1648), Expect = 0.0
 Identities = 324/413 (78%), Positives = 347/413 (84%)
 Frame = -1

Query: 1249 KSKRVSGFDMAPPASEMLGGSGGGAAVAENSWSAFGQIPGTTPTIPGMFPNMFSITSGQF 1070
            KSKR+SGFDMAPP S ML G    A          GQ+PGT P IPGMFPNMF + SGQF
Sbjct: 170  KSKRISGFDMAPPTSAMLPGITAAA----------GQVPGTNPPIPGMFPNMFPLASGQF 219

Query: 1069 GGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAVVN 890
            G LPVMP+QAMTQQATRHARRVYVGGLP  ANEQSVATFFSHVMSAI GNTAGPGDAVVN
Sbjct: 220  GALPVMPIQAMTQQATRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVN 279

Query: 889  VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 710
            VYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGAP KVRRPSDYNPSLAATLGPSQPNPN
Sbjct: 280  VYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPN 339

Query: 709  LNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETGNS 530
            LNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETGNS
Sbjct: 340  LNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 399

Query: 529  KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESXXXXXXXXXXX 350
            KGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQES           
Sbjct: 400  KGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIAL 459

Query: 349  XXLMLQPTSVASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDLVNVVIPRPNPI 170
              LMLQP ++A+KVL LT+V++           DIL DM+TECGKFG LVNVVIPRP+P 
Sbjct: 460  QRLMLQPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPN 519

Query: 169  GEPSAGVGKVFLEYVDTESASKARAGLHGRKFGGNEVVAVFYAENKFQQRDFE 11
            GEP+ GVGKVFLEY D +S+SKAR  L+GRKFGGN+VVAVFY ENKF + D++
Sbjct: 520  GEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDYD 572


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  636 bits (1640), Expect = e-180
 Identities = 324/413 (78%), Positives = 346/413 (83%)
 Frame = -1

Query: 1249 KSKRVSGFDMAPPASEMLGGSGGGAAVAENSWSAFGQIPGTTPTIPGMFPNMFSITSGQF 1070
            KSKRVSGFDMAPPAS ML G+   A          GQIPGTTPTIPGMFPNMF + SGQF
Sbjct: 162  KSKRVSGFDMAPPASAMLAGAAAAADFT-------GQIPGTTPTIPGMFPNMFPLASGQF 214

Query: 1069 GGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAVVN 890
            G LPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFS VMSAI GNTAGPGDAVVN
Sbjct: 215  GALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVN 274

Query: 889  VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 710
            VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN
Sbjct: 275  VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 334

Query: 709  LNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETGNS 530
            LNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETGNS
Sbjct: 335  LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 394

Query: 529  KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESXXXXXXXXXXX 350
            KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG +QPKPEQE+           
Sbjct: 395  KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIAL 454

Query: 349  XXLMLQPTSVASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDLVNVVIPRPNPI 170
              LM QP ++A+KV+CLTQVV            DI+ DM+ E GKFG+LVNV IPRP P 
Sbjct: 455  QRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPN 514

Query: 169  GEPSAGVGKVFLEYVDTESASKARAGLHGRKFGGNEVVAVFYAENKFQQRDFE 11
            GEP+ G+GKVFLEY D + A+KAR GL+GRKF GN+VVAVFY ENKF Q +++
Sbjct: 515  GEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENKFSQGEYD 567


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  635 bits (1638), Expect = e-180
 Identities = 324/413 (78%), Positives = 345/413 (83%)
 Frame = -1

Query: 1249 KSKRVSGFDMAPPASEMLGGSGGGAAVAENSWSAFGQIPGTTPTIPGMFPNMFSITSGQF 1070
            KSKRVSGFDMAPPAS ML G+   A          GQIPGTTPTIPGMFPNMF + SGQF
Sbjct: 162  KSKRVSGFDMAPPASAMLAGAAAAA----------GQIPGTTPTIPGMFPNMFPLASGQF 211

Query: 1069 GGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAVVN 890
            G LPVMPVQAMTQQATRHARRVYVGGL P+ANEQSVATFFS VMSAI GNTAGPGDAVVN
Sbjct: 212  GALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVN 271

Query: 889  VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 710
            VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN
Sbjct: 272  VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN 331

Query: 709  LNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETGNS 530
            LNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETGNS
Sbjct: 332  LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNS 391

Query: 529  KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESXXXXXXXXXXX 350
            KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQG +QPKPEQE+           
Sbjct: 392  KGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIAL 451

Query: 349  XXLMLQPTSVASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDLVNVVIPRPNPI 170
              LM QP ++A+KV+CLTQVV            DI+ DM+ E GKFG+LVNV IPRP P 
Sbjct: 452  QRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPN 511

