BLASTX nr result

ID: Bupleurum21_contig00014560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014560
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518112.1| conserved hypothetical protein [Ricinus comm...   207   1e-51
ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   205   6e-51
ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
gb|ABK94153.1| unknown [Populus trichocarpa]                          204   1e-50
ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycin...   202   4e-50

>ref|XP_002518112.1| conserved hypothetical protein [Ricinus communis]
           gi|223542708|gb|EEF44245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score =  207 bits (528), Expect = 1e-51
 Identities = 99/124 (79%), Positives = 104/124 (83%)
 Frame = -1

Query: 642 AGRLSQVASRIMAGNGVVAXXXXXXXXXXXXXXLPVGKHIVPDKPLSMNDELTWDNGTPF 463
           AGRLS VASRIM GNGVV+              LPVGKHIVPDKPL +N+EL WDNGTPF
Sbjct: 3   AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPF 62

Query: 462 PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKMPYTPKVYPYDNLRVEL 283
           PEPCIDRIADTVGKYEALAWLCGGLSFFASLGL+AVWNDKASK+PY PKVYPYDNLR EL
Sbjct: 63  PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVYPYDNLRAEL 122

Query: 282 GGEP 271
           GGEP
Sbjct: 123 GGEP 126


>ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial isoform 1 [Vitis vinifera]
          Length = 125

 Score =  205 bits (522), Expect = 6e-51
 Identities = 97/125 (77%), Positives = 107/125 (85%)
 Frame = -1

Query: 645 MAGRLSQVASRIMAGNGVVAXXXXXXXXXXXXXXLPVGKHIVPDKPLSMNDELTWDNGTP 466
           MAGRLS VASRIM G+GVV+              LPVGKHIVP+KPL +NDEL WDNGTP
Sbjct: 1   MAGRLSNVASRIMGGSGVVSRSVASSLPLRSGMGLPVGKHIVPNKPLPVNDELIWDNGTP 60

Query: 465 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKMPYTPKVYPYDNLRVE 286
           FPEPCIDRIA+TVGKYEALAW+CGGLSFFASLGL+AVWNDKASK+P+TP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFTPRVYPYDNLRVE 120

Query: 285 LGGEP 271
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|222871151|gb|EEF08282.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  204 bits (520), Expect = 1e-50
 Identities = 97/125 (77%), Positives = 104/125 (83%)
 Frame = -1

Query: 645 MAGRLSQVASRIMAGNGVVAXXXXXXXXXXXXXXLPVGKHIVPDKPLSMNDELTWDNGTP 466
           MAGRLS VASRIM GNGVV+              LPVGKHIVPDKP+S+NDELTWDNGT 
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 465 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKMPYTPKVYPYDNLRVE 286
           FPEPCIDRIADTVGKYEALAWLCGGL FFASLGL+ VWNDKAS +P+ PKVYPYDNL+VE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 285 LGGEP 271
           LGGEP
Sbjct: 121 LGGEP 125


>gb|ABK94153.1| unknown [Populus trichocarpa]
          Length = 125

 Score =  204 bits (520), Expect = 1e-50
 Identities = 97/125 (77%), Positives = 104/125 (83%)
 Frame = -1

Query: 645 MAGRLSQVASRIMAGNGVVAXXXXXXXXXXXXXXLPVGKHIVPDKPLSMNDELTWDNGTP 466
           MAGRLS VASRIM GNGVV+              LPVGKHIVPDKP+S+NDELTWDNGT 
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLSSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 465 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKMPYTPKVYPYDNLRVE 286
           FPEPCIDRIADTVGKYEALAWLCGGL FFASLGL+ VWNDKAS +P+ PKVYPYDNL+VE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 285 LGGEP 271
           LGGEP
Sbjct: 121 LGGEP 125


>ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycine max]
           gi|255626255|gb|ACU13472.1| unknown [Glycine max]
          Length = 125

 Score =  202 bits (515), Expect = 4e-50
 Identities = 97/125 (77%), Positives = 103/125 (82%)
 Frame = -1

Query: 645 MAGRLSQVASRIMAGNGVVAXXXXXXXXXXXXXXLPVGKHIVPDKPLSMNDELTWDNGTP 466
           MAGRL+  ASRI+ GNGVV               LPVGKH VPDKPL MN+EL WDNGT 
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 465 FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLMAVWNDKASKMPYTPKVYPYDNLRVE 286
           FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGL+AVWNDKASK+P+TPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 285 LGGEP 271
           LGGEP
Sbjct: 121 LGGEP 125


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