BLASTX nr result

ID: Bupleurum21_contig00014524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014524
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533810.1| nuclear receptor binding set domain containi...   139   3e-31
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...   129   3e-28
ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
emb|CBI17411.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containin...    58   7e-07

>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
            putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
            nuclear receptor binding set domain containing protein 1,
            nsd, putative [Ricinus communis]
          Length = 1586

 Score =  139 bits (349), Expect = 3e-31
 Identities = 77/161 (47%), Positives = 100/161 (62%), Gaps = 4/161 (2%)
 Frame = +1

Query: 1    LPSPTPKTGIECQNELDDRTRQSVTVNLPCQDIGPKWSNTSSIVVGELQLADISGDWGGY 180
            LPSPTPK   E + +     + SV+ + P QD GP WS  SS+VVG  QL +++G+WGGY
Sbjct: 1098 LPSPTPKQSHE-ELKGQAENKLSVSSSAPVQDSGPSWSTASSLVVGR-QLPEVAGEWGGY 1155

Query: 181  SPTPAEHSVNEWHSSLISLPSIKPTEGLCDRFSTAAS----TSGEXXXXXXXXXXXWQTA 348
            SP  A+ SV EW S+L+S+ S+KPTEG  D  +T  S     +             WQ  
Sbjct: 1156 SPASAKPSVEEWDSNLVSVSSLKPTEGANDHAATPTSGTDKLTNSSPPQPELDTSTWQPL 1215

Query: 349  ICEPIEFSTLAEESVSDLLAEVDAMESRRGLASPTSVVNCG 471
            + EP EF +L +ESVSDLLAEV+AMES  GL SPTS ++CG
Sbjct: 1216 VPEPNEFCSLVDESVSDLLAEVEAMESLGGLPSPTSKMSCG 1256


>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
            vinifera]
          Length = 1643

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/161 (45%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +1

Query: 1    LPSPTPKTGIECQNELDDRTRQSVTVNLPCQDIGPKWSNTSSIVVGELQLADISGDWGGY 180
            LPSPTPK            ++QSV+ ++P QD GP WS  SS+V G  +L +++ DWGGY
Sbjct: 1213 LPSPTPKPSDGDWKGQAAESKQSVSSDVPVQDSGPSWSTASSLVGGGTKLPEVASDWGGY 1272

Query: 181  S-PTPAEHSVNEWHSSLISLPSIKPTEGLCDRFSTAASTSGEXXXXXXXXXXX----WQT 345
            S PTP + SV EW S+L S+ S+KPTE   D  +T  S S +               WQ 
Sbjct: 1273 SSPTPMKPSVEEWDSTLASVSSLKPTEVASDHAATPTSESVQLTHSSPPYPTPNASSWQP 1332

Query: 346  AICEPIEFSTLAEESVSDLLAEVDAMESRRGLASPTSVVNC 468
                P E S++ E SVSDLLAEV+AMES  GL SPTSV+ C
Sbjct: 1333 IDTGPTEISSVTEASVSDLLAEVEAMESLDGLPSPTSVMKC 1373


>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
            predicted protein [Populus trichocarpa]
          Length = 1256

 Score =  125 bits (314), Expect = 4e-27
 Identities = 72/156 (46%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
 Frame = +1

Query: 1    LPSPTPKTGIECQNELDDRTRQSVTVNLPCQDIGPKWSNTSSIVVGELQLADISGDWGGY 180
            LPSPTPK  ++           S++  LP  D G  WS  SS+VVG   LA ++G+WGGY
Sbjct: 877  LPSPTPKQHLKDLKGHTAENNHSISSKLPVLDSGCSWSTASSLVVGGATLARVAGEWGGY 936

Query: 181  SPTPAEHSVNEWHSSLISLPSIKPTEGLCDRFSTAASTSG----EXXXXXXXXXXXWQTA 348
            SP P +  V EW S+ +S  S+KPT+G  D  ST    SG                WQ  
Sbjct: 937  SPAPVK-PVEEWDSNHVSASSLKPTDGGSDHASTQTPDSGPLAHSPSTHPVIDASDWQRI 995

Query: 349  ICEPIEFSTLAEESVSDLLAEVDAMESRRGLASPTS 456
            I EP EF +L +ESVSDLLAEV+AMES  GL SPTS
Sbjct: 996  IPEPTEFCSLVDESVSDLLAEVEAMESLGGLPSPTS 1031


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
 Frame = +1

Query: 181  SPTPAEHSVNEWHSSLISLPSIKPTEGLCDRFSTAASTSGEXXXXXXXXXXX----WQTA 348
            SPTP + SV EW S+L S+ S+KPTE   D  +T  S S +               WQ  
Sbjct: 1054 SPTPMKPSVEEWDSTLASVSSLKPTEVASDHAATPTSESVQLTHSSPPYPTPNASSWQPI 1113

Query: 349  ICEPIEFSTLAEESVSDLLAEVDAMESRRGLASPTSVVNC 468
               P E S++ E SVSDLLAEV+AMES  GL SPTSV+ C
Sbjct: 1114 DTGPTEISSVTEASVSDLLAEVEAMESLDGLPSPTSVMKC 1153


>ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
            [Cucumis sativus] gi|449515257|ref|XP_004164666.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            44-like [Cucumis sativus]
          Length = 1201

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
 Frame = +1

Query: 7    SPTPKTGIECQNELDDRTRQSVTVNLPCQDIGPKWSNTSSIVVGELQLADISGDWG-GYS 183
            +P P TG       D   +QS + ++  Q+ GP WS+              +G WG GY 
Sbjct: 1036 APKPMTG-------DVDIKQSASSSVLVQNSGPSWSS--------------AGGWGDGYM 1074

Query: 184  PTPAEHSVNEWHSSLISLPSIKPTEGLCDRFSTAASTSGEXXXXXXXXXXXWQTAICEPI 363
              P    + + +SS      +K ++ + D  +T A+ +             W     +  
Sbjct: 1075 AAPGR-PIEDLNSSF----GLKSSDIIDDHETTGATIN-------------WGAIDDDSN 1116

Query: 364  EFSTLAEESVSDLLAEVDAMESRRGLASPTSVVNC 468
            +F++L +ESVSDLLAEV+AME   GLAS  S++NC
Sbjct: 1117 DFNSLVDESVSDLLAEVEAMECLSGLASSASMMNC 1151


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