Query: 169  GEPSAGVGKVFLEYVDTESASKARAGLHGRKFGGNEVVAVFYAENKFQQRDFE 11
            GEP+ G+GKVFLEY D + A KAR GL+GRKF GN+VVAVFY ENKF Q +++
Sbjct: 512  GEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENKFSQGEYD 564


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  631 bits (1628), Expect = e-178
 Identities = 330/419 (78%), Positives = 351/419 (83%), Gaps = 6/419 (1%)
 Frame = -1

Query: 1246 SKRVSGFDMAPPASEML-GGSGGGAAVAENSWSAFGQIPGTTPTIPGMFPNMFSI-TSGQ 1073
            SKR+SGFDMAPP+S +L   +   AA A  S +A GQI GTTP IPGMFPNMF + TS Q
Sbjct: 123  SKRMSGFDMAPPSSAILPNAAAAAAAAAAASAAASGQIAGTTPPIPGMFPNMFPLGTSQQ 182

Query: 1072 FGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAVV 893
            FG LPVMPVQAMTQQATRHARRVYVGGLPP+ANEQSVATFFS VM+AI GNTAGPGDAVV
Sbjct: 183  FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAGPGDAVV 242

Query: 892  NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 713
            NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP
Sbjct: 243  NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 302

Query: 712  NLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETGN 533
            NLNL AVGL PGSAGGLEGPDRIFVGG+PYYFTE QIRELLESFGPLRGFDLVKDRETGN
Sbjct: 303  NLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGN 362

Query: 532  SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESXXXXXXXXXX 353
            SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGT QPKPEQE+          
Sbjct: 363  SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTNQPKPEQENVLLHAQQQIA 422

Query: 352  XXXLMLQP----TSVASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDLVNVVIP 185
               LMLQP      V +KV+CLTQVVT           DIL DM+TE GKFG LVNVVIP
Sbjct: 423  LQRLMLQPQPQQQPVPTKVVCLTQVVTGDELKDDDEYEDILEDMRTEAGKFGLLVNVVIP 482

Query: 184  RPNPIGEPSAGVGKVFLEYVDTESASKARAGLHGRKFGGNEVVAVFYAENKFQQRDFED 8
            RP P GE + GVGKVFLEY DTE +SKARAG++GRKF GN+VVAVFY ENKF Q +++D
Sbjct: 483  RPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKFDGNQVVAVFYPENKFSQGEYDD 541


>gb|ABU45209.1| unknown [Solanum bulbocastanum]
          Length = 558

 Score =  630 bits (1625), Expect = e-178
 Identities = 317/414 (76%), Positives = 348/414 (84%), Gaps = 1/414 (0%)
 Frame = -1

Query: 1249 KSKRVSGFDMAPPASEMLGGSGGGAAVAENSWSAFGQIPGTT-PTIPGMFPNMFSITSGQ 1073
            KSKR+SGFDMAPP S +L G+   A          GQ+PGTT P+IPGMF NMF + +GQ
Sbjct: 154  KSKRISGFDMAPPTSALLSGATDVA----------GQVPGTTNPSIPGMFSNMFPLAAGQ 203

Query: 1072 FGGLPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIAGNTAGPGDAVV 893
            FG LP+MPVQAMTQQATRHARRVYVGGLPP+ANEQSVATFFSHVM AI GNTAGPGDAVV
Sbjct: 204  FGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVV 263

Query: 892  NVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNP 713
            NVYINHEKKFAFVEMRSVEEASNAMALDG++FEG PVKVRRPSDYNPSLAATLGPSQP+P
Sbjct: 264  NVYINHEKKFAFVEMRSVEEASNAMALDGVVFEGGPVKVRRPSDYNPSLAATLGPSQPSP 323

Query: 712  NLNLGAVGLMPGSAGGLEGPDRIFVGGVPYYFTEVQIRELLESFGPLRGFDLVKDRETGN 533
            NLNL AVGL PGS+GGLEGPDRIFVGG+PYYFTE QIRELLESFG LRGFDLVKDRETGN
Sbjct: 324  NLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGN 383

Query: 532  SKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQESXXXXXXXXXX 353
            SKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRRANQGTTQP PEQES          
Sbjct: 384  SKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIA 443

Query: 352  XXXLMLQPTSVASKVLCLTQVVTXXXXXXXXXXXDILADMKTECGKFGDLVNVVIPRPNP 173
                MLQP ++A+KVLCLT+VV+           DIL DM+ ECGKFG L+NVVIPRPNP
Sbjct: 444  LQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNP 503

Query: 172  IGEPSAGVGKVFLEYVDTESASKARAGLHGRKFGGNEVVAVFYAENKFQQRDFE 11
             GEP+ G+GKVFLEY D +S+SKAR GL+GRKFGGN+V+AVFY ENKF + D+E
Sbjct: 504  NGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYE 557