BLASTX nr result

ID: Bupleurum21_contig00014566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014566
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicu...   107   5e-21
ref|XP_002511100.1| Auxin response factor, putative [Ricinus com...   106   9e-21
ref|XP_002273523.1| PREDICTED: uncharacterized protein LOC100242...   105   2e-20
emb|CBI30449.3| unnamed protein product [Vitis vinifera]              101   2e-19
ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, par...   101   3e-19

>ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
           gi|85069279|gb|ABC69711.1| auxin response factor 2
           [Solanum lycopersicum]
          Length = 846

 Score =  107 bits (266), Expect = 5e-21
 Identities = 53/79 (67%), Positives = 64/79 (81%), Gaps = 5/79 (6%)
 Frame = -3

Query: 224 YADRNDDVRP-SVTAPATKG----EADAALYTELWRACAGPLVSVPRERDLVYYFPQGHI 60
           Y++ +D  RP S T  ++ G    +AD ALYTELWR+CAGPLV+VPRE +LVYYFPQGHI
Sbjct: 11  YSEPSDGSRPVSETGRSSSGVGIVDADTALYTELWRSCAGPLVTVPREGELVYYFPQGHI 70

Query: 59  EQVEASNNQVAEQQMPVYN 3
           EQVEAS NQVA+QQMP+YN
Sbjct: 71  EQVEASTNQVADQQMPLYN 89


>ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
           gi|223550215|gb|EEF51702.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 844

 Score =  106 bits (264), Expect = 9e-21
 Identities = 51/83 (61%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
 Frame = -3

Query: 242 KGLSSRYADRN---DDVRPSVTAPATKGEADAALYTELWRACAGPLVSVPRERDLVYYFP 72
           +  SS Y++ N   +  +   T P +  +A+ ALYTELW ACAGPLV+VPRE +LVYYFP
Sbjct: 19  ESFSSSYSEPNVAMEGQKGHSTRPVSAKDAEKALYTELWNACAGPLVTVPRENELVYYFP 78

Query: 71  QGHIEQVEASNNQVAEQQMPVYN 3
           QGHIEQVEAS NQ+A+QQMPVYN
Sbjct: 79  QGHIEQVEASTNQLADQQMPVYN 101


>ref|XP_002273523.1| PREDICTED: uncharacterized protein LOC100242619 [Vitis vinifera]
          Length = 504

 Score =  105 bits (262), Expect = 2e-20
 Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 2/181 (1%)
 Frame = +2

Query: 407 QAPSRMLNLGEIIDEYVSLKGQKVVLDEEKRCLEDEKLRVENLLSGMQNVLDGYNTGIXX 586
           +AP  +L+LG ++DEY+SLK QKV+L+ EK  L+ EK RV+ LL GMQ+ ++ YN G   
Sbjct: 58  EAPKSLLSLGAMLDEYISLKEQKVMLEREKIRLDQEKFRVQTLLQGMQDAMNAYNAG--G 115

Query: 587 XXXXXXXXXXXXNSGALVSHGNIAAGSSSGFPVYHNSVVMSASKPTPA--NPGNFSTPMT 760
                        S A+V   +   G  SG+  Y++ VV     P+ A   P NFSTP+T
Sbjct: 116 STPNSMIPALGTKSTAVVHQLDPNVGPFSGYHAYNSPVVTPLPMPSNAIVEPANFSTPIT 175

Query: 761 YASTSKRRKGSKDVTDGPNTTKRSRSQSATKHLQANCSYTTPPLSNANTTLQNSTVNASS 940
              ++K+RK  K V D P  TKRSR +  TK L    + T     +A    +N    +++
Sbjct: 176 NHLSAKKRKDVKAVPDAPPPTKRSRGKLPTKPLPTKGNDTLSQSIDAVNGPENIKQFSAA 235

Query: 941 C 943
           C
Sbjct: 236 C 236


>emb|CBI30449.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  101 bits (252), Expect = 2e-19
 Identities = 74/193 (38%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
 Frame = +2

Query: 407 QAPSRMLNLGEIIDEYVSLKGQKVVLDEEKRCLEDEKLRVENLLSGMQNVLDGYNTGIXX 586
           +AP  +L+LG ++DEY+SLK QKV+L+ EK  L+ EK RV+ LL GMQ+ ++ YN G   
Sbjct: 58  EAPKSLLSLGAMLDEYISLKEQKVMLEREKIRLDQEKFRVQTLLQGMQDAMNAYNAG--G 115

Query: 587 XXXXXXXXXXXXNSGALVSHGNIAAGSSSGFPVYHNSVVMSASKPTPA--NPGNFSTPMT 760
                        S A+V   +   G  SG+  Y++ VV     P+ A   P NFSTP+T
Sbjct: 116 STPNSMIPALGTKSTAVVHQLDPNVGPFSGYHAYNSPVVTPLPMPSNAIVEPANFSTPIT 175

Query: 761 YASTSKRRKGSKDVTDGPNTTKRSR-----SQSA--------TKHLQANCSYTTPPLSNA 901
              ++K+RK  K V D P  TKRSR     SQS          K   A CS      S  
Sbjct: 176 NHLSAKKRKDVKAVPDAPPPTKRSRGNDTLSQSIDAVNGPENIKQFSAACS------SPH 229

Query: 902 NTTLQNSTVNASS 940
           N  L  S V  SS
Sbjct: 230 NRLLGGSVVQGSS 242


>ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
          Length = 718

 Score =  101 bits (251), Expect = 3e-19
 Identities = 50/86 (58%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = -3

Query: 254 QLSTKGLSSRYADRNDDVRPSVTAP--ATKGEADAALYTELWRACAGPLVSVPRERDLVY 81
           ++S    S+ + D  D  + +   P   +  +AD ALYTELW ACAGPLVSVPRE + V+
Sbjct: 5   EVSINPNSASFNDHADSTKDTSDPPNALSPRDADIALYTELWNACAGPLVSVPRENERVF 64

Query: 80  YFPQGHIEQVEASNNQVAEQQMPVYN 3
           YFPQGHIEQVEAS +QVA+QQMPVYN
Sbjct: 65  YFPQGHIEQVEASTSQVADQQMPVYN 90


